LOCUS       NM_001127532            3088 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus thioredoxin domain containing 11 (Txndc11), mRNA.
ACCESSION   NM_001127532 XM_220122 XR_009202
VERSION     NM_001127532.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3088)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC166713.1.
            
            On or before May 23, 2008 this sequence version replaced
            XR_009202.1, XM_220122.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC166713.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132265, SAMD00132267
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3088
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q11"
     gene            1..3088
                     /gene="Txndc11"
                     /gene_synonym="RGD1307538"
                     /note="thioredoxin domain containing 11"
                     /db_xref="GeneID:302899"
                     /db_xref="RGD:1307538"
     exon            1..366
                     /gene="Txndc11"
                     /gene_synonym="RGD1307538"
                     /inference="alignment:Splign:2.1.0"
     CDS             125..2968
                     /gene="Txndc11"
                     /gene_synonym="RGD1307538"
                     /codon_start=1
                     /product="thioredoxin domain-containing protein 11"
                     /protein_id="NP_001121004.1"
                     /db_xref="GeneID:302899"
                     /db_xref="RGD:1307538"
                     /translation="MSECGGRGGGGGNNSEDAEDEGGGPKGSGSLSPAGAAASSEGRI
                     RRGLRGASLMARQRPELLCGAVALGCALLFALKFTCSRAKDVIIPAKPPVSFFSSRSP
                     VLDLFQGQLDYADHVRQDSEVVVLFFYAPWCGQSIAARAEIEQAASRLSDQVLFVAVN
                     CWWNQGKCRKQKHFFYFPVIHLYHRSFGPIEYKGPMSAVYIEKFVRRVMKPLLYIPSQ
                     SELLDFLSNYEPGVLGYFEFSGSPQPPGYLTFFTSALHSLKKDYLGTVRFGVITNKHL
                     AKLVSLVHSGSVYLHRHFNTSLVFPREVMNFTAENIYKWASENQETLFRWLQPHGGKS
                     LLLNNELKKGPALFLFIPFDPLAERHPLLDEITEVALEYSNCRGDQVVERLLQHLRRA
                     EAPVFQSLAPELQAPLPDAQLMAASPCCNTVVLPQGPALSRTHNVCELCVNQSVGTRP
                     SSVSVPQCSFFEMAAALDSFYLKEQTFYRVVSGSIECSNFLTSYSPFSFYTACCRTIS
                     RGTASFSGSAQDVFTAPAIEFSALEKSCEATAPSSIPHIEENRYRFPEVGLSSTAFTG
                     LSCRTNKTLNIYLLDSNLFWLYAERLGAPSSAPVKEFATIVDVKEESHYILDPKQALV
                     KLTLESFIQNFSVLYSPLKRHLTGSDSAQFPTQHLITEVTTDTFWEVTLRKQDVLLLY
                     YTQWCGFCPSLNHIFIQLARLLPEDTFTVARIDVSQNDLPWEFMVDRLPTVLFFPCNR
                     KDLSVKYPGDLPITLPNLLRFILHHSDPASAPQGLTTSPPTQECAQSAAVLQREHISH
                     VENAMQELRSEMSSLRRTQEQVEGRLFSARRDGHRLLRRQRTLEQQHRLLRRHSQKLQ
                     ALYLKKARELQELASASETPLPEHTWLKVLVATMERELERQGDAKEPTPLGKAHPNHS
                     KPMGATQLPGDTPPPSSASSTLASERKHENRTD"
     exon            367..583
                     /gene="Txndc11"
                     /gene_synonym="RGD1307538"
                     /inference="alignment:Splign:2.1.0"
     exon            584..681
                     /gene="Txndc11"
                     /gene_synonym="RGD1307538"
                     /inference="alignment:Splign:2.1.0"
     exon            682..811
                     /gene="Txndc11"
                     /gene_synonym="RGD1307538"
                     /inference="alignment:Splign:2.1.0"
     exon            812..905
                     /gene="Txndc11"
                     /gene_synonym="RGD1307538"
                     /inference="alignment:Splign:2.1.0"
     exon            906..1018
                     /gene="Txndc11"
                     /gene_synonym="RGD1307538"
                     /inference="alignment:Splign:2.1.0"
     exon            1019..1219
                     /gene="Txndc11"
                     /gene_synonym="RGD1307538"
                     /inference="alignment:Splign:2.1.0"
     exon            1220..2009
                     /gene="Txndc11"
                     /gene_synonym="RGD1307538"
                     /inference="alignment:Splign:2.1.0"
     exon            2010..2152
                     /gene="Txndc11"
                     /gene_synonym="RGD1307538"
                     /inference="alignment:Splign:2.1.0"
     exon            2153..2262
                     /gene="Txndc11"
                     /gene_synonym="RGD1307538"
                     /inference="alignment:Splign:2.1.0"
     exon            2263..2343
                     /gene="Txndc11"
                     /gene_synonym="RGD1307538"
                     /inference="alignment:Splign:2.1.0"
     exon            2344..3074
                     /gene="Txndc11"
                     /gene_synonym="RGD1307538"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gacgtggtga gttcgggtta gtgggcgccg ctggctgaga ggtctgcgag cgacgtgcgg
       61 ggccgggttc ccgggcccga ggtggcggca gcggcggtat aaagccggcc acggggagca
      121 tgtaatgtcg gaatgcggag gccgcggcgg cggcggcggg aacaacagcg aggacgccga
      181 ggacgagggt ggcggcccca agggctccgg ctccctcagc ccggccgggg cggcggcgtc
      241 ctcggagggc aggatccgcc gcggattgcg cggcgcctcg cttatggcgc gccagcggcc
      301 ggagctgctg tgcggcgccg tggctctcgg ctgcgccctg ctcttcgccc tcaaattcac
      361 ctgcagtcga gcaaaagacg tgataatacc agcaaagccg cctgtcagct ttttctcctc
      421 gagatctcca gtccttgacc tcttccaggg gcagctggac tacgctgacc atgtccgcca
      481 ggattctgag gtggtggtgc tgttcttcta tgccccatgg tgcggccagt ccattgcagc
      541 cagggcagaa attgagcagg cagccagccg gctttcagat caggtgttgt tcgtggcagt
      601 aaactgttgg tggaaccagg gcaagtgcag aaaacagaag catttcttct acttccctgt
      661 gatacatctg tatcatcgga gttttggacc aattgaatac aaaggcccca tgagtgctgt
      721 ttacattgag aagtttgttc gccgggtgat gaaacctctt ctctacatcc catctcaatc
      781 agaattgcta gattttctct ccaactatga gcctggagta ctcggctact tcgaattcag
      841 tggctctccc cagcctcctg gatacttgac cttcttcacc tcagcactgc attctttaaa
      901 gaaagattac ctaggaacag tacgatttgg ggttatcaca aataaacatc ttgcgaaact
      961 ggtatcctta gtacactctg gaagtgtgta tttacataga catttcaaca catcacttgt
     1021 cttccccagg gaagtcatga acttcacggc tgagaacatc tataagtggg cctcagaaaa
     1081 ccaggagacc ctcttccgat ggctacaacc ccatggaggc aagagtctgc tgttgaacaa
     1141 tgagctgaag aaaggaccag cactcttcct gttcatacct ttcgatccct tagccgagag
     1201 gcatcctctc ctagatgaga tcaccgaagt ggccttggag tacagtaact gtcgcgggga
     1261 ccaggtggtg gagcgcctcc ttcagcacct gcggcgggca gaagcacccg tgttccagtc
     1321 cctggcacca gagctgcaag ccccactgcc tgatgctcag ctgatggcag cgtccccctg
     1381 ctgtaacaca gtggtactgc cacaggggcc agccctctcc aggacccaca atgtctgtga
     1441 gctgtgtgtc aaccagtcag tgggtaccag gcctagctca gtgagtgtgc cacagtgcag
     1501 cttcttcgag atggcagccg ctctggattc tttctacctc aaggagcaga ctttttatcg
     1561 tgtggtgtca ggcagcatag aatgcagcaa ttttttaact tcctatagtc ctttcagctt
     1621 ctacactgca tgttgcagga ctatatcccg gggcacggca agtttctctg gctctgcaca
     1681 ggacgtcttc acagccccag ccatcgaatt ctctgcctta gagaagagct gtgaggccac
     1741 tgccccgagt tccattcctc acattgagga gaacaggtac cgctttcctg aagtgggcct
     1801 ctctagcaca gccttcacgg gcctgagctg cagaaccaac aagaccctga acatctacct
     1861 tttggattcc aatttatttt ggttatatgc agagagactg ggtgccccaa gctctgctcc
     1921 tgtgaaggag tttgccacaa ttgtcgatgt gaaagaagaa tctcactata tcctggaccc
     1981 caaacaagcc ctcgtgaagc tcactctaga gtcttttatt caaaacttca gtgttctcta
     2041 cagccccttg aaaaggcatc tcactggaag tgattctgcc cagtttccaa ctcagcattt
     2101 aatcactgaa gtgacaactg acaccttctg ggaagtaacc cttcggaaac aggacgttct
     2161 gctgctctat tacacacagt ggtgtggctt ttgcccatct ctcaatcaca tcttcatcca
     2221 gctagctcgg cttctgccag aagacacatt tactgtggcc aggatcgatg tgtctcagaa
     2281 tgatcttcct tgggaattca tggttgaccg tcttcctacc gttttgtttt ttccctgcaa
     2341 tagaaaggac cttagtgtga aataccctgg agacctcccc atcaccctcc cgaatctgct
     2401 gcggttcatt ctgcatcatt cagaccctgc ctctgccccc cagggcctta ccaccagccc
     2461 tcccacccaa gaatgtgccc agagcgcggc cgtcctgcag cgtgaacaca tctctcacgt
     2521 ggagaatgcg atgcaggagc tgcggtctga gatgagcagc ctccgccgta cacaggagca
     2581 ggtagagggc cggctcttta gtgcccgcag ggatgggcac cgcctgcttc gccggcagcg
     2641 gaccctggag caacagcaca ggctactcag gcgccacagc cagaaactgc aggctctgta
     2701 tttgaagaag gctcgagagc tccaggagct ggccagtgcc tcggagaccc ccctccctga
     2761 gcacacatgg ctcaaggtcc ttgtggcaac tatggagagg gagctggagc gccagggtga
     2821 tgctaaggag ccaacacctc tggggaaggc tcaccccaac cactccaagc ccatgggtgc
     2881 aacccagtta cctggtgaca cccctccacc ctctagcgcc agctccactc tggcttcaga
     2941 gaggaagcat gagaacagga cagactaact ttggaatgag atgaaggaac cagaggtgag
     3001 aactgtacat tgggaatata gttatgcaaa ttttattgaa atttattgta aataaagatt
     3061 ttctcagtgg tctaaaaaaa aaaaaaaa
//
