LOCUS       NM_001024998            1548 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus thioredoxin domain containing 15 (Txndc15), mRNA.
ACCESSION   NM_001024998 XM_225635
VERSION     NM_001024998.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1548)
  AUTHORS   Breslow,D.K., Hoogendoorn,S., Kopp,A.R., Morgens,D.W., Vu,B.K.,
            Kennedy,M.C., Han,K., Li,A., Hess,G.T., Bassik,M.C., Chen,J.K. and
            Nachury,M.V.
  TITLE     A CRISPR-based screen for Hedgehog signaling provides insights into
            ciliary function and ciliopathies
  JOURNAL   Nat Genet 50 (3), 460-471 (2018)
   PUBMED   29459677
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC091340.1.
            
            On Jun 25, 2005 this sequence version replaced XM_225635.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC091340.1, SRR8487227.275788.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p14"
     gene            1..1548
                     /gene="Txndc15"
                     /gene_synonym="RGD1304696"
                     /note="thioredoxin domain containing 15"
                     /db_xref="GeneID:307180"
                     /db_xref="RGD:1304696"
     exon            1..136
                     /gene="Txndc15"
                     /gene_synonym="RGD1304696"
                     /inference="alignment:Splign:2.1.0"
     CDS             70..1101
                     /gene="Txndc15"
                     /gene_synonym="RGD1304696"
                     /note="thioredoxin domain-containing protein 15"
                     /codon_start=1
                     /product="thioredoxin domain-containing protein 15
                     precursor"
                     /protein_id="NP_001020169.1"
                     /db_xref="GeneID:307180"
                     /db_xref="RGD:1304696"
                     /translation="MQLLCWWQILLWVLGLPARGLEEDSGHTWQEERPVPALQVGSVY
                     LNEEEAAQGHRVQARVAEPSEASLGPRGDPMVVLSVIPGAAEDQRSTEAHDGTCSAQG
                     DEDPRCGGRENLFGLQGAGGFQDREEEYYAEPGVAEAEPVATEDANSTDSLKSPKVNC
                     EERNVTGLENFTLKILNMSQDLMDFLNPNGSDCTLVLFYTPWCRFSASLAPHFNSLPR
                     AFPTLGFLALDASQHSSLSTRFGTVAVPNILLFQGAKPMARFNHTDRTLETLKIFIFN
                     QTGIEAKKNVVVTQADQLGPLPSTLVKTVDWLLVFSLFFLISFIMYATIRTESIRWLI
                     PGQEQEHAE"
     exon            137..609
                     /gene="Txndc15"
                     /gene_synonym="RGD1304696"
                     /inference="alignment:Splign:2.1.0"
     exon            610..773
                     /gene="Txndc15"
                     /gene_synonym="RGD1304696"
                     /inference="alignment:Splign:2.1.0"
     exon            774..904
                     /gene="Txndc15"
                     /gene_synonym="RGD1304696"
                     /inference="alignment:Splign:2.1.0"
     exon            905..1521
                     /gene="Txndc15"
                     /gene_synonym="RGD1304696"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gactccggtt gctgtgcgcc ggttgtcttc caccgcggtg gctgtcgccg cggctccctg
       61 tcgcgcgcca tgcaactcct atgctggtgg caaatactgc tgtgggtgct gggccttccg
      121 gcccgcggcc tggaggagga cagtggtcac acgtggcagg aggagcggcc agtcccagct
      181 ctccaggttg gatctgtgta cctgaatgaa gaggaggctg cacagggcca tcgggtccag
      241 gcaagagtgg cggagccctc tgaggcctct ctgggtcccc gcggagatcc catggtggtg
      301 ctgtcggtga ttcccggggc agctgaggac caacggagca ccgaggccca cgatggcacc
      361 tgcagtgcgc agggagacga agacccgcgc tgcggtggcc gagagaacct cttcgggctt
      421 cagggtgcag gcggcttcca ggatcgggaa gaggagtact atgccgagcc tggagtggca
      481 gaggccgagc ccgtagccac tgaggatgcc aacagcaccg acagcctcaa gtcccccaag
      541 gtgaactgtg aggagaggaa tgtgaccggg ctagaaaact tcactctgaa gattttaaat
      601 atgtcccagg acctcatgga tttcctaaac ccaaatggta gtgactgtac gctggtcctc
      661 ttctataccc catggtgccg attctctgcc agcctggctc ctcattttaa ctccctgcct
      721 cgcgcatttc caacactcgg ctttttggct ctggatgcat ctcagcacag cagcctttct
      781 accagatttg gcactgtagc tgtccctaac attttgttat ttcaaggagc caaaccaatg
      841 gcgaggttta accatacaga tcgaaccttg gaaacactga aaatcttcat tttcaatcag
      901 acaggtatag aagccaagaa aaatgtggtg gtaacgcagg ctgaccaact gggcccgctc
      961 cccagcacgt tggtaaagac tgtggattgg ctgcttgtgt tttccttgtt ctttttaatt
     1021 agtttcatta tgtacgctac catccgcact gagagtatcc ggtggctgat tccaggacaa
     1081 gagcaggaac acgcagagta gagacagaac tgaacccgaa cacgtggggt cttagccctg
     1141 cggacttagc attacagcgg ctaacgtgtg gacttgccac ggaagtcagg ttcaagaatc
     1201 atgttcttgt tgaactactg aaaggctgaa aagatttcat ttaaatgtgt ttttactgtg
     1261 acaattagca gatgcaaaag tgtccactag aattgactgt tcttgttttt aatacttgaa
     1321 cataatgaat gaatttctct tctagtgttg ttaagcagga aagttgctgt atgacaggtg
     1381 gaacttcccg ggaagcatgg gctaggacag gaagtgtggg ctacgatggg gagcatgggc
     1441 taggacagga agtgtgggac gggatggcaa agtgtgcgtc taccacagga ccaggtgaaa
     1501 aataaagtca ctgaaagaat taaaaaaaaa aaaaaaaaaa aaaaaaaa
//
