LOCUS       NM_001106448            1832 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus ubiquitin conjugating enzyme E2 Q1 (Ube2q1),
            mRNA.
ACCESSION   NM_001106448 XM_001074719 XM_215612
VERSION     NM_001106448.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1832)
  AUTHORS   Wan,C., Chen,J., Hu,B., Zou,H., Li,A., Guo,A. and Jiang,J.
  TITLE     Downregulation of UBE2Q1 is associated with neuronal apoptosis in
            rat brain cortex following traumatic brain injury
  JOURNAL   J Neurosci Res 92 (1), 1-12 (2014)
   PUBMED   24166684
  REMARK    GeneRIF: UBE2Q1 might play an important role in the
            neuropathological process of traumatic brain injury through
            modulating p53 signaling.
REFERENCE   2  (bases 1 to 1832)
  AUTHORS   Grzmil,P., Altmann,M.E., Adham,I.M., Engel,U., Jarry,H.,
            Schweyer,S., Wolf,S., Manz,J. and Engel,W.
  TITLE     Embryo implantation failure and other reproductive defects in
            Ube2q1-deficient female mice
  JOURNAL   Reproduction 145 (1), 45-56 (2013)
   PUBMED   23108111
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1832)
  AUTHORS   Wassler,M.J., Shur,B.D., Zhou,W. and Geng,Y.J.
  TITLE     Characterization of a novel ubiquitin-conjugating enzyme that
            regulates beta1,4-galactosyltransferase-1 in embryonic stem cells
  JOURNAL   Stem Cells 26 (8), 2006-2018 (2008)
   PUBMED   18511602
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC166534.1.
            
            On May 7, 2008 this sequence version replaced NM_001106448.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC166534.1, SRR8487227.120091.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1832
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..1832
                     /gene="Ube2q1"
                     /gene_synonym="Ube2q"
                     /note="ubiquitin conjugating enzyme E2 Q1"
                     /db_xref="GeneID:295252"
                     /db_xref="RGD:1305305"
     exon            1..416
                     /gene="Ube2q1"
                     /gene_synonym="Ube2q"
                     /inference="alignment:Splign:2.1.0"
     CDS             90..1358
                     /gene="Ube2q1"
                     /gene_synonym="Ube2q"
                     /EC_number="6.3.2.19"
                     /note="ubiquitin-conjugating enzyme E2Q (putative) 1;
                     ubiquitin-conjugating enzyme E2Q family member 1"
                     /codon_start=1
                     /product="ubiquitin-conjugating enzyme E2 Q1"
                     /protein_id="NP_001099918.1"
                     /db_xref="GeneID:295252"
                     /db_xref="RGD:1305305"
                     /translation="MQQPQPQGQQQPGPGQQLGVQGAAPGAGGGPGGGPGPGPCLRRE
                     LKLLESIFHRGHERFRIASACLDELSCEFLLAGAGGAGAGAAPGPHLPSRGSVPGDPV
                     RIHCNITESYPAVPPIWSVESDDPNLAAVLERLVDIKKGNTLLLQHLKRIISDLCKLY
                     NLPQHPDVEMLDQPLPAEQCTQEEVSSEDEDEEMPEDTEDLDHYEMKEEEPAEGKKSE
                     DDGIGKENLAILEKIKKNQRQDYLNGAVSGSVQATDRLMKELRDIYRSQSFKGGNYAV
                     ELVNDSLYDWNVKLLKVDQDSALHNDLQILKEKEGADFILLNFSFKDNFPFDPPFVRV
                     VSPVLSGGYVLGGGAICMELLTKQGWSSAYSIESVIMQISATLVKGKARVQFGANKSQ
                     YSLTRAQQSYKSLVQIHEKNGWYTPPKEDG"
     exon            417..521
                     /gene="Ube2q1"
                     /gene_synonym="Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            522..626
                     /gene="Ube2q1"
                     /gene_synonym="Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            627..677
                     /gene="Ube2q1"
                     /gene_synonym="Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            678..818
                     /gene="Ube2q1"
                     /gene_synonym="Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            819..903
                     /gene="Ube2q1"
                     /gene_synonym="Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            904..964
                     /gene="Ube2q1"
                     /gene_synonym="Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            965..1055
                     /gene="Ube2q1"
                     /gene_synonym="Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            1056..1114
                     /gene="Ube2q1"
                     /gene_synonym="Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            1115..1163
                     /gene="Ube2q1"
                     /gene_synonym="Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            1164..1259
                     /gene="Ube2q1"
                     /gene_synonym="Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            1260..1326
                     /gene="Ube2q1"
                     /gene_synonym="Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            1327..1808
                     /gene="Ube2q1"
                     /gene_synonym="Ube2q"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caggaagtgc ggaccgcggc ggcggcggag cccggagcgg aggccggagg ctcccggccc
       61 gccggccccg gagcggagcg gagcggagga tgcagcagcc gcagccgcag gggcagcagc
      121 agccggggcc ggggcagcaa ctgggggtcc agggggcggc gccgggggcc gggggcggcc
      181 cgggaggggg cccggggcca gggccctgcc tgaggcggga gctgaagctg ctcgagtcca
      241 tcttccaccg cggccacgag cgcttccgca ttgccagcgc ctgcctggac gagctgagct
      301 gcgagttcct gctggccgga gccggagggg ccggggccgg ggctgcgccc ggaccccatc
      361 tcccctcccg ggggtcggtg ccgggggacc ccgtccgcat ccactgcaac atcacggaat
      421 cataccctgc tgtgcccccc atctggtcgg tggagtctga tgatcctaac ttggctgctg
      481 tcttggagag gctggtggac ataaagaaag ggaatacttt gctcttgcag catctgaaga
      541 ggatcatctc tgacctgtgt aaactctaca acctccctca gcatcctgat gtggaaatgc
      601 tggatcagcc cttgccagca gagcagtgca cgcaggaaga agtatcttca gaagacgaag
      661 acgaagagat gcccgaggat acagaagacc tagatcacta tgagatgaaa gaggaggagc
      721 cagcggaggg caagaagtct gaagatgatg gcatcggaaa agaaaacctg gccatcctag
      781 agaaaattaa aaagaaccag aggcaagatt acttaaatgg tgcagtgtct ggctcggtgc
      841 aggccactga ccggctgatg aaggagctca gggatatata ccgatcacag agtttcaaag
      901 gcggaaacta tgcagtcgaa ctcgtgaatg acagtctgta tgactggaat gtcaaactcc
      961 tcaaagttga ccaggacagc gctttgcaca atgatcttca gatcctaaag gagaaggaag
     1021 gagcagactt catcctactc aacttctcct ttaaagataa cttccccttt gacccaccgt
     1081 tcgtcagggt tgtgtctcca gtcctctctg gagggtatgt tctgggcgga ggtgccatct
     1141 gcatggagct gctcaccaag cagggctgga gcagcgccta ctccatagag tccgtgatca
     1201 tgcagatcag cgccacgctg gtgaagggga aggcacgggt gcagttcgga gccaacaaat
     1261 ctcagtatag tctgacaaga gcacagcagt cctacaagtc cttggtgcag atccacgaaa
     1321 aaaacggctg gtacacaccc ccgaaggaag atggctaacc ctggagtatc atccccttcc
     1381 tcctccccag gcaccactgg accaattacc tttgaatgct gtatttggat ctcacgctgc
     1441 ctctggttcc cctcattttt cctggacgtg atagctctgc ctattgcagg acaatgatgg
     1501 ctattctaaa cgctaaggaa aaccaaccac ccacaacact gaactgtctc aagtactcaa
     1561 gactgactac agaccaacca cctcgctgga acccttgcta gcaggcattc ttataaagaa
     1621 actctcaagc ctccttatat tgctggaaac tcagctgtgc tccagactag agcctcctta
     1681 cctatgctat gggttttaat ttattttctc ttatttcatg tacactgctc tttttggtta
     1741 cagtgtatga tggatgtgta tgaaaaaaat gtatctttgg gaaaacaatt acagtttgtt
     1801 aatttgaaaa aaaaaaaaaa aaaaaaaaaa aa
//
