LOCUS       NP_001163944             315 aa            linear   ROD 26-FEB-2024
DEFINITION  tRNA wybutosine-synthesizing protein 5 [Rattus norvegicus].
ACCESSION   NP_001163944 XP_001067847 XP_217397
VERSION     NP_001163944.1
DBSOURCE    REFSEQ: accession NM_001170473.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 315)
  AUTHORS   Kato M, Araiso Y, Noma A, Nagao A, Suzuki T, Ishitani R and Nureki
            O.
  TITLE     Crystal structure of a novel JmjC-domain-containing protein, TYW5,
            involved in tRNA modification
  JOURNAL   Nucleic Acids Res 39 (4), 1576-1585 (2011)
   PUBMED   20972222
REFERENCE   2  (residues 1 to 315)
  AUTHORS   Noma A, Ishitani R, Kato M, Nagao A, Nureki O and Suzuki T.
  TITLE     Expanding role of the jumonji C domain as an RNA hydroxylase
  JOURNAL   J Biol Chem 285 (45), 34503-34507 (2010)
   PUBMED   20739293
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC158619.1, FM112098.1 and CK845177.1.
            
            On or before Dec 20, 2009 this sequence version replaced
            XP_217397.4, XP_001067847.1.
            
            Transcript Variant: This variant (1) represents the protein-coding
            transcript.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Rattus norvegicus"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q31"
     Protein         1..315
                     /product="tRNA wybutosine-synthesizing protein 5"
                     /EC_number="1.14.11.42"
                     /calculated_mol_wt=36447
     Region          15..255
                     /region_name="Cupin_8"
                     /note="Cupin-like domain; pfam13621"
                     /db_xref="CDD:463936"
     CDS             1..315
                     /gene="Tyw5"
                     /gene_synonym="C2orf60; RGD1311269"
                     /coded_by="NM_001170473.1:275..1222"
                     /db_xref="GeneID:301419"
                     /db_xref="RGD:1311269"
ORIGIN      
        1 maeqrlpvpr lrgvsreqfm ehlypqrkpl vlegldlgsc tskwtvdyls qvggtkevki
       61 hvaavaqmdf isknfvyrtl pfnklvqraa eethkeffis qderyylrsl gedprkdiad
      121 irqqfpslge ditfpmffre eqffssvfri sspglqlwth ydvmdnfliq vtgkkritlf
      181 sprdaqylyl sgsksevlni dspdldkypl fpkarryecs leagdvlfip alwfhnvvse
      241 efgvgvnvfl khlpsecydt tdtygnkdpv aasramqild ralktlaelp eeyrdfyarq
      301 mvlriqdkay sknse
//
