LOCUS       XM_039078104            1915 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus UDP-N-acteylglucosamine
            pyrophosphorylase 1-like 2 (Uap1l2), mRNA.
ACCESSION   XM_039078104
VERSION     XM_039078104.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039078104.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1915
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1915
                     /gene="Uap1l2"
                     /note="UDP-N-acteylglucosamine pyrophosphorylase 1-like 2;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 13 Proteins, and 92% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:304954"
                     /db_xref="RGD:1309234"
     CDS             1..1800
                     /gene="Uap1l2"
                     /codon_start=1
                     /product="UDP-N-acetylhexosamine pyrophosphorylase"
                     /protein_id="XP_038934032.1"
                     /db_xref="GeneID:304954"
                     /db_xref="RGD:1309234"
                     /translation="MVMENLGKTSEITSHSPRRKGRGGRGPRSPRLLLAARPTAPAPR
                     MTPRRRSRSLVQPRECRGSSPSSVFTKPHYQSTRNVNDLRQRLSAAGQQHLLQFWNEL
                     SEAQQGELYMELQAMNFEEPNSFFQKAVGEFDRSSHQEKVDARMEPVPRQVLGSATRD
                     QDQLQAWESQGLSQISQNKVAVLLLAGGQGSSLGVTYPKGMYDVGLPSHKTLFQIQAE
                     RILKLQQLAEKQYGNKCIIPWYIMASGRTMESMKEFFTKHKFFGLKKENVVFFQQGML
                     PAMSFDGKVILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILV
                     KVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEISLATAQKR
                     SSDGGLQFNAGNIANHFFTVPFLKDVVSVYEPQLQHHVAQKKIPYVDSQGHLIKPDKP
                     NGIKMEKLVFDIFQFAKKFVVYEVLREDEFSPLKNADSQNGKDNPTTARHALMSLHHC
                     WVLNAGGHFIDENGSRLPAIPRSATNGKSETITADVNHKLKDANDVPIQCEISPLISY
                     AGEGLEGYVADKDFHAPLIIDENGVHELVKNGI"
ORIGIN      
        1 atggtaatgg aaaatctagg aaagacgtca gaaattacaa gtcactcacc gcggcgaaag
       61 gggcggggtg gccggggccc gcgctcccct cggttgctgc tcgcggcccg ccccaccgcc
      121 ccggcccctc ggatgacgcc gaggcgaaga agccggagcc tagtccagcc gcgggagtgt
      181 cgagggagtt ccccctcctc tgtttttaca aagcctcact accagagcac caggaatgtt
      241 aatgacctca gacagaggtt gtccgcggct gggcagcagc acctgctgca gttctggaat
      301 gagctgtcag aagcccagca gggagaactt tatatggaac tccaagccat gaactttgaa
      361 gagccgaact catttttcca gaaggccgtt ggcgaatttg atcgatcttc tcaccaagaa
      421 aaggtggatg cacggatgga gcctgtgccc agacaggttt tgggcagtgc taccagagat
      481 caagaccagc tgcaggcctg ggagagccaa ggactttccc agatttctca gaacaaagta
      541 gcagttcttc ttctagctgg tgggcagggg tcaagtcttg gagtcacgta tcccaagggc
      601 atgtatgatg tgggcttgcc atcccacaag acacttttcc agatacaagc agaacgtatt
      661 ctgaagctgc agcagttagc tgagaaacag tatggcaaca agtgtatcat cccctggtat
      721 ataatggcca gtggcagaac gatggaatcg atgaaggagt tctttacaaa gcacaagttc
      781 tttggtttaa aaaaggagaa cgtggtcttt ttccagcagg gaatgctgcc tgctatgagc
      841 tttgatggga aagttatctt ggaagagaaa aacaaagtct ctatggctcc agatgggaat
      901 ggtggtctct accgggctct tgcagcccaa aacattgtgg aggacatgga gcaaagaggc
      961 atctggagta ttcatgtcta ttgtgtggat aacatactgg tgaaagtggc agaccctcgg
     1021 ttcattggat tctgcattca gaaaggagca gactgtgggg caaaggtggt agagaaaacc
     1081 aaccccacgg agccagtcgg cgtggtttgc cgggtggatg gggtgtacca ggtagtggag
     1141 tacagtgaga tctctctggc cacagctcag aagcggagct cagacggagg gctgcagttc
     1201 aatgcgggga acatcgccaa tcacttcttc actgtgccgt tcctgaaaga tgttgtcagt
     1261 gtttacgaac ctcaattgca gcaccatgtg gctcagaaga agattccata tgtggattcc
     1321 cagggccact taattaagcc agacaagcca aatggaataa agatggaaaa attagtcttt
     1381 gacatcttcc agtttgcaaa gaagtttgtg gtgtacgaag tattacggga agacgaattc
     1441 tccccgctca aaaatgcaga cagtcagaat gggaaggaca acccgaccac tgcaaggcat
     1501 gccttgatgt cccttcacca ttgctgggtc ctcaatgctg ggggacactt catagatgaa
     1561 aatggctccc gcctcccagc catcccccgc agtgctacaa atggaaagtc agagaccatc
     1621 acagctgatg tcaatcacaa attgaaggat gccaatgatg tgccgatcca gtgtgagatc
     1681 tctcccctca tctcttacgc tggagaaggg cttgaaggct atgtggcaga taaagacttc
     1741 catgcaccct taatcatcga tgagaacgga gttcatgagc tggtgaaaaa tggcatatga
     1801 ttccttaagg gccactagga agccatggtt ttgatagatc aactgtgcac ctgcaggacc
     1861 tctcctggac cgctgacgtt tggacattca tggagtttca tttgcttgct ggtat
//
