LOCUS       NM_001134553            5101 bp    mRNA    linear   ROD 09-FEB-2025
DEFINITION  Rattus norvegicus ubinuclein 2 (Ubn2), mRNA.
ACCESSION   NM_001134553 XM_001066467 XM_231617
VERSION     NM_001134553.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5101)
  AUTHORS   Pieragostino,D., Agnifili,L., Fasanella,V., D'Aguanno,S.,
            Mastropasqua,R., Di Ilio,C., Sacchetta,P., Urbani,A. and Del
            Boccio,P.
  TITLE     Shotgun proteomics reveals specific modulated protein patterns in
            tears of patients with primary open angle glaucoma naive to therapy
  JOURNAL   Mol Biosyst 9 (6), 1108-1116 (2013)
   PUBMED   23580065
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473959.1.
            
            On or before Sep 4, 2008 this sequence version replaced
            XM_001066467.1, XM_231617.4.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132271,
                              SAMD00132291 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..5101
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q23"
     gene            1..5101
                     /gene="Ubn2"
                     /gene_synonym="RGD1310722"
                     /note="ubinuclein 2"
                     /db_xref="GeneID:312248"
                     /db_xref="RGD:1310722"
     exon            1..670
                     /gene="Ubn2"
                     /gene_synonym="RGD1310722"
                     /inference="alignment:Splign:2.1.0"
     CDS             245..4237
                     /gene="Ubn2"
                     /gene_synonym="RGD1310722"
                     /codon_start=1
                     /product="ubinuclein-2"
                     /protein_id="NP_001128025.1"
                     /db_xref="GeneID:312248"
                     /db_xref="RGD:1310722"
                     /translation="MAEPRRVAFISLSPVRRREADFAGAEREPPRLEPQPYREPARAE
                     PAPRADAQPPARDKPLPQREVSRAEPPMALQREPPRPEPPPPPLPLQTPPPRESASRA
                     EPPPRPPKETVRLELVLKDPTDESCVEFSYPELLLCGEQRKKLVHTEDPFTDEHKERQ
                     EVEMLAKKFEMKYGGKARKHRKDRLQDLIDIGFGYDETDPFIDNSEAYDELVPASLTT
                     KYGGFYINTGTLQFRQASDTEEDDFTDNQKHKPPKVPKIKDDDIEAKKRKRKEEGEKE
                     KKPRKKVPKQLGVVALNSHKSEKKKKRYKDSLSLAAMIRKFQKEKDALKKESTPKVPV
                     IPSTSSLPKPPCAATTLGDDIPDLSLNSADPDLPIFVSTNEHELFQEAENALEMLDDF
                     DFDRLLDATSDGSPLSESGGENGNTTQPTFASQVVPKVVPTLPDGLPVLLEKRIEDLR
                     VAAKLFDEEGRKKFFTQDMNNILLDIELQLQELGPVIRSGVYSHLEAFVPCNKETLVK
                     RLKKLHLNVQDDRLREPLQKLKLAVSNVMPEQLFKYQEDCQARSQAKCAKLQADEERE
                     KNGSDDDDDEKPGKRVIGPRKKFHWDDTIRTLLCNLVEIKLGCYELEPNKSQSAEDYL
                     KSFMETEVKPLWPKGWMQARMLFKESRSVHNHLTSAPAKKKVIPASKPKVKEVMVKTL
                     PVRSFPTMLKECSPKKDPKAPASVVASGGCPCTSSSTSIVASASSSSTPAQETICLDD
                     SLDEDLSLPSASLDLVSEALAVINNGNKGPSVSSRLNVPTTKPRPGLREEKLASIMSK
                     LPLATPKKLDSPQTAHSSSLIAGHTGPVPKKPQDLAHTGISSGLIAGSSIQNPKVSLE
                     PLPARLLQQGLQRSSQIHASSSQTHVSSSQAQAAASSHALGTSEAQDASSLTQVTKVH
                     QHSAVQQNYVSPLQATISKSQTNPVVKLSNNPQLSCSSQLLKTSEKPLMYRLPLSTPS
                     PGNGSQGSHPLVSRTAPSTTTSSNYLAKAMVSQISTQGFKSPFSMAASPKLAASPKPA
                     TSPKPLTSPKPSVSPKPSLSAKPSVSTKLISKSNPTPKPAVCPSSSSPNTLVAQSSHS
                     TSNNPAHKQPSGMNISRQSPTLNLLPSNRTSGLPTTKTLQAPSKLTNSSSAGTVGKNS
                     LSGIPVNVPASRGSNLNSSGANRTSLSGGTGSGTQGATKPLSTPHRPTSASGSSVVTA
                     SVQSTAGASLLANASPLTLMTSPLSVTNQTVTPFGMLGGLVPVTMPFQFPLELLGFGT
                     DTAGVTATSGSTSAALHHGLTQNLLKSLQPGTQHAATLPHSPLPTHLQQAFNDGGQSK
                     GDTKLPRKPQ"
     exon            671..763
                     /gene="Ubn2"
                     /gene_synonym="RGD1310722"
                     /inference="alignment:Splign:2.1.0"
     exon            764..865
                     /gene="Ubn2"
                     /gene_synonym="RGD1310722"
                     /inference="alignment:Splign:2.1.0"
     exon            866..1003
                     /gene="Ubn2"
                     /gene_synonym="RGD1310722"
                     /inference="alignment:Splign:2.1.0"
     exon            1004..1107
                     /gene="Ubn2"
                     /gene_synonym="RGD1310722"
                     /inference="alignment:Splign:2.1.0"
     exon            1108..1597
                     /gene="Ubn2"
                     /gene_synonym="RGD1310722"
                     /inference="alignment:Splign:2.1.0"
     exon            1598..1668
                     /gene="Ubn2"
                     /gene_synonym="RGD1310722"
                     /inference="alignment:Splign:2.1.0"
     exon            1669..1798
                     /gene="Ubn2"
                     /gene_synonym="RGD1310722"
                     /inference="alignment:Splign:2.1.0"
     exon            1799..1917
                     /gene="Ubn2"
                     /gene_synonym="RGD1310722"
                     /inference="alignment:Splign:2.1.0"
     exon            1918..2031
                     /gene="Ubn2"
                     /gene_synonym="RGD1310722"
                     /inference="alignment:Splign:2.1.0"
     exon            2032..2175
                     /gene="Ubn2"
                     /gene_synonym="RGD1310722"
                     /inference="alignment:Splign:2.1.0"
     exon            2176..2226
                     /gene="Ubn2"
                     /gene_synonym="RGD1310722"
                     /inference="alignment:Splign:2.1.0"
     exon            2227..2269
                     /gene="Ubn2"
                     /gene_synonym="RGD1310722"
                     /inference="alignment:Splign:2.1.0"
     exon            2270..2320
                     /gene="Ubn2"
                     /gene_synonym="RGD1310722"
                     /inference="alignment:Splign:2.1.0"
     exon            2321..3865
                     /gene="Ubn2"
                     /gene_synonym="RGD1310722"
                     /inference="alignment:Splign:2.1.0"
     exon            3866..4097
                     /gene="Ubn2"
                     /gene_synonym="RGD1310722"
                     /inference="alignment:Splign:2.1.0"
     exon            4098..4187
                     /gene="Ubn2"
                     /gene_synonym="RGD1310722"
                     /inference="alignment:Splign:2.1.0"
     exon            4188..5101
                     /gene="Ubn2"
                     /gene_synonym="RGD1310722"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttctatttat gtgggggatc caacatggcg gctgcggcga ccctggcgat ggtggtggag
       61 cccatcagaa cgtagtagcg gggacaggga cctggtccgc actcacggtg gcgtccgcgg
      121 ggacagctga gggtgctgga gggaagaaaa gtgacggaga gcagaaggaa aggcgggcag
      181 gcacgccgtg cggcgtcgag acgagagccg gctcgagcga acgccgaggg ccagaacagt
      241 ggggatggcg gagccgcgca gagtcgcgtt cattagcctg tcaccggtga ggcggcgcga
      301 ggccgacttc gcgggcgcag agcgcgagcc cccccgactg gagccgcagc cgtaccgcga
      361 gccggcccgg gcggagccgg ccccccgcgc tgacgctcag cccccggcgc gcgacaagcc
      421 gctcccccag cgcgaggtca gccgcgccga gccgcccatg gcgctgcagc gcgagccccc
      481 gcggcccgag ccgccgccgc cgccgctgcc cctgcagact ccccctccgc gggagtcggc
      541 ttcccgggcg gagccgcccc cgcgaccgcc gaaggagact gttcgcctgg agctggtgct
      601 caaggacccc acggacgaaa gctgcgtgga gttcagctac ccggagctgc tgctgtgcgg
      661 agaacaacgg aagaaacttg ttcatacaga agatccattt actgatgagc ataaggagag
      721 acaagaagtg gaaatgttgg ctaagaagtt tgaaatgaaa tacggtggga aagcccgtaa
      781 acaccggaag gatcggctgc aggatttaat tgatataggc tttggctacg atgagacaga
      841 cccgtttatt gataactcag aggcttatga cgaattagtc cctgcttctc taacaacaaa
      901 atatggaggc ttctatatca acactggcac tctgcagttt cgccaagctt cagatactga
      961 agaagatgat tttacagata accagaagca caagccaccc aaggttccca aaataaaaga
     1021 tgatgatatt gaggcaaaga agcggaagcg gaaagaggaa ggggaaaaag aaaagaagcc
     1081 aaggaaaaaa gtacccaaac aactgggagt tgtggctctc aattcacaca agtctgaaaa
     1141 aaagaaaaaa cgatataaag attccctttc tttggctgcc atgatacgaa aattccaaaa
     1201 agagaaggat gccttgaaga aggagtctac ccctaaagtc ccagtgatcc catcaacttc
     1261 ctctctgcct aagccccctt gtgctgccac aaccctgggg gatgatatcc cggacttaag
     1321 tctgaacagt gctgatcctg acctccctat ctttgttagc acaaatgagc atgaactatt
     1381 tcaggaagct gaaaatgccc tagagatgct ggatgatttt gactttgaca gattactgga
     1441 tgctacttct gatggaagtc ccctctctga gtcaggggga gaaaatggaa acaccaccca
     1501 gcccaccttc gcctctcagg ttgtgcccaa ggtggttcct acacttccag atggtctacc
     1561 tgtgcttctg gagaaacgca ttgaggacct tcgtgtagct gccaaacttt ttgatgaaga
     1621 aggaaggaaa aaattcttta cacaagatat gaataatatt cttctagaca tcgagttaca
     1681 gctacaagaa ctaggtcctg tcatccgtag tggtgtctac tcccatcttg aagcatttgt
     1741 gccatgcaat aaggaaacac tggtaaaacg tctaaagaag ttacatctta acgtccagga
     1801 tgatcgttta agagaacctc tgcagaaact gaagctggct gttagcaatg tcatgcctga
     1861 acagctgttt aaataccagg aggactgcca ggctcgcagt caagccaaat gtgccaagtt
     1921 gcaagcagat gaagaacgag aaaaaaatgg atccgatgat gatgatgatg agaaaccagg
     1981 gaagcgagtc ataggcccac gaaagaagtt ccactgggat gacaccatca gaactttgtt
     2041 atgtaacctt gttgaaatca aattgggatg ctatgaacta gagccaaata aaagccagtc
     2101 tgctgaggat tatcttaaat ccttcatgga gacagaagtg aagccactgt ggcctaaggg
     2161 ctggatgcag gcaagaatgc tttttaagga aagccggagt gtacataatc atcttacttc
     2221 tgctccggca aagaaaaagg tgattcctgc atcaaagccc aaagtcaagg aggtgatggt
     2281 aaagaccctt cctgttcgtt ctttccctac tatgctgaag gaatgtagcc ccaaaaaaga
     2341 ccccaaagcg cctgcatccg tggtggcttc aggtggttgt ccttgcacga gttccagcac
     2401 atcgatcgtt gcctcagcca gctctagctc tacaccagcc caagaaacca tctgcctgga
     2461 tgactcccta gatgaagacc tttctctccc ctcagcctct ctggatcttg tatctgaagc
     2521 tttagctgtc atcaacaatg ggaacaaggg cccctcagtc agttcaaggc taaatgtgcc
     2581 aaccacaaaa cctcgtccag gcctgagaga agaaaagcta gcaagtatca tgagtaagtt
     2641 accactggct actcccaaaa aactagattc tcctcagact gctcactcat caagtctcat
     2701 tgctggtcac acggggccag taccaaagaa accccaggac ttagctcaca ctggtatttc
     2761 ttcaggcctt attgctggtt cttcaattca gaaccctaaa gtttccttag aacctttgcc
     2821 agccaggctg ctccagcaag gactgcaaag gtcaagccag atacatgctt cctcttcaca
     2881 gactcatgtc tcctcctccc aagcccaagc tgctgcctcc tctcatgctc tgggaacatc
     2941 agaggctcaa gatgcttctt cgttaacaca agtaacaaag gtgcaccagc actcagctgt
     3001 ccagcagaac tacgtgtctc ctttacaagc taccattagt aaatcacaga ccaacccagt
     3061 ggtgaaatta agtaataacc cccaactttc ctgttcgtcc cagttactca agacttcaga
     3121 gaagccactg atgtatcgcc tccctttgtc taccccatca cctggaaatg gttctcaggg
     3181 gtctcacccc ctggtttcta ggacagcacc gagtaccact acctccagta actatttagc
     3241 caaggctatg gtgtcacaaa tctccacgca gggtttcaaa tctcccttct caatggccgc
     3301 atctcccaaa cttgccgcat ctcccaaacc tgccacatct cctaaacctt tgacctcacc
     3361 taagccttct gtttcaccca agccctctct atcagctaag ccttcagtat ctactaaact
     3421 gatttctaaa tccaacccaa ctcccaagcc tgctgtatgc ccgagttctt ctagtccaaa
     3481 cacactagta gcccagagta gccactccac aagtaacaac cctgcccata aacagcccag
     3541 tggaatgaac atcagcagac agtctcccac tctaaatttg ttgccctcaa atcgcacttc
     3601 tggccttccg actacaaaaa ctcttcaggc cccttctaaa ctaacaaact catcgtccgc
     3661 tggaactgtt gggaagaaca gcttgagtgg aatcccagtg aatgtacctg ccagcagagg
     3721 tagcaacctt aactcaagtg gagctaatag gactagtcta tctgggggaa caggaagtgg
     3781 aacacagggt gctactaaac cgttgtctac tccacataga ccaacctctg cctcagggtc
     3841 ttcagtggta acagccagtg tgcagtctac agcaggagca tcattattgg ctaatgcctc
     3901 acctctgact ctcatgacat cacctttgtc tgtaacaaat caaactgtga ctccctttgg
     3961 gatgctgggt ggccttgttc cagtgaccat gcccttccag tttcccttgg agcttcttgg
     4021 ctttggaacg gacacagctg gagtgacagc cacctcggga tctacctcag cggctctcca
     4081 tcatggccta actcagaatt tactaaagag tttacagcca ggaactcagc acgcagcaac
     4141 ccttccccac tcacctctgc ctacacactt acagcaagca tttaatgatg gaggccaaag
     4201 taaaggggac actaaattac cacggaaacc tcagtgactt tgcagcaagt gagagaggaa
     4261 ccacgtggct ggctagctgg gaggtggccg acctgatggg aagtcttggt ggtcacaggg
     4321 ctgctgttcc tgtcgatgtt tacattcttg tcccaagcac tgtggagaga aggaaaagaa
     4381 agagtatgtt acttgagcaa agccagtgca ggaggaagaa atgcttctgt gcaaagttag
     4441 tgacctttgg tcttttaaaa tcaaaattcc catgttaacc tacttaaaac agactcagct
     4501 gtcaaaccca cagaagtata aatttgactt tatagaaaaa gaaaaagaaa aaagaaggaa
     4561 gtgagttgag tggatttggg taaatggcca tccatcctgg gggtcggatc tgaacactct
     4621 acatataagt gcatagaaaa agcagctaaa agtagaatta gcccagtttg aggagaatca
     4681 gtcatgtctg tttagtggac agatttgcca cagtcgcatg atgctctcca gacagtagcc
     4741 gaagagtact gtaccctcaa atgtcctgag caaacttgaa tcttctccag tatgtagcag
     4801 ctccctgtgc aagtcagcgg actgaagatg cttcagcaga gttgctgtga cacagtgata
     4861 atagtactat agcttctaga tttttaaagt caggaaagtg agcctgtgct cttaagaaac
     4921 aaaatgtaga taatcccctt tttataaaag ggtcagtttc atcgtccatt gagaagtaag
     4981 tactgaactc ttcccgcagg taacttgtcg cctgctattg actggttagt atttatttct
     5041 agtcctgatg cacagaagtg actgcttgca ttttctcttg acatgggtct ttgttgttgg
     5101 g
//
