LOCUS       NM_001399488            1645 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus tubulin, gamma 2 (Tubg2), mRNA.
ACCESSION   NM_001399488 XM_006247427
VERSION     NM_001399488.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1645)
  AUTHORS   Bharti,P., Schliebs,W., Schievelbusch,T., Neuhaus,A., David,C.,
            Kock,K., Herrmann,C., Meyer,H.E., Wiese,S., Warscheid,B., Theiss,C.
            and Erdmann,R.
  TITLE     PEX14 is required for microtubule-based peroxisome motility in
            human cells
  JOURNAL   J Cell Sci 124 (Pt 10), 1759-1768 (2011)
   PUBMED   21525035
REFERENCE   2  (bases 1 to 1645)
  AUTHORS   Cheng,A., Zhang,M., Gentry,M.S., Worby,C.A., Dixon,J.E. and
            Saltiel,A.R.
  TITLE     A role for AGL ubiquitination in the glycogen storage disorders of
            Lafora and Cori's disease
  JOURNAL   Genes Dev 21 (19), 2399-2409 (2007)
   PUBMED   17908927
REFERENCE   3  (bases 1 to 1645)
  AUTHORS   Illenye,S. and Heintz,N.H.
  TITLE     Functional analysis of bacterial artificial chromosomes in
            mammalian cells: mouse Cdc6 is associated with the mitotic spindle
            apparatus
  JOURNAL   Genomics 83 (1), 66-75 (2004)
   PUBMED   14667810
REFERENCE   4  (bases 1 to 1645)
  AUTHORS   Di Fiore,B., Ciciarello,M., Mangiacasale,R., Palena,A.,
            Tassin,A.M., Cundari,E. and Lavia,P.
  TITLE     Mammalian RanBP1 regulates centrosome cohesion during mitosis
  JOURNAL   J Cell Sci 116 (Pt 16), 3399-3411 (2003)
   PUBMED   12840069
  REMARK    Erratum:[J Cell Sci. 2003 Sep 1;116(Pt 17):3659]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Jan 10, 2022 this sequence version replaced XM_006247427.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360176.1940919.1,
                                           SRR26360172.1993604.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760393, SAMEA5760433
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-154               JAXUCZ010000010.1  86591610-86591763
            155-267             JAXUCZ010000010.1  86592040-86592152
            268-435             JAXUCZ010000010.1  86592344-86592511
            436-504             JAXUCZ010000010.1  86592817-86592885
            505-584             JAXUCZ010000010.1  86593161-86593240
            585-711             JAXUCZ010000010.1  86594796-86594922
            712-798             JAXUCZ010000010.1  86596106-86596192
            799-948             JAXUCZ010000010.1  86596300-86596449
            949-1101            JAXUCZ010000010.1  86596883-86597035
            1102-1263           JAXUCZ010000010.1  86597114-86597275
            1264-1645           JAXUCZ010000010.1  86597484-86597865
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q31"
     gene            1..1645
                     /gene="Tubg2"
                     /note="tubulin, gamma 2"
                     /db_xref="GeneID:680991"
                     /db_xref="RGD:1585798"
     exon            1..154
                     /gene="Tubg2"
                     /inference="alignment:Splign:2.1.0"
     CDS             106..1461
                     /gene="Tubg2"
                     /codon_start=1
                     /product="tubulin gamma-2 chain"
                     /protein_id="NP_001386417.1"
                     /db_xref="GeneID:680991"
                     /db_xref="RGD:1585798"
                     /translation="MPREIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEG
                     TDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSSYAKLYNPENIYLSEHGGGAGN
                     NWARGFSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDR
                     YPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRL
                     HIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPL
                     TTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVH
                     KSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFESSC
                     QQYDKLWKRGAFLEQFRKEDIFKDNFEEMDRSREVVQELIDEYHAATRPDYISWGTQE
                     Q"
     exon            155..267
                     /gene="Tubg2"
                     /inference="alignment:Splign:2.1.0"
     exon            268..435
                     /gene="Tubg2"
                     /inference="alignment:Splign:2.1.0"
     exon            436..504
                     /gene="Tubg2"
                     /inference="alignment:Splign:2.1.0"
     exon            505..584
                     /gene="Tubg2"
                     /inference="alignment:Splign:2.1.0"
     exon            585..711
                     /gene="Tubg2"
                     /inference="alignment:Splign:2.1.0"
     exon            712..798
                     /gene="Tubg2"
                     /inference="alignment:Splign:2.1.0"
     exon            799..948
                     /gene="Tubg2"
                     /inference="alignment:Splign:2.1.0"
     exon            949..1101
                     /gene="Tubg2"
                     /inference="alignment:Splign:2.1.0"
     exon            1102..1263
                     /gene="Tubg2"
                     /inference="alignment:Splign:2.1.0"
     exon            1264..1645
                     /gene="Tubg2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggcggacag cgcgttcccc atgtcctgcg cctctggctg gcaggagttc ctctcagccg
       61 tgacccccgc ccggccaggc cagacgagct cccgtctgat cggagatgcc ccgggagatc
      121 atcaccctgc agctgggcca gtgcggcaac cagattgggt tcgaattctg gaaacagctg
      181 tgtgctgagc atggcatcag cccggagggc atcgtagagg agttcgccac cgagggcact
      241 gaccgcaagg acgtcttttt ctaccaggca gacgatgagc attacatccc ccgggctgtg
      301 ctgctggatc tggagccccg ggtgatccat tccatcctca actcctccta tgccaagctc
      361 tacaacccag agaacatcta cctgtccgag catggaggag gggctggcaa caactgggcc
      421 aggggattct cccagggcga gaaaattcac gaggacatct ttgacatcat agaccgagaa
      481 gcagatggaa gtgacagtct agagggattt gtgctgtgtc actccattgc tggggggaca
      541 ggttccggtc tgggctccta cctcttagag cgactgaatg acaggtaccc caagaaattg
      601 gtgcagacct actctgtgtt tcccaaccag gatgagatga gtgacgtggt ggtccagccc
      661 tacaactccc tcctcaccct aaagaggctg acccagaacg cggactgtgt ggtggtgctg
      721 gacaacacgg ccctgaaccg gatcgccaca gaccgcctgc acatccagaa cccatccttc
      781 tcccagatca accagctggt gtccaccatc atgtcagcca gcaccaccac cctgcgctac
      841 cccggataca tgaacaacga cctcatcggc ctcatcgcct cactcattcc cacccctcga
      901 ctacacttcc tcatgactgg ctataccccc ctcaccacgg accagtcagt ggccagtgtg
      961 aggaagacaa cagttctgga tgtcatgagg agactgctac agcccaagaa cgtgatggtg
     1021 tccacaggcc gggatcgtca gaccaaccac tgctacatcg ccatcctcaa catcatccag
     1081 ggagaggtgg accccaccca ggttcacaag agcctgcaga ggatccggga gaggaagttg
     1141 gccaacttta tcccctgggg cccggccagc atccaggtgg ccctgtcaag gaagtctccc
     1201 tacctgccct cagcccaccg ggtcagcggg ctcatgatgg ccaaccacac cagtatctcc
     1261 tcgctttttg aaagttcctg ccagcagtat gacaaactgt ggaagcgggg ggccttcctg
     1321 gagcagttcc gcaaagagga catcttcaag gacaactttg aggagatgga cagatccagg
     1381 gaggtggtgc aggagctcat cgatgagtat cacgctgcta ccaggccgga ctatatctcc
     1441 tggggcaccc aggagcagtg attgcatttt ctgctgttcc cctggacaag cccagccccc
     1501 accatgcctg gaccttctga cacaatgtcc cctcacattt ctgagttcat gtcccgtcta
     1561 ggagctgttc ctatctcttc cttctcattc ctggttcttc actgacttct ttggttctaa
     1621 taaagcaaga aggctcgatg ataaa
//
