LOCUS       NM_001107323            3647 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus tubulin gamma complex component 3 (Tubgcp3),
            mRNA.
ACCESSION   NM_001107323 XM_001067383 XM_006253440 XM_225013
VERSION     NM_001107323.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3647)
  AUTHORS   Jakobsen,L., Vanselow,K., Skogs,M., Toyoda,Y., Lundberg,E.,
            Poser,I., Falkenby,L.G., Bennetzen,M., Westendorf,J., Nigg,E.A.,
            Uhlen,M., Hyman,A.A. and Andersen,J.S.
  TITLE     Novel asymmetrically localizing components of human centrosomes
            identified by complementary proteomics methods
  JOURNAL   EMBO J 30 (8), 1520-1535 (2011)
   PUBMED   21399614
REFERENCE   2  (bases 1 to 3647)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   3  (bases 1 to 3647)
  AUTHORS   Tassin,A.M., Celati,C., Moudjou,M. and Bornens,M.
  TITLE     Characterization of the human homologue of the yeast spc98p and its
            association with gamma-tubulin
  JOURNAL   J Cell Biol 141 (3), 689-701 (1998)
   PUBMED   9566969
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000016.1.
            
            On or before Apr 10, 2021 this sequence version replaced
            XM_006253440.4, NM_001107323.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.2891542.1,
                                           SRR26643286.42220.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-147               JAXUCZ010000016.1  83553985-83554131
            148-255             JAXUCZ010000016.1  83564303-83564410
            256-323             JAXUCZ010000016.1  83567207-83567274
            324-401             JAXUCZ010000016.1  83570240-83570317
            402-607             JAXUCZ010000016.1  83571256-83571461
            608-777             JAXUCZ010000016.1  83572891-83573060
            778-896             JAXUCZ010000016.1  83574743-83574861
            897-1022            JAXUCZ010000016.1  83575361-83575486
            1023-1091           JAXUCZ010000016.1  83578420-83578488
            1092-1224           JAXUCZ010000016.1  83578801-83578933
            1225-1391           JAXUCZ010000016.1  83579797-83579963
            1392-1502           JAXUCZ010000016.1  83585392-83585502
            1503-1611           JAXUCZ010000016.1  83585794-83585902
            1612-1801           JAXUCZ010000016.1  83586902-83587091
            1802-1937           JAXUCZ010000016.1  83588833-83588968
            1938-2006           JAXUCZ010000016.1  83589656-83589724
            2007-2142           JAXUCZ010000016.1  83593846-83593981
            2143-2231           JAXUCZ010000016.1  83601663-83601751
            2232-2363           JAXUCZ010000016.1  83601835-83601966
            2364-2504           JAXUCZ010000016.1  83605147-83605287
            2505-2621           JAXUCZ010000016.1  83612591-83612707
            2622-3647           JAXUCZ010000016.1  83613601-83614626
FEATURES             Location/Qualifiers
     source          1..3647
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16q12.5"
     gene            1..3647
                     /gene="Tubgcp3"
                     /note="tubulin gamma complex component 3"
                     /db_xref="GeneID:306599"
                     /db_xref="RGD:1305726"
     exon            1..147
                     /gene="Tubgcp3"
                     /inference="alignment:Splign:2.1.0"
     CDS             72..2780
                     /gene="Tubgcp3"
                     /note="tubulin, gamma complex associated protein 3"
                     /codon_start=1
                     /product="gamma-tubulin complex component 3"
                     /protein_id="NP_001100793.2"
                     /db_xref="GeneID:306599"
                     /db_xref="RGD:1305726"
                     /translation="MATPDQKSPNVLLQNLCCRILGRSEADVAQQFQFAVRVIGSNFA
                     PTVERDEFLVAEKIKKELIRQRREADAALFSELHRKLHSQGVLKNKWSILYLLLNLSE
                     DPRKQASKVTSYASLFAQALPRDAHSTPYYCARPQTLPLNYQDRSTQSSGSLGSSGIS
                     SIGMCGLSGPTPVQPFLPGQSHQAPGVGDGLRQQLGPRLAWTLTGNQPSQTPTSKAFP
                     NALSRNLTRSRREGDPGGTSEVTEAALVRDILYVFQGIDGKNIKMSSTENCYKVEAKA
                     NLSKSLRDTAVRLAELGWLHNKIRKYADQRSLDRSFGLVGQSFCAALHQELKEYYRLL
                     SVLHSQLQLEDDQGVNVGLESSLTLRRLLVWTYDPKIRLKTLAALVDHCQGRKGGELA
                     SAVHAYTKTGDPYMKSLVQHILSLVSHPVLSFLYRWIYDGELEDTYHEFFVASDPTVK
                     TDRLWHDKYTLRKSMIPSFITMDQSRKVLLIGKSINFLHQVCHDQTPTTKMIAVTKSA
                     ESPRDAADLFTDLENAFQGKIDAAYFETSKYLLDVLNRKYSLLEHMQAMRRYLLLGQG
                     DFIRHLMDLLKPELVRPATTLYQHNLTGILETAVRATNAQFDSPEILKRLDVRLLEVS
                     PGDTGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNFLWRAKRMEYILTDIRKGHMCN
                     AKLLRNMPEFSGVLHQCHILASEMVHFIHQMQYYITFEVLECSWDELWNRVQQAQDLD
                     HIIAAHEAFLDTITSRCLLDSNSRVLLNQLRAVFDQIIELQNAQDTMYRAALEELQRR
                     LQFEEKKKQRETEGQWGVTAAEEEEENKRIREFQDSIPKMCSQLRILTHFYQGVVQQF
                     LVLLTTSSDESLQFLSFRLDFNEHYKAREPRLRVSLGSRGRRSSHT"
     exon            148..255
                     /gene="Tubgcp3"
                     /inference="alignment:Splign:2.1.0"
     exon            256..323
                     /gene="Tubgcp3"
                     /inference="alignment:Splign:2.1.0"
     exon            324..401
                     /gene="Tubgcp3"
                     /inference="alignment:Splign:2.1.0"
     exon            402..607
                     /gene="Tubgcp3"
                     /inference="alignment:Splign:2.1.0"
     exon            608..777
                     /gene="Tubgcp3"
                     /inference="alignment:Splign:2.1.0"
     exon            778..896
                     /gene="Tubgcp3"
                     /inference="alignment:Splign:2.1.0"
     exon            897..1022
                     /gene="Tubgcp3"
                     /inference="alignment:Splign:2.1.0"
     exon            1023..1091
                     /gene="Tubgcp3"
                     /inference="alignment:Splign:2.1.0"
     exon            1092..1224
                     /gene="Tubgcp3"
                     /inference="alignment:Splign:2.1.0"
     exon            1225..1391
                     /gene="Tubgcp3"
                     /inference="alignment:Splign:2.1.0"
     exon            1392..1502
                     /gene="Tubgcp3"
                     /inference="alignment:Splign:2.1.0"
     exon            1503..1611
                     /gene="Tubgcp3"
                     /inference="alignment:Splign:2.1.0"
     exon            1612..1801
                     /gene="Tubgcp3"
                     /inference="alignment:Splign:2.1.0"
     exon            1802..1937
                     /gene="Tubgcp3"
                     /inference="alignment:Splign:2.1.0"
     exon            1938..2006
                     /gene="Tubgcp3"
                     /inference="alignment:Splign:2.1.0"
     exon            2007..2142
                     /gene="Tubgcp3"
                     /inference="alignment:Splign:2.1.0"
     exon            2143..2231
                     /gene="Tubgcp3"
                     /inference="alignment:Splign:2.1.0"
     exon            2232..2363
                     /gene="Tubgcp3"
                     /inference="alignment:Splign:2.1.0"
     exon            2364..2504
                     /gene="Tubgcp3"
                     /inference="alignment:Splign:2.1.0"
     exon            2505..2621
                     /gene="Tubgcp3"
                     /inference="alignment:Splign:2.1.0"
     exon            2622..3647
                     /gene="Tubgcp3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tggcggcgcc gtagtcaggg cgcgagatcc tggggtacgg ggaggctgca gtgcgcagtc
       61 cgggagcggt aatggcgaca ccggatcaga agtcgcccaa tgttctgctg cagaacctgt
      121 gctgccggat cctaggccgg agcgaagccg atgttgctca gcagttccag tttgctgtga
      181 gagtcatcgg aagcaacttt gctccaactg ttgaaagaga tgaatttcta gtagctgaaa
      241 aaatcaagaa agaacttatt cgacaaagga gagaagcgga cgccgcactg ttttcagagc
      301 tccaccgaaa gcttcattcg cagggagttt tgaagaataa atggtcaatc ctctacctct
      361 tgctgaacct cagtgaggat cctcggaagc aagccagcaa ggtaactagc tatgcctcct
      421 tatttgcaca agccttaccg agagacgctc actcgacgcc ttactactgt gccaggcctc
      481 agaccctccc cttgaactac caggaccgca gcacacagag ctctggcagc ttgggcagca
      541 gcggcatcag cagtatcggc atgtgtggcc ttagcggccc cacacctgtg cagcctttcc
      601 tccccggaca gtctcatcaa gctccaggag tgggtgacgg ccttcggcag cagctggggc
      661 ctcgtctagc atggactctg actggaaatc agccttcaca gacccctacc tccaaggctt
      721 tcccaaatgc tctttctcga aacctgacaa ggtcaaggag agaaggggat ccaggtggca
      781 catcggaagt aactgaagca gctcttgtga gagacattct ctacgtattc cagggcattg
      841 acggcaaaaa catcaaaatg agcagcactg aaaactgtta caaagtggaa gcgaaggcaa
      901 atctaagtaa gtccttgcgg gacacggcgg tccggcttgc tgaattgggg tggctacata
      961 ataaaatcag gaagtatgct gaccagagga gtctggaccg ctcgtttgga cttgtagggc
     1021 agagtttttg tgctgcgttg caccaagagc tcaaagaata ctacaggctc ctctctgttc
     1081 tgcactccca gctccagcta gaagatgatc agggtgtgaa tgtgggactg gagagtagcc
     1141 tcacactgcg gcgcctcctg gtttggacat atgatcccaa aataagatta aagacccttg
     1201 ctgcgctggt agatcactgc caaggacgga aggggggtga gctggcctct gctgttcacg
     1261 cctacacaaa gacaggggac ccctacatga agtccctggt gcagcacatt ctgagcttag
     1321 tgtctcaccc tgtcctgagc ttcctctacc gatggatata cgacggggag ttggaggaca
     1381 cttaccatga attttttgtg gcgtcagatc caacagttaa aaccgaccgt ctgtggcatg
     1441 acaagtacac cctgaggaaa tcaatgatcc cttcctttat tacgatggac cagtctagga
     1501 aggtcctttt gataggaaag tcaataaatt tcttgcacca agtttgtcat gatcagacac
     1561 ctactacaaa aatgatagct gtgaccaagt cggcagagtc acctcgtgac gctgcggact
     1621 tattcacaga cttagaaaat gcatttcaag ggaaaattga tgctgcttat tttgagacca
     1681 gcaaatacct gttggatgtc ctcaacagaa agtacagtct gctggagcac atgcaggcca
     1741 tgcgccggta cctgctgctt ggccaaggag acttcatacg gcacctaatg gatctgctaa
     1801 aaccagaact tgttcggccc gcaacaactt tgtatcagca taacttgacg gggattcttg
     1861 aaactgctgt aagagccacc aatgcccagt ttgacagccc ggagatcctt aagagactag
     1921 atgtgaggct gctggaagtc tctcctggtg acactgggtg ggatgtcttc agcctggatt
     1981 accacgtcga cggaccaatt gccactgtgt tcacacgaga gtgcatgagc cactacctga
     2041 gagtgtttaa tttcctgtgg agggccaagc gcatggagta catcctcact gacatccgga
     2101 aaggacacat gtgcaatgcg aaactcctga ggaacatgcc agagttctcc ggggtgcttc
     2161 accagtgcca catcctggcc tcggagatgg tgcacttcat ccatcagatg cagtactaca
     2221 tcacctttga ggttctcgag tgctcctggg atgagctctg gaacagagtg cagcaagccc
     2281 aggacttgga ccacattatc gcggcacacg aggcgttcct ggacaccatc acatcccgct
     2341 gtctcctgga cagcaactcc agggtgcttt taaaccaact gagagccgtg tttgatcaaa
     2401 tcattgaact tcagaacgcc caagacacaa tgtacagagc tgctctggag gagctgcaga
     2461 ggcggctgca atttgaagag aagaagaaac agcgtgaaac tgagggccag tggggagtga
     2521 ctgcggcaga ggaagaggaa gagaacaaga ggatccgaga attccaggac tccataccaa
     2581 aaatgtgttc ccagttgcga atactgacgc acttctacca gggtgtggta cagcagtttc
     2641 tggtgttgct cacaaccagc tctgatgaaa gtctccagtt tctcagcttc agattggact
     2701 tcaatgaaca ttacaaagcc agagaaccca ggctgcgggt ttctctgggc agtagggggc
     2761 ggcgcagttc ccacacgtga ggctggcacg ggctagtaga tgcttactca agccgggacc
     2821 ttcaggctgg tgtgagctgc aggagcctcc tgtctgcaca caggccacag tgttcagcac
     2881 catgtccgct gaagaagtct tgttatccac tggacttgcg tgtctgtaac accaccgagt
     2941 tcaacaggcc acttacctac catgtagtct tcgtagtcga aagacgctgt gatatgtcgg
     3001 aacatcttac ttccaccacg taatttatat ttgtcagtta aaaacaacaa caacaacaaa
     3061 ctgtttctta ccacaaaaaa ctaggtcagt ggtgtgttca taaactaagg taatgtcacc
     3121 gctattcttt ctcattctgt agagacagtt tttgttatca tgacactaaa tgaaacatgt
     3181 ctctgagaaa tacacaggct gtttacctgg cttcagtgtt tagaacacga gcctgcgtga
     3241 ggacatccac cccaagcgtc gccccccact gttgtcactt cctcccagag tttacacttt
     3301 tatatttact ttacccttca aatcacattt caaagagcgg gagccatgtg gagggaggtt
     3361 tcctcggctc gcccagccac agaccaccag ctgagcggat gtgaaccaag caggccgact
     3421 gttttatttt caaagttctg ataagtgtta ggaagaagtc agcttggata ttgaaggttt
     3481 cccttctcct tgcctatttt ttcattgtaa atatttatat actactgacc agatgatgga
     3541 gggaactttt ttttttgtaa aaatgtctta tccagtcata taattatgcc ttttttatgt
     3601 tgcataagtg ataacttaga gaattaaaaa ccattatctt tcaggtg
//
