LOCUS       NM_134379               2799 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus integral membrane transport protein UST4r
            (UST4r), mRNA.
ACCESSION   NM_134379
VERSION     NM_134379.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2799)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2799)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Dec 2, 2020 this sequence version replaced NM_134379.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ218143.1, FQ210050.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760400, SAMEA5760476
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-582               JAXUCZ010000001.1  214571251-214571832 c
            583-686             JAXUCZ010000001.1  214570093-214570196 c
            687-841             JAXUCZ010000001.1  214560687-214560841 c
            842-1010            JAXUCZ010000001.1  214560428-214560596 c
            1011-1134           JAXUCZ010000001.1  214550784-214550907 c
            1135-1250           JAXUCZ010000001.1  214526987-214527102 c
            1251-1465           JAXUCZ010000001.1  214525891-214526105 c
            1466-1574           JAXUCZ010000001.1  214522532-214522640 c
            1575-1778           JAXUCZ010000001.1  214503353-214503556 c
            1779-2799           JAXUCZ010000001.1  214501347-214502367 c
FEATURES             Location/Qualifiers
     source          1..2799
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..2799
                     /gene="UST4r"
                     /note="integral membrane transport protein UST4r"
                     /db_xref="GeneID:171397"
                     /db_xref="RGD:620976"
     exon            1..582
                     /gene="UST4r"
                     /inference="alignment:Splign:2.1.0"
     exon            583..686
                     /gene="UST4r"
                     /inference="alignment:Splign:2.1.0"
     exon            687..841
                     /gene="UST4r"
                     /inference="alignment:Splign:2.1.0"
     exon            842..1010
                     /gene="UST4r"
                     /inference="alignment:Splign:2.1.0"
     exon            1011..1134
                     /gene="UST4r"
                     /inference="alignment:Splign:2.1.0"
     exon            1135..1250
                     /gene="UST4r"
                     /inference="alignment:Splign:2.1.0"
     exon            1251..1465
                     /gene="UST4r"
                     /inference="alignment:Splign:2.1.0"
     exon            1466..1574
                     /gene="UST4r"
                     /inference="alignment:Splign:2.1.0"
     exon            1575..1778
                     /gene="UST4r"
                     /inference="alignment:Splign:2.1.0"
     exon            1779..2799
                     /gene="UST4r"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaaacaagaa aatccatgcc caaaccttag ttcctggaag gtaatggttc tctgactgca
       61 atggagaagt aattgagggg taaacatgtc tttgtgaaat atatgttctt tttaaatact
      121 ttgtactaat ttacgtggaa ttattatttg tttctcattg gagatattta ttcagcctca
      181 atggcctttc aggaactcct gaatcaggta ggaggcctag ggagattcca gatccttcag
      241 atggtttttg ttgtcttcac cagtgttatt gtggtacctc atattataat agagaacttt
      301 actgcagcca ttcccagtca tcgctgctgg gttcctatcc tcgacaatgt cactgtctct
      361 gataacgaca gtagaattct gaaccaagat aaactcctga agatctccat ccccttggac
      421 tcccacctga gactagataa gtgtcgtcgt tttgcccaac cacagtggca tcttcttgat
      481 ttgaatgata ctttctccag tataactgag ccagacactg agccctgtgt ggatggctgg
      541 gtatatgaca ggagcaactt tcattctacc actgtgactg agtggaacct ggtgtgtgaa
      601 tctcaggcac tgaattctgt cactaaactt tcatttatga ttggtgcatt tataggaggt
      661 attgtaaatg gccttctgtc agacaggttt gggaggaagt tcattttaaa atatgcttta
      721 ttacaaatgg ccatcactga aacctgtgca ggttttgctc ccaacttatt catttattgc
      781 tctctaagat tcctggcagg aatgtctttg gaacccataa cagtaaatat taacttgctc
      841 atgtttgaat ggacaagccc taaattccta accatggtga cagttcttgg atcttgtgct
      901 ggtagctttg gaggcatgat attggcaggc ctggcttttc aatttcaaaa ctggcaccac
      961 ctccagctgg caatgtctgt accaattttc ttcttcctta tactcacaag gtggctgtca
     1021 gagtcagctc ggtggctgat tgtgatcaac aagccccaga agggcttaaa ggaactaaaa
     1081 aaagttgcac acattaatgg aatgaagaaa tctggagaca acataaccat ggaggttgta
     1141 agaacaagta tgaagaagga acttgaggca gcgaagatga gaccttctcc aagagacttg
     1201 ttccacacac ccatcctacg taagcagata tatatcctgt cctttataag acttttattt
     1261 atactgtcag gtgtgggcgt ggcaattcac ctccaacacc tgagtaataa tattgaactg
     1321 ttgcagattc tcattagtgt atcatccata ctattcagtg ttattggaca ttttgtactt
     1381 aatcacatcg gccgtagaat aacccagatg gttatcatgt tcctgagggg aatctctatt
     1441 ctgactgcta tatttgcacc tcaagaaatg gagaccctgc gttttatcat ggccatgatg
     1501 gcagaaggac ttgctgctct aagttatgct gctaattctc tacatgcaaa tgaactactt
     1561 ccaaccacgt taagggcaac agctagagga gtcattggaa tgtttggcaa tattggattt
     1621 ttcctggcac ccctgtgtat gatgctagcg tcatattctc ccaacttgcc ctggatcttc
     1681 tatggaggct tcgccatcct cagtgggttt attgtgcttc tccttcctga aaccaagaat
     1741 aaccctctgc ctgattgcac ccatgatgta gaaaatgatt ggaaagagtc aagacaagaa
     1801 atgaaggagg atcccatcat taaagtcaca cggttttaaa gaacacctgg aatcatctga
     1861 ccaaaggaca agagaaaaaa tgatattcat gacatggtgg taatttttcc aggatgatta
     1921 ctcagaatta ttcattgaca gtatcaaatt ttttttatga tgcaaatcag taagatttta
     1981 ttcagtgaca actatgatgt ttttacttga tcattaaaaa gactccccac catgttaaag
     2041 cggacagtac aggacagaag cctcgaataa ctgtcctctg agaggctcca cccagcagcc
     2101 aatggaaaga gatacagaga ctctcaccca aacacagatg gagcttggga agtttcacag
     2161 aggaattggg ggaaggattg agggatctga agaggaaagg gactttacag gacaaccaac
     2221 agagtcaact aacctggacc ctttggggct cccagagatt gaatcaccaa ccaaagagca
     2281 aacacaggct tgacctaggc tcctgcacat gtgtagcaga tgagcatctt gatctttatg
     2341 caggtcctgc aacagaagac ggtgctgtct ctaactctgt tgcctgcctg cctgcctgcc
     2401 tgcctgcctg cctgcctgcc tgcctgcctg cctgcctgcc tgcctgcctg cctgcctgcc
     2461 cgcctgccta tggatcctgt tctcctaact gggctgcctt gtctggcctc agtgggagag
     2521 gatgcactag tcctgcagtg acttgatgta caggaggcag ggtgggggtg ggggtgggca
     2581 atacccagag aggaactccc ccttctcaaa ggagggaggg atggggagag gatctgcatg
     2641 aggaagtact gggaggagag agacgggggc tgatgttggg atgaaaagtg aataaatgaa
     2701 taaacttaag aaataaaaaa aaaagactcc ccaccctctt ttctacatct cccaagagat
     2761 tgtctgaact ttttttaata aaagacttct atcctttaa
//
