LOCUS       NM_001107516            3701 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus tubulin gamma complex component 5 (Tubgcp5),
            mRNA.
ACCESSION   NM_001107516 XM_001053658 XM_218711
VERSION     NM_001107516.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3701)
  AUTHORS   Jakobsen,L., Vanselow,K., Skogs,M., Toyoda,Y., Lundberg,E.,
            Poser,I., Falkenby,L.G., Bennetzen,M., Westendorf,J., Nigg,E.A.,
            Uhlen,M., Hyman,A.A. and Andersen,J.S.
  TITLE     Novel asymmetrically localizing components of human centrosomes
            identified by complementary proteomics methods
  JOURNAL   EMBO J 30 (8), 1520-1535 (2011)
   PUBMED   21399614
REFERENCE   2  (bases 1 to 3701)
  AUTHORS   Murphy,S.M., Preble,A.M., Patel,U.K., O'Connell,K.L., Dias,D.P.,
            Moritz,M., Agard,D., Stults,J.T. and Stearns,T.
  TITLE     GCP5 and GCP6: two new members of the human gamma-tubulin complex
  JOURNAL   Mol Biol Cell 12 (11), 3340-3352 (2001)
   PUBMED   11694571
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474036.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001053658.1, XM_218711.4.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132272,
                              SAMD00132280 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3701
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q22"
     gene            1..3701
                     /gene="Tubgcp5"
                     /note="tubulin gamma complex component 5"
                     /db_xref="GeneID:308663"
                     /db_xref="RGD:1304689"
     exon            1..262
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
     CDS             117..3191
                     /gene="Tubgcp5"
                     /note="tubulin, gamma complex associated protein 5"
                     /codon_start=1
                     /product="gamma-tubulin complex component 5"
                     /protein_id="NP_001100986.1"
                     /db_xref="GeneID:308663"
                     /db_xref="RGD:1304689"
                     /translation="MARPKSSGSRMDRQLEHDVRELVRQVTGLQDEADSNFQMALDFA
                     WSNFRFHRFLDVNSHKVEKTIEGIYEKLTIHSDLSKAASWKRLTKEFLNVALPSTEKI
                     KTDTHYSILSLLLCLSDSPSNSNYVETPREKEVEKKDDFDWGKYLMEGEEVGLGPDMD
                     TPNWSEDSDDEDTQQPLSREDSGIQVDRTPLEEQDHNRKGGLQVCWEDEPDSRSWLEQ
                     HVVHQYWTTRRSRIPHSSHLHSNLAAVWDQHLYSSDPLYVPDDRVVVTETQVIRETLW
                     LLSGVKKLFIFQLIDGKVTVRDNIIVTHLTHSCLRSVLEQIAAYGQVVFRLQEFIDEV
                     MGHSSESPSPGNGPIPKKTPDAPFRTYQAFMWALYKYFINFKEELTEIEKSVISNDTT
                     ITLAIVVNKLAPRLAQLKVLDKVFSTGVAEVPPDTRNVVRASHLLNTLYKAILEYDNV
                     GEASEQTVSLLFSLWVETVRPYLQTVDEWIVHGHLWDGAREFIIQRNKNVPVNHRDFW
                     YATYTLYSVSEKTENEDKVSDSASASSGSDQGPSSRQHTMVSFLKPVLKQIIMAGKSM
                     QLLKNLNCAEGSACQAAARDAERKSLYTLFLESIQLRLQHGEDSTTHILNEEQATKEN
                     LIKMQSIAERHLELDDIHDPLLAINFARLYLEQSDFHEKFAGGDICVDRSSESVTCQT
                     FELTLRSCLYPHIDKQYLHCCGNLMQTLKRDFRLVEYLQAMRNFFLMEGGDTMYDFYT
                     SIFDKIREKETWQNVSFLNVQLQEAVGQRYPEDSLRLSISFENVDTTKKKLPVHILDG
                     LTLSYKVPWPVDIVISVECQKIYNQVFLLLLQIKWAKYSLDVLLFGELANAAEKSQAK
                     EDVLRDQDTPAQFGPPKESLRQQIHRMFLLRVKLMHFVNSLHNYIMTRILHSTGLEFQ
                     HQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNLALMFAEGWQAGL
                     GAWQMESIEKMESDFKNCHMFLVTILNKAVCRGSFPHLESLALSLMAGMEQS"
     exon            263..316
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
     exon            317..425
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
     exon            426..522
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
     exon            523..602
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
     exon            603..738
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
     exon            739..853
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
     exon            854..943
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
     exon            944..1037
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
     exon            1038..1284
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
     exon            1285..1487
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
     exon            1488..1603
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
     exon            1604..1872
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
     exon            1873..2071
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
     exon            2072..2260
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
     exon            2261..2443
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
     exon            2444..2528
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
     exon            2529..2649
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
     exon            2650..2828
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
     exon            2829..2954
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
     exon            2955..3043
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
     exon            3044..3144
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
     exon            3145..3701
                     /gene="Tubgcp5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgcctgaac gctcccggaa acagtctcca aatctcgaaa gcccagtgcc gcgacaagca
       61 gaactctcgc gagaacagtc gccgcttagc ggagacctga taggtaggtc gtgggtatgg
      121 cccggcctaa gtcgtccggg agccggatgg acagacaact ggaacacgat gtgcgtgagc
      181 tcgtccggca ggtcactggc ctgcaggatg aggcggattc caacttccaa atggccctgg
      241 acttcgcctg gtccaacttc agatttcatc gtttcttgga tgtcaacagt cacaaagtag
      301 aaaaaacaat agaaggaatt tatgagaaac tcaccatcca ttctgatctc agcaaagctg
      361 ctagttggaa gagattaact aaggagtttc taaatgtagc tcttcccagc acagagaaaa
      421 taaagacaga tacacattat tccatactgt cactccttct gtgtctgtct gattctcctt
      481 caaacagcaa ttatgtggaa acaccgagag agaaagaagt ggaaaagaag gatgattttg
      541 actggggaaa atacttgatg gaaggtgaag aagttggcct tggtccagat atggacacac
      601 cgaattggtc tgaagacagt gacgatgaag atacccagca gcccttaagc agagaagact
      661 ctgggataca ggtagacagg actccattag aagaacaaga ccacaacaga aaaggaggcc
      721 ttcaagtctg ctgggaagat gagccagata gccggagctg gctggaacag catgtagtcc
      781 atcagtactg gacaaccagg cgctcccgga ttccacacag ttcacatttg cactccaatt
      841 tagctgctgt ctgggaccaa cacctgtaca gcagtgaccc gctctatgtt ccagatgaca
      901 gggtggtagt tactgagaca caggtcattc gggaaaccct atggttactt tcaggggtaa
      961 aaaagctgtt tatatttcag ttgatagatg gaaaggtaac tgtgagagac aatattatcg
     1021 taactcattt aacacacagc tgtttacgat ctgtgctgga acagatagca gcatatggcc
     1081 aggttgtgtt tcggctccag gagttcatcg atgaagtcat ggggcacagc tctgaaagtc
     1141 catcaccagg aaatggtccc atacctaaga agacacctga cgctcctttt aggacctacc
     1201 aggcgttcat gtgggccctc tacaaatact tcattaactt caaggaggag cttacagaga
     1261 ttgagaagag tgttatcagt aatgatacaa caataacact tgcaatagtg gtgaacaagt
     1321 tggcacctcg attggcgcag ctaaaggtcc tggacaaagt gtttagcact ggagtggcag
     1381 aagttccacc tgatactcgc aatgtcgtcc gggcgtctca cctgcttaac accctgtaca
     1441 aggccattct tgaatatgac aatgttggag aagcctctga acaaactgtc tccctcctgt
     1501 tctctctctg ggtggaaaca gtgaggccct acctacagac tgtagatgaa tggatcgtcc
     1561 atggacacct gtgggatggt gcaagggagt ttatcataca gaggaataaa aatgttccgg
     1621 taaatcacag agacttctgg tacgcaacat acacactcta tagcgtgtca gagaagacgg
     1681 agaatgaaga caaagtgagt gacagtgcca gtgccagctc tggcagtgac caggggccct
     1741 ccagccgaca gcacaccatg gtgtccttcc tcaagcctgt cctgaagcag atcataatgg
     1801 ctggcaagtc aatgcaactg ctgaagaacc tcaactgtgc agagggctct gcatgtcagg
     1861 cagcagccag agatgcagaa agaaaaagct tatataccct ctttctggaa tctatacagt
     1921 tacgtcttca gcatggagaa gattctacta cacacattct taatgaagaa caagcaacca
     1981 aagaaaacct aataaagatg cagtccattg ctgaaaggca ccttgagcta gatgacattc
     2041 acgacccact gttggccatc aactttgcaa ggttgtattt ggagcagagt gactttcatg
     2101 agaagtttgc tggtggtgac atatgtgtgg acagatcatc agaatctgtg acctgccaga
     2161 cttttgaatt aacgctgagg tcttgcctct atcctcacat tgataaacag tatctacatt
     2221 gctgtggaaa cctcatgcag accttaaaga gagatttcag gctagtggaa tacttgcagg
     2281 ccatgaggaa ttttttcttg atggaaggtg gagacaccat gtatgacttc tatacttcaa
     2341 tttttgataa aataagagaa aaggaaacct ggcaaaatgt gtcttttcta aatgttcagc
     2401 tccaagaagc agtaggacaa cgctatcctg aagacagttt acgtttatct atatcttttg
     2461 aaaatgttga tacaactaag aagaaactac ccgttcatat cttagatggt cttaccctaa
     2521 gctacaaggt cccatggcct gtggacattg ttataagtgt agaatgtcaa aaaatctata
     2581 atcaggtgtt ccttcttcta ctgcaaataa aatgggcaaa atacagcctg gatgttctac
     2641 tgtttggtga actggctaat gctgctgaaa aatcccaagc aaaggaagac gttctgcgtg
     2701 accaagatac acccgcccag ttcggaccac caaaagagtc attaagacaa cagattcatc
     2761 gaatgtttct cttaagagtg aagctcatgc actttgtaaa tagtttacac aactacatca
     2821 tgaccaggat tcttcacagt accgggctgg agtttcagca tcaagttgag gaagccaagg
     2881 atttagatca gttgattaaa atccactaca ggtatttgtc aaccatccat gaccgatgtc
     2941 tgctgagaga aaaggtcagc ttcgtgaaag aagccattat gaaagtgttg aacttggcgc
     3001 tcatgtttgc agaaggttgg caggcaggcc taggggcttg gcaaatggaa tctatagaga
     3061 aaatggaatc tgactttaaa aactgccaca tgtttctggt aaccatttta aataaagctg
     3121 tctgtagagg atcttttccc cacctggaat ctctcgcatt gtcactcatg gctggcatgg
     3181 agcaaagtta aatttctcta atttaacaag taccttagac ctcatcatca tccatgtaca
     3241 cagtcactgt ttacagctga gaaataagaa cctttttatt tttattgtta aacttgtcta
     3301 gataaatgga ttgtaggtat ttttctgaag gttattatca agaatgtaga gttatgtata
     3361 taatgttgta tatctaattg caaaatatat gtgttgtata tatttctttt cttctaaaag
     3421 attgacttat ttaatgtata tgagtatttt gcctgctttt acatatgtgc atacccggtg
     3481 ctcagaggca ataaaagggt gtcagatacc tcctctctaa aaggtgtctt agatttgaca
     3541 tccctgaagc atttttatgt gcatagaaaa tcccaaaaga aaaatgtcaa tgtataaact
     3601 gtactttact taaggccagc tgttatatat caatttttgg catttattag ccaaccagta
     3661 atatctcaaa taaaagtatg tatatcgttc acttttccca c
//
