LOCUS       NM_001033997            3686 bp    mRNA    linear   ROD 12-JUN-2023
DEFINITION  Rattus norvegicus U-box domain containing 5 (Ubox5), mRNA.
ACCESSION   NM_001033997 XM_215839
VERSION     NM_001033997.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3686)
  AUTHORS   Hatakeyama S, Yada M, Matsumoto M, Ishida N and Nakayama KI.
  TITLE     U box proteins as a new family of ubiquitin-protein ligases
  JOURNAL   J Biol Chem 276 (35), 33111-33120 (2001)
   PUBMED   11435423
REFERENCE   2  (bases 1 to 3686)
  AUTHORS   Pringa E, Martinez-Noel G, Muller U and Harbers K.
  TITLE     Interaction of the ring finger-related U-box motif of a nuclear dot
            protein with ubiquitin-conjugating enzymes
  JOURNAL   J Biol Chem 276 (22), 19617-19623 (2001)
   PUBMED   11274149
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC101912.1.
            
            On Oct 9, 2005 this sequence version replaced XM_215839.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC101912.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3686
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q36"
     gene            1..3686
                     /gene="Ubox5"
                     /gene_synonym="RGD1305440"
                     /note="U-box domain containing 5"
                     /db_xref="GeneID:296161"
                     /db_xref="RGD:1305440"
     exon            1..91
                     /gene="Ubox5"
                     /gene_synonym="RGD1305440"
                     /inference="alignment:Splign:2.1.0"
     exon            92..262
                     /gene="Ubox5"
                     /gene_synonym="RGD1305440"
                     /inference="alignment:Splign:2.1.0"
     exon            263..357
                     /gene="Ubox5"
                     /gene_synonym="RGD1305440"
                     /inference="alignment:Splign:2.1.0"
     CDS             304..1920
                     /gene="Ubox5"
                     /gene_synonym="RGD1305440"
                     /EC_number="2.3.2.27"
                     /codon_start=1
                     /product="RING finger protein 37"
                     /protein_id="NP_001029169.1"
                     /db_xref="GeneID:296161"
                     /db_xref="RGD:1305440"
                     /translation="MVINLCLPQFRPRIHCNKVSADGYEVENLISEDLIKRSHGFRTE
                     YFIRPPIYVTVSFPFNVEICRVNIDLTAGGCQNVTGLELYTSALSSRAPQDAQDCWTT
                     GLSETSVPDKEAFTLVGKVLLKNQNHVVFSHRGFKARPPFSPMEVTLLSPAVVAQDLW
                     NKGAFSLSHVAHLKIGITHVTGSGISCIKRLEVWGQPARTCSQEVINSILSTASESPS
                     QDLGLHTPALPMESDYDPGGQSEGQQSPCTLQDMSEVVQDVPEEFLDPITLEIMPCPM
                     LLPSGKVIDQSTLEKCNLSEAAWGRVPSDPFTGLAFTPQSQPLPHPSLKARIDRFLLQ
                     HSISGCHLLGRAQTASAMTPSIITLPSRKRKTGQAEHSSDYSLGMKASSSATSPLLSP
                     TTSEPTAKKMKGASELGLTDMDCSAGPVSHEQKLSQSLEIALTSTLGSMPSFTARLTK
                     GQLQLGTRGSSACRRPATSSELPRSAGPECASCRRVFSSYTTNEPVYQLPCGHLLCRP
                     CLSEKQRSQPMMCTACQQPVTSQDVLRVHF"
     exon            358..1555
                     /gene="Ubox5"
                     /gene_synonym="RGD1305440"
                     /inference="alignment:Splign:2.1.0"
     exon            1556..1714
                     /gene="Ubox5"
                     /gene_synonym="RGD1305440"
                     /inference="alignment:Splign:2.1.0"
     exon            1715..3658
                     /gene="Ubox5"
                     /gene_synonym="RGD1305440"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggttgtggag cggttgatgc gggagtctgt atattgactt acctggtgcg gccagggact
       61 ggagttaggg cgctaccctc gtgggtttca ggtgaggatc ccatctactc ttctgagaaa
      121 gctatcgggt agtagtatgg gataggacct gccgcagtcc ccaaagatac cagatggaag
      181 gcaagaaatg acgctgaggc tgatgacaaa gataatttaa tgcagatgaa gtgaatagtc
      241 tctatgtatt cctttcaact cagctgtttc tgatgctcgg aagctgttct ttcatccaca
      301 aagatggtaa taaatctttg cctccctcag ttcagaccaa gaattcactg caacaaggtg
      361 tcagctgatg gttatgaagt agaaaatctc atctctgaag acctcataaa gagaagccat
      421 ggctttagga cagaatattt cattagacct ccaatctacg tgacagtttc ctttcccttt
      481 aatgtggaga tctgtagggt taacatagat ctcacagctg ggggatgtca gaatgtcact
      541 ggcctggaat tatatacttc tgccttatct agcagagccc ctcaggatgc acaggactgc
      601 tggactacag gtctgagcga gacatctgtc ccagacaagg aggccttcac cttggtaggc
      661 aaagtcttac tgaaaaacca gaaccatgta gtgttcagtc acaggggctt caaggccagg
      721 ccacctttca gtccaatgga agtcacactc ctctctcctg ctgttgtagc gcaggatctc
      781 tggaataaag gggctttttc cctcagccat gtggcccacc tcaagatcgg catcacccat
      841 gtgacaggca gtggcatctc ttgcatcaag cgtttagagg tgtggggtca gccagccagg
      901 acctgctctc aggaggtgat aaatagcatc ttgtcgacag cctcagaaag cccttctcag
      961 gacttgggtc tgcacactcc agccttgccc atggagagtg actatgaccc tgggggtcaa
     1021 tctgagggcc agcagtctcc ctgtacctta caggacatgt ctgaggtcgt tcaagacgtg
     1081 ccagaggagt tcctggatcc tatcaccctg gagatcatgc cgtgccccat gcttctgccc
     1141 tcgggcaagg tcattgacca gagcactctg gagaagtgta acctcagtga agctgcttgg
     1201 ggccgagtgc ccagtgaccc tttcacaggg ttagccttta ctccacagtc ccagccccta
     1261 cctcatcctt ccttaaaggc ccggatcgac cgtttcctac tccaacactc tatttcaggc
     1321 tgccacctgc ttgggagagc acagactgca tcagcaatga ccccttctat catcactctg
     1381 ccctcaagga aaaggaagac agggcaggct gagcacagct cagactatag tcttggcatg
     1441 aaggcttctt cctctgccac aagcccttta ctctcaccta ctacctcaga gccgactgcc
     1501 aagaagatga aaggtgccag cgaactgggc ctgacagaca tggactgttc agcaggtccc
     1561 gtgtcccatg agcagaagct gtcgcaaagt ctggaaattg ccctgacttc cacccttggc
     1621 tccatgcctt ccttcactgc ccggctcacc aaggggcagc tccagctggg cacaagaggg
     1681 agcagtgctt gcaggaggcc agccaccagc tccgagcttc caaggagtgc tggcccagag
     1741 tgtgcctcct gcagacgagt gttttcttcc tacaccacca atgagcctgt gtaccagctg
     1801 ccctgtggcc accttctgtg ccgaccctgc ctgagtgaga agcaacgttc ccagcccatg
     1861 atgtgcacag cctgccagca gccggtcacc agccaggatg tgctgcgggt ccatttttga
     1921 gtgatgagcc tcaactgatt aaaccccatt tgggagggag actgaagatg aaggaagcag
     1981 gaacagggtc ccagtgcctc tgttctctcc tgggcttgaa tacctcatgg tgtgttatgg
     2041 ggactgggta gggacaccct actcctgctt aggcaacaac aggatgacaa agccataggg
     2101 ctgggctggg gaaaacaccc tcttctcctt ggcctacctt gccactaccc aaccagagcc
     2161 agccccaact gttcaggagc actccctgat gtccccatgt tttctgcata caaccttcta
     2221 atggagtttt gtgacttggg acctcacaca gccttctctg cctcagggtc actcagaagt
     2281 ggaccatggt agcggctgtt aagcacatga cttagccgtg tgtaccccca cccctgcaga
     2341 cacttgcagc cttaataaag tgacagttga cgttcaagga ttcctcctgg acacaggaca
     2401 ggacagccac atgcagttgc agccactggg taggcagagg ttcagattta tccagtgtgg
     2461 gtgcgtcagt gccagtggag ggcaagtagc ttccttcaga ccaggtgcca gagttgctcc
     2521 aagggagaga atccctgttc catatggagc ctgcgggagg aaaatgggaa gtgtctttaa
     2581 tgaagtctgt ctgtgtgggc acacatggtg tgcctatgga agtcagtgct ccaggaatca
     2641 gctccctttc caactgtatg gctcccaaaa cctcaggaca tcagtgatgt ggctgtgact
     2701 actgtctgaa ccatctcctg ggatccctag gctacgtttt ttcctttcaa aattaaacct
     2761 tatggagtct caaagaaata gactgcatat agctctgttg gccctgtcaa gagcttccag
     2821 ccaggaggag ggcacctgtg tggtcctcac actggcccac tccctttcag gcagtctgct
     2881 ctgtttctga ggtgactcag cccttgagcc acatgtttgt tgtctcctct ggttgcccag
     2941 aactcagtcc tgagatttag ggaatgtgct ttcagatgtc aggagatgtg tccatagagg
     3001 tagccggtgg ggacatcaac tcctctctcc tacacaccac cagtgcctgt tgttcttcag
     3061 ctttgtgtga caccagggtc tgtatggaca gaccaccccg ccttgcctgg tggctcctgc
     3121 acatcccact ctacgcctca gcctcccttc taggtgtgtg ttcttagctt gtgcaactac
     3181 agagggcgtg gtttgtggct cagcccctac ccataacctg ccatggtgtc cagaatagcc
     3241 agccatggtc tccgagtagc ctactttcct ctgtgtgagt actgggagcc atccctgccc
     3301 tccactccca agagccccca agttacctct ctgcagctct accagaggtg cctggcctac
     3361 tctgctggaa aactaggcct gggagcccct ggtgtgggct ggagaagccc tgggggctgg
     3421 ggcagggagc catcccctca ccgtaaatgt gattacgttt tctcttaaag atcagacccc
     3481 tagccgcatg gaagtgctct ttctccatcc ctaccagaaa cattgtgatt ttccctagca
     3541 tacatgagtg aaagctgggt gtggtgtaac atctgaagga ctgctgtgag ttcaaggtca
     3601 gcctgggcta catagcaaac acttgtctca aagacactga aataaaaatg tatttggcaa
     3661 aaaaaaaaaa aaaaaaaaaa aaaaaa
//
