LOCUS       NM_183052               3260 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus ubiquitin conjugating enzyme E2 V2 (Ube2v2),
            mRNA.
ACCESSION   NM_183052
VERSION     NM_183052.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3260)
  AUTHORS   Zhao,G.Y., Sonoda,E., Barber,L.J., Oka,H., Murakawa,Y., Yamada,K.,
            Ikura,T., Wang,X., Kobayashi,M., Yamamoto,K., Boulton,S.J. and
            Takeda,S.
  TITLE     A critical role for the ubiquitin-conjugating enzyme Ubc13 in
            initiating homologous recombination
  JOURNAL   Mol Cell 25 (5), 663-675 (2007)
   PUBMED   17349954
REFERENCE   2  (bases 1 to 3260)
  AUTHORS   Andersen,P.L., Zhou,H., Pastushok,L., Moraes,T., McKenna,S.,
            Ziola,B., Ellison,M.J., Dixit,V.M. and Xiao,W.
  TITLE     Distinct regulation of Ubc13 functions by the two
            ubiquitin-conjugating enzyme variants Mms2 and Uev1A
  JOURNAL   J Cell Biol 170 (5), 745-755 (2005)
   PUBMED   16129784
REFERENCE   3  (bases 1 to 3260)
  AUTHORS   Hofsaess,U. and Kapfhammer,J.P.
  TITLE     Identification of numerous genes differentially expressed in rat
            brain during postnatal development by suppression subtractive
            hybridization and expression analysis of the novel rat gene rMMS2
  JOURNAL   Brain Res Mol Brain Res 113 (1-2), 13-27 (2003)
   PUBMED   12750002
REFERENCE   4  (bases 1 to 3260)
  AUTHORS   Franko,J., Ashley,C. and Xiao,W.
  TITLE     Molecular cloning and functional characterization of two murine
            cDNAs which encode Ubc variants involved in DNA repair and
            mutagenesis
  JOURNAL   Biochim Biophys Acta 1519 (1-2), 70-77 (2001)
   PUBMED   11406273
REFERENCE   5  (bases 1 to 3260)
  AUTHORS   Buck,L. and Axel,R.
  TITLE     A novel multigene family may encode odorant receptors: a molecular
            basis for odor recognition
  JOURNAL   Cell 65 (1), 175-187 (1991)
   PUBMED   1840504
REFERENCE   6  (bases 1 to 3260)
  AUTHORS   JACKSON,B.R. and DANIEL,W.H.
  TITLE     Recurrent carcinoma of the rectum, surgical treatment
  JOURNAL   Calif Med 91 (3), 149-150 (1959)
   PUBMED   14406273
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000011.1 and FM082155.1.
            
            On Jan 25, 2011 this sequence version replaced NM_183052.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BN000090.1, SRR26360190.740129.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-48                JAXUCZ010000011.1  98808681-98808728
            49-323              FM082155.1         39-313
            324-3260            JAXUCZ010000011.1  98839647-98842583
FEATURES             Location/Qualifiers
     source          1..3260
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q23"
     gene            1..3260
                     /gene="Ube2v2"
                     /gene_synonym="MMS2"
                     /note="ubiquitin conjugating enzyme E2 V2"
                     /db_xref="GeneID:287927"
                     /db_xref="RGD:727838"
     exon            1..48
                     /gene="Ube2v2"
                     /gene_synonym="MMS2"
                     /inference="alignment:Splign:2.1.0"
     CDS             33..470
                     /gene="Ube2v2"
                     /gene_synonym="MMS2"
                     /note="ubiquitin-conjugating enzyme E2v2;
                     ubiquitin-conjugating enzyme variant MMS2"
                     /codon_start=1
                     /product="ubiquitin-conjugating enzyme E2 variant 2"
                     /protein_id="NP_898875.1"
                     /db_xref="GeneID:287927"
                     /db_xref="RGD:727838"
                     /translation="MAVSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLT
                     RWTGMIIGPPRTNYENRIYSLKVECGSKYPEAPPSVRFVTKINMNGINNSSGMVDARS
                     IPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTYNN"
     exon            49..197
                     /gene="Ube2v2"
                     /gene_synonym="MMS2"
                     /inference="alignment:Splign:2.1.0"
     exon            198..323
                     /gene="Ube2v2"
                     /gene_synonym="MMS2"
                     /inference="alignment:Splign:2.1.0"
     exon            324..3260
                     /gene="Ube2v2"
                     /gene_synonym="MMS2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcgtgcggcg gtgcgtctgg tagaaggaga agatggcggt gtccacagga gttaaagttc
       61 ctcgtaattt tcgcttgttg gaagaacttg aagaaggaca aaaaggagta ggtgatggta
      121 cggttagctg gggccttgaa gatgatgaag acatgacact tacaaggtgg acaggcatga
      181 ttattgggcc accaaggaca aactatgaaa acagaatata cagcctgaaa gtagaatgcg
      241 gatctaaata cccagaagca cctccatccg ttagatttgt aacaaagatt aatatgaatg
      301 ggatcaataa ttccagtgga atggtggatg cacggagcat accagtatta gcaaaatggc
      361 aaaattccta tagcattaaa gttgtacttc aagagctaag acgtcttatg atgtccaaag
      421 aaaacatgaa gcttccacag ccaccagaag gacagacata caacaactaa ttttagtgga
      481 tctcaaactt gtcttaaatc aacaaccttc tactcatgtt aatgtcttga ttaaatatca
      541 ccatgcaaaa tacccacaca ttaagtaaaa gaattgcagc tggtaaacat gacctggaca
      601 gttgtaagaa tatatttaat atatgtacac ctattatgtt ttcaggtaac aagagaagtg
      661 cagcacaatt tttctttctc ttcttaaaag cactgtcatt taaacatgaa tctgaagcat
      721 tcaaaatgga attcaggttg tcaagacaga agcatggcaa aagagtgtca gatggccacg
      781 ggaacctttg tttttctgaa agtaaagtct caagaaagaa gaacagaact ggcaggcttt
      841 atccaccata tttagagctg cagatggaat tgtttaaagt agcagacata atgactagtc
      901 accaattgtg ttaatccttg aagcggtgtg ggtgctgact actgttagtg tcaaacatag
      961 gtgcaggatg gttttgatac ctgtatttat aataaaaaga tgtttggggt tttgaatttc
     1021 tgttaaaagc tgttctcgtt tgttacatgt aacagacatg ataagttgtt tacagtcttt
     1081 gtttaataaa acatgcttag aagttttaag tgaagacaac aaaaaggaaa taggtgttgg
     1141 atatgtgatt ttgagatgaa agttagtctt aaaatgtaaa taaaatatgg aatgtgtctt
     1201 caaagactgt gctatttctg ttacattgat atatgctata gtagccatat caaggtagca
     1261 aaattggggg ttattaagct aggcatggta atggcaaaag caggaagatt ttcagttcca
     1321 ggccagcttg ggctgataca taagattgta tgtaaaacca aagaaataat gagagaatat
     1381 caaagatttt cattgaaatt ctattttata tgcttatgtt tggaacttac agagcatctt
     1441 tttgacttct tacatgctca gtttaatttc tttgcacaaa gaggtatctc ggttactaca
     1501 tttcaagttt tatttcatca tgggtaattt taaaattgca ttttagcaat tttcatagtt
     1561 acagactgca aattattcaa gtactcattc atttttttct ttatgactta tttttctatg
     1621 aagcttttgg ttcattacag ttgactgaat tgaagacatt tcttcacctg tctttacatt
     1681 ttttttttac tttatttgtg tgtgtgtatg tgtgttgtgt gtgtgcgcac atgcacatat
     1741 gtgtgtgtac acttgtatga aggtcaaagg ttacctttgg agttggttct tgccttcact
     1801 tttatatgtg ttcctgatgt caaactctga tcaccatgta ccatctgtct gaataaggga
     1861 atgagtgcct tcactgaaga gtcatctcat tggtccctct tctaagacca atgaaagtta
     1921 attttatcat tccactccac attcacttta acaaatatgt gtctgaagtt gaaagttcat
     1981 ttttattctt ttatcatatt gacaaagttt gattgtcaaa ataaaaaatt agatgttcaa
     2041 gctttgccta taaagaaagt aaaggaaaag tattactagt agactggatt attttggtta
     2101 cttttatagc caagacaggt ttctttaaac atacttggca tgttttgatt aagctgttta
     2161 aaaattaacc tttttttagt tagcatttca ttaattaaac actagacatt ttgtctaaac
     2221 attatcatca cttttgtatt ttgaaacagt atcacctatg atagcctcaa acttgcagaa
     2281 ttacttctgt ctcaacctct caagtactgg ttctggtgta cactgcaatg tccagaatag
     2341 atggactcat tttaaatgaa ctagttaatt atcagcgagg tttctttatt ctttgtgtgt
     2401 gtgtgtgtgt gtgtaggtgg ggaggagtag tggtgtatac agaagcctta ggttgacgtc
     2461 tggagtctcc tttaattgct ctttcacttt atatagtgtg agacagggtt tctaaatgaa
     2521 gctcactgat gcggctagac ttgctaatca gcttgctacc aagatagatc ccctgcctct
     2581 gctttccaag gccggaatta cagcctcaac tgttatttta tgtgggttct agggatctga
     2641 tatccgacga gcattttcga ccattgagcc atctcagtcc ctcaaaaatg ttctaagtat
     2701 ttaaaaatca cacagaatgt acacattttc catgcgttaa ttattaaagt agacttaaac
     2761 attatactta atatttaatg gttaaagatt acattgaatt gcgatactat agaatcatta
     2821 tcagtctgtt ttctgccttg aaaatgtgtc ttgtgatact tggaaactag aaagtattgg
     2881 gatgcttttg ataggctctg atagaatctc gtactttggt ctcatgttgt ctttgtgtat
     2941 gctacccaag gctgttgtca gacagagtcc tacctattta aaaaaaaggg ggattgttga
     3001 ttttagcaga aatctacgag tcagttaaaa gatttccaaa gcaaaatcca ttttgcatgt
     3061 agcaattata tatgataatc taagatatat taattcatga aattttagag tcttataatt
     3121 ataagacaga agtttaaaag gaaattttcc tttgtaaagt ggctagggtt gcaggaatgt
     3181 tgtggtatag actagaaagt tgccttagaa atttgtttca agagattttt aaggatgacc
     3241 cttgatgcct gtatgttaat
//
