LOCUS       NM_001013899            2275 bp    mRNA    linear   ROD 10-DEC-2024
DEFINITION  Rattus norvegicus ubiquilin-like (Ubqlnl), mRNA.
ACCESSION   NM_001013899 XM_219040
VERSION     NM_001013899.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2275)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2275)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC083634.1.
            
            On Apr 20, 2005 this sequence version replaced XM_219040.3.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC083634.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2275
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q32"
     gene            1..2275
                     /gene="Ubqlnl"
                     /gene_synonym="RGD1307202"
                     /note="ubiquilin-like"
                     /db_xref="GeneID:293287"
                     /db_xref="RGD:1307202"
     exon            1..2250
                     /gene="Ubqlnl"
                     /gene_synonym="RGD1307202"
                     /inference="alignment:Splign:2.1.0"
     CDS             212..2050
                     /gene="Ubqlnl"
                     /gene_synonym="RGD1307202"
                     /codon_start=1
                     /product="ubiquilin-like protein"
                     /protein_id="NP_001013921.1"
                     /db_xref="GeneID:293287"
                     /db_xref="RGD:1307202"
                     /translation="MPHIISRSPRMPQSRHPAGVPADGNIPPGVIRVIVKTPGNQNVF
                     TVAEDTSVRQFKEQLSSHFKCQMEQLVLVSMGRLLKDHDTLSQRGITDGHTIHVVIKS
                     KHGSRSLTHSFRNLLTNNPCHQDRNPKGNSSTVCQSAGMSETKVESSILMEPDASKVC
                     TQDPEVGSPEQIEQMLETLCVQRLLSNMFFMHQLPPEHPDMQDLIQQNPEVSHLLDNS
                     EILCQTLELARHLAIIQEIMQIQQPAQNPEHTLNPQPYLGLETIPNGNIVLGQGYDNF
                     NDHMLNGVHVHDLLEDDSFTALLAEQVLEQVQTPSLCQPPPQEQWGQLSSSQVIFANS
                     CGFLTTPTEANLNTTNNASRENPAIAATQGQSNVCAVQQPTEIPSLCTIPVIQEPREG
                     DKDTTIPQGSSAQWLEEDLQQSEEQSSSQITRSMIQLLRTHPHMAAEMLLLLNPPQLN
                     EQWRQQTATPLQSSQLSDLLLALANPKTSQALLQIEHGLQLLATEAPALLPYIEPYLW
                     GLGWLIPSSCDYLDTVPWTWNVQDTVEPQCPESCHKSGTVLQREQPLSGDSSHSLQAP
                     EVRFSKEMECLQAMGFVNYNANLQALIATDGDTNAAIHKLKASQGF"
ORIGIN      
        1 cagctgggcc acatctggag aattggggtg agggttcaac atcgaataat tctggctttt
       61 gcccattcat gccttttagg ggcatcaaga aaaattaacc tatgacctca gaacacaaca
      121 cctgcaacga aggccagcag gaccacttgc ctgccctcac ctccctaccc ctgcttctgc
      181 ctaatctcca tctgactatc cactaaggtc tatgccgcat attatctctc ggtcacctag
      241 gatgccccag agcaggcatc ctgcaggtgt gcctgcagat gggaatatcc ctccaggtgt
      301 cattcgagtg attgtgaaga ctccaggcaa ccagaacgtc tttacagtag ctgaagacac
      361 ctcagtgaga caattcaagg aacaactgtc ttctcacttc aaatgccaaa tggaacaact
      421 ggtactggtg tccatgggcc gcctcctaaa agaccatgac acactgagcc agaggggcat
      481 cacagatggc cacaccatcc atgtcgtcat caaatccaag catggctcca ggtccctgac
      541 tcactctttc cggaacctgt taaccaacaa tccgtgccat caagacagaa accccaaagg
      601 aaatagcagc acagtgtgcc aatctgcagg catgagtgaa accaaagtgg aatcatccat
      661 tctcatggag ccggatgcat ccaaggtgtg tactcaagac ccggaagtgg gtagtccaga
      721 gcagattgaa cagatgctgg agactctttg tgtccagaga ctgctgtcta atatgttctt
      781 catgcatcag ctgcccccag aacacccaga tatgcaagat ctgatacagc agaacccaga
      841 agtttcccat ctccttgaca attctgagat cctatgccag actctggagc tggctaggca
      901 ccttgccatc atccaagaga taatgcagat ccagcagcca gcacagaacc ctgagcatac
      961 actgaaccca cagccatact tgggcttgga gacaattcca aatggaaaca ttgtcctagg
     1021 ccagggctat gacaatttca atgaccacat gctcaatggt gtgcatgtgc atgatctttt
     1081 ggaggacgac tcttttacag ctcttctggc tgaacaagta ctagaacaag tccagactcc
     1141 ttcgctatgt caaccaccac cccaagaaca atggggccag ctctcttctt cccaagtcat
     1201 ttttgcaaat tcttgtggat ttttaactac cccaacagag gctaatctaa acaccaccaa
     1261 caatgcttcc agggaaaatc cagccatagc tgccacccag ggccaaagca atgtctgtgc
     1321 tgttcagcag ccaactgaga tcccatcctt atgcaccata ccagtcatcc aggagcctcg
     1381 agaaggcgat aaggatacta ccatccctca agggagctct gcccagtggt tagaggaaga
     1441 tctccagcag tcagaagagc agtccagttc tcagatcaca agaagcatga tccagttgct
     1501 taggacccac ccacacatgg cagctgagat gctgctgctt ttgaatccgc ctcaactgaa
     1561 tgagcagtgg aggcagcaaa ctgccacacc cttgcagtcg tcccagcttt ctgacttgct
     1621 tttagcccta gccaacccca aaacatcgca agcactatta caaattgagc atggtctgca
     1681 gctattggct acagaggctc ctgccctttt accctacatt gaaccttacc tatggggtct
     1741 gggttggctt attccttcca gctgtgacta ccttgataca gtgccctgga cttggaatgt
     1801 gcaagacaca gttgagcctc agtgtcctga aagttgccac aaatctggaa cagtccttca
     1861 gagagaacag cctctgtctg gagactcttc ccattcccta caagcccccg aggttcgttt
     1921 cagcaaagag atggaatgtc ttcaggccat gggatttgtg aattataatg ccaacttgca
     1981 agctctcatt gctactgatg gtgacactaa tgctgctatt cacaaactca aggcttctca
     2041 gggattctaa ccattatgtc tccccatctg ctttctactg catgctgacc catctgacca
     2101 cttcacctgc ctttcctacc tttcctgatg tttccaactg ggagcagccc tggaacagga
     2161 gaaaccaatc aatcttgctc aactgaatac tagcttactg gtcatggctg gaagaactgt
     2221 caataaaatg gctacactta cttgccttca aaaaaaaaaa aaaaaaaaaa aaaaa
//
