LOCUS       XM_006253531            5300 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus terminal uridylyl transferase 7
            (Tut7), transcript variant X2, mRNA.
ACCESSION   XM_006253531
VERSION     XM_006253531.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006253531.3.
            
            On Jan 21, 2021 this sequence version replaced XM_006253531.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5300
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5300
                     /gene="Tut7"
                     /note="terminal uridylyl transferase 7; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 16 ESTs, 2 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     171 samples with support for all annotated introns"
                     /db_xref="GeneID:501515"
                     /db_xref="RGD:1586015"
     CDS             490..5142
                     /gene="Tut7"
                     /codon_start=1
                     /product="terminal uridylyltransferase 7 isoform X1"
                     /protein_id="XP_006253593.1"
                     /db_xref="GeneID:501515"
                     /db_xref="RGD:1586015"
                     /translation="MGDTAKPYFVKRTKDRGIIDDDDFRRGHPQQDYLMMDDYAKGHS
                     SKMEKGLPKKKMSPGNYGNTPRKGLYAVSSNPYAFKNPMYSQPAWMNDNHKDQNKKWL
                     SDELAGNADSWREFKPGPRIPVLSRSRKESFQESEDTYRWPEGRGCRAVRRLFQKDLA
                     SLEAMTEVEAGSPENKKQRSRPRKPRRTRTEDIEQDGELEGPVIDESVLSTKELLGLQ
                     QAEERLKRDCIERLKRRSRNCPTAKYTCKLCDALIDSIPFAHKHIKEKRHKKNLKEKQ
                     EEELLTTLPPPAPSQIHAVGSAIDRVVQEFGLHNENLDQRLEIKCAMENVFQHKLPDC
                     SLRLYGSSCSRLGFRDSDVNIDVQFPAVMSQPDVLLLVQECLKNSDCFIDVDADFHAR
                     VPVVVCRHKQSGLLCKVSAGNENAWLTTKHLTALGKLEPRLLPLVIAFRYWAKLCSID
                     RPEEGGLPPYVFALMAVFFLQQRKEPLLPVYLGSWIEEFSLNKLGNFSLKDVEKDSVV
                     WEYTDNSTGDTSSPKEEALRETAAKKGQVPLTFNIKHQPSVPVGQLWVELLRFYALEF
                     NLADLVISIRVKELISRESKDWPKKRIAIEDPYSVKRNVARTLNNQPVFEYILHCLRT
                     TYKYFALPHKVTKPNLTKPPSPIICASDPYKEAKNCGPELQVTNIDKLENALVAPDPG
                     VQTSGSCRAQPLTFKKTTEELGSPSKETIRGVHIPVHQESSGCVQAEASYEGFKDATA
                     EQQEAGSDSENSRRKTKHLLSTDDQGLSSSKHPELQNCGSLCGLQADNTLELVGLRNP
                     GAEKCSSFASLDDKADVNERSTEGADERGEALNCFSPSVQSCTSATMHFDEEEEEEEE
                     EEEEEEEEEEPRLRTNLTEDEEGVASENQVDSRYTGSGEDALSEDDDLAEPAKGEDLE
                     ESGEHMGGALLIDLNRITLKEESFFEENSPGDQSEFFYEFRKLTFTKGKSPTVVCSLC
                     KREGHLKKDCPEDFKRIQLEPLPPLTPKFSNILDQVCIQCYKDFSPTIVEDQAREHIR
                     QNLESFIKQDFPGTKLSLFGSSKNGFGFKQSDLDVCMTINGHETAEGLDCVRTIEELA
                     RVLRKHSGLRNILPITTAKVPIVKFSHLRSGLEVDISLYNTLALHNTRLLFAYSAIDP
                     RVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRSPPVIPVLQEIYKGEK
                     KPEILVDGWNIYFFDQINELPTCWPEYGKNTESVGQLWLGLLRFYTEEFDFKEHVISI
                     RRKSLLTTFKKQWTSKYIVIEDPFDLNHNLGAGLSRKMTNFIMKAFINGRRVFGIPVK
                     GFPKDILAYFFDPDVLTEGELAPNDRCCRICGKIGHFMKDCPMRRKVRRRRDQEDTPN
                     QRYTESKEKRSKEDKEIQNKYTEKEVSAKEDKAAPCTAAKAKPMRAAVDLGREKLVRT
                     PAEKWKRQDDRDSREKRCFICGREGHIKKECPQFKGSPGLCKSDYVSSYSSPTPLRPV
                     AQVKASPNLRGELLHPLHSPQPSGVLAAVCWALLAGLWCLLLLCPTYYVVRLIGPW"
ORIGIN      
        1 ggcgctggtg agtgctcccg ggcgccgtct cgtcgcgtcc ctccgggact cgcctccggg
       61 ctgggcccgt gggttccccc cgccccgagg agcgtatctg cccggccccg aggtacgttg
      121 gcgccgtcct tctccggccg cctcggctgg gctgcgcgcc cggagctctc gggttcgagt
      181 ccgtgtcttc actttgtgtc ggggctccgg ccctggtccg ggggaccccg gaaccctgtc
      241 aatggccggg cgcttcctgc ttcctattcc ccacggcggc ttcgtggcca gtagcgcggg
      301 accgcctcct cctcctccgc ctggggactc cgcttgtgga aactgaggca cacaggggtg
      361 gggcagccga atggggaagg aaaaggagtg tcattctgcg gaggattgtg gttggtgacg
      421 aaactggact tggcaggggc tggggactaa gaaacccggt acgaagtaag aaagttgaag
      481 tcatagacca tgggagatac agcaaagcct tattttgtga agcgcactaa agaccgtgga
      541 attattgatg atgatgattt cagaaggggt cacccccaac aagattattt aatgatggat
      601 gattatgcta aaggccatag cagtaaaatg gaaaagggcc ttccaaaaaa aaagatgtcc
      661 cctgggaact atgggaacac ccccaggaaa ggactgtatg cggtctccag caacccatat
      721 gcatttaaaa acccgatgta cagtcagcct gcttggatga acgataacca caaagatcag
      781 aataagaaat ggctgtctga tgaactggct ggaaatgcag atagctggag agagttcaag
      841 cctggaccta ggattcccgt cctaagccgg tcaaggaaag aatcctttca agaaagtgaa
      901 gacacctaca ggtggccaga ggggagaggc tgcagagcag tgagaaggct gtttcagaaa
      961 gacctcgcca gcctagaagc catgacagaa gtggaagcag gaagccctga aaacaagaaa
     1021 cagcggtcca gacctcgtaa gccacggagg actagaacgg aggacattga gcaggacgga
     1081 gagttagaag gtcctgtgat cgacgagtcc gtcctttcaa ccaaggagtt gctgggccta
     1141 cagcaggctg aggagcggct caagagagac tgcattgaga gactgaaaag gcgatcacga
     1201 aattgcccaa cagcaaagta cacctgtaaa ctgtgcgatg ccttgattga ctccatcccg
     1261 ttcgcacata agcacatcaa ggagaagagg cacaagaaga accttaagga aaagcaggaa
     1321 gaagaattgc ttaccacact gcccccacca gcaccctccc agatacatgc agtcggcagc
     1381 gccattgaca gagtggtgca ggagtttggt ttacacaatg aaaacttgga tcagaggcta
     1441 gaaattaagt gtgccatgga aaacgtgttc cagcacaaac taccagactg ttctcttagg
     1501 ctttatggat cgtcctgtag caggctgggc ttcagagact ctgatgtgaa cattgatgtt
     1561 cagtttccag ctgtcatgtc tcagccagat gtcctcttac ttgttcaaga atgtttaaag
     1621 aacagtgact gcttcattga tgttgatgct gatttccatg cccgggttcc tgtggtggta
     1681 tgcagacata agcaaagtgg ccttctttgt aaagtaagtg caggaaacga aaacgcctgg
     1741 ctgaccacaa agcatctaac ggctcttgga aaactggagc caaggctgct tcctctggtg
     1801 attgcgttta gatactgggc aaagctttgt agcatcgatc gccctgaaga aggaggcctg
     1861 ccgccatatg tgtttgctct gatggctgtt ttcttccttc agcaaagaaa agaacctctc
     1921 ttgccagttt atctaggatc atggattgaa gaattctcat taaataaatt agggaatttc
     1981 agccttaaag acgtggagaa agattctgtg gtctgggagt acactgacaa cagcacaggg
     2041 gacaccagct cgccaaaaga ggaagcactc agagagacgg cagcaaagaa ggggcaggtg
     2101 ccattgacat ttaatataaa acatcagcct tcagtgccag tcgggcaact ctgggtggaa
     2161 ttgctgcggt tctatgcttt agagtttaat ctggctgact tagtgatcag tattcgtgtc
     2221 aaagaattga tatcacggga atcaaaggac tggcccaaaa agcgcatcgc gattgaagac
     2281 ccctattctg ttaaaagaaa cgtggcaagg accttgaata accaacctgt gtttgagtac
     2341 atacttcatt gtctgaggac gacatataaa tatttcgctc ttccacacaa agttacaaaa
     2401 cccaacctca caaagcctcc tagcccaatc atctgtgctt cagatcctta taaagaagcg
     2461 aaaaattgtg gcccagagct ccaagtgaca aatattgata aactggaaaa tgcacttgtg
     2521 gctccagatc ctggcgttca aacctcaggt tcctgcaggg cacagccact tacttttaaa
     2581 aaaaccaccg aggagctggg aagcccatca aaggagacga tcagaggtgt ccacattcca
     2641 gtccaccagg aaagctctgg ctgtgtccag gcagaggcca gttatgaggg gtttaaggat
     2701 gccacagcag agcaacagga agcaggaagt gacagcgaga acagcagaag gaagaccaag
     2761 catcttttga gcactgatga ccaaggttta agcagcagca agcacccaga acttcagaac
     2821 tgtggcagcc tctgtggtct ccaggcagac aacactttgg aattagtagg gcttcggaat
     2881 cctggggctg aaaagtgtag cagctttgcc tctttggatg acaaggctga tgtcaatgaa
     2941 agaagcacag aaggtgccga tgaacgagga gaagctctga attgcttttc cccttcagtc
     3001 cagagctgca catcagcaac catgcacttt gatgaggagg aggaggagga agaagaagaa
     3061 gaggaggagg aagaggaaga ggaggagccc aggctcagaa ctaatcttac agaagatgag
     3121 gagggggttg ctagtgaaaa tcaggtggac agcaggtata ctgggtcagg tgaggacgcc
     3181 ctctctgaag acgatgattt ggctgagcct gctaagggtg aagacctgga agaaagtgga
     3241 gaacacatgg gtggggctct gctcatagac ctaaatagaa taactcttaa agaagaaagt
     3301 ttttttgagg aaaattcacc tggggaccag tctgagttct tctatgaatt taggaaactg
     3361 accttcacca aaggcaagtc tcccacagta gtgtgcagct tgtgtaagcg agagggtcac
     3421 ctaaagaagg actgtcctga ggacttcaag aggatccagc tggaaccttt gccacccctg
     3481 acacccaagt tctcaaatat cttagatcaa gtgtgcatcc agtgttacaa ggatttctct
     3541 ccaaccattg tagaagatca ggctcgcgaa catatccggc aaaatctaga aagtttcata
     3601 aaacaggatt ttccaggaac taaattgagc ttgtttggct cctccaaaaa tggatttggg
     3661 ttcaaacaga gtgaccttga cgtctgtatg acgattaacg gacatgagac tgctgagggg
     3721 ttggactgtg tgagaactat tgaagaactg gcacgggtcc tcagaaagca ctcaggactg
     3781 aggaacatcc tgcccatcac aacagccaag gtgcccatcg tgaagttctc ccatctgaga
     3841 agcgggctgg aggtggacat cagtctgtat aacacactgg ctcttcacaa cacgcggctc
     3901 ctgtttgcat actcagccat tgaccccaga gtgaaatacc tgtgctacac catgaaagtg
     3961 ttcacaaaga tgtgtgacat cggtgacgcg tccagaggca gcttgtcatc atacgcttac
     4021 actcttatgg tgctgtactt cctccagcag cggtcccccc ctgtcatccc tgtgcttcag
     4081 gagatataca aaggtgaaaa gaaaccagaa atacttgttg atggctggaa tatctacttt
     4141 ttcgatcaaa taaatgaact gcccacttgt tggccagaat atggaaaaaa tacagaatct
     4201 gttgggcagc tgtggttggg acttctacgc ttctacactg aggagtttga ctttaaggaa
     4261 cacgtaatca gcatcagaag aaaaagtctg cttacaactt ttaagaaaca gtggacctca
     4321 aaatacatcg tcattgaaga tccctttgat ttgaaccaca atcttggtgc tggattatca
     4381 aggaaaatga caaattttat aatgaaagct tttatcaatg gtagaagagt atttggaatt
     4441 ccagtcaaag gatttccaaa ggacatcctg gcatacttct ttgatccgga tgtcctgact
     4501 gagggagaac tggccccaaa tgacaggtgc tgccggatct gtgggaaaat tggccacttc
     4561 atgaaggact gtcccatgag gagaaaagtg aggcggcggc gagaccagga agatacccca
     4621 aaccaaaggt acacagagag caaagaaaaa agaagcaaag aggacaaaga aattcagaac
     4681 aagtacacag aaaaggaagt gtcagcaaaa gaagacaagg ctgcaccgtg cacagctgcc
     4741 aaagccaagc caatgagggc agctgttgac ctgggccggg agaaacttgt caggacacca
     4801 gccgaaaagt ggaagagaca ggatgacaga gactcaagag aaaagcgctg tttcatctgt
     4861 ggaagagagg gacacattaa aaaggaatgc ccacaattca aaggctctcc aggtttgtgt
     4921 aagtctgatt atgtgtcttc gtattcttca cctacccctt tgagaccagt tgctcaggta
     4981 aaagccagcc caaacctgag aggagagctc ctccatcctc ttcactcccc acagccttct
     5041 ggagtgcttg cagctgtgtg ctgggccctc ctggctggcc tctggtgctt actccttctg
     5101 tgtcccacat actatgtggt aaggcttatt gggccctggt agtaggggct tggtagatgg
     5161 ctcctgcata catgtctgtc tttccaacta acatgcaaac ttgtgccacg cgtgtgccta
     5221 atcccagccc ttcttggata cagtttgagg ctgtttctgt tggttttacc ttcagttttt
     5281 gtaaaccagt ctatttcatt
//
