LOCUS       NM_001025675            1776 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus tubulin, beta 6 class V (Tubb6), mRNA.
ACCESSION   NM_001025675 XM_225867
VERSION     NM_001025675.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1776)
  AUTHORS   de Mateo S, Castillo J, Estanyol JM, Ballesca JL and Oliva R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   2  (bases 1 to 1776)
  AUTHORS   Bharti P, Schliebs W, Schievelbusch T, Neuhaus A, David C, Kock K,
            Herrmann C, Meyer HE, Wiese S, Warscheid B, Theiss C and Erdmann R.
  TITLE     PEX14 is required for microtubule-based peroxisome motility in
            human cells
  JOURNAL   J Cell Sci 124 (Pt 10), 1759-1768 (2011)
   PUBMED   21525035
REFERENCE   3  (bases 1 to 1776)
  AUTHORS   Gonzales PA, Pisitkun T, Hoffert JD, Tchapyjnikov D, Star RA, Kleta
            R, Wang NS and Knepper MA.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC097977.1.
            
            On Jul 22, 2005 this sequence version replaced XM_225867.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC097977.1, EV771061.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1776
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18q12.1"
     gene            1..1776
                     /gene="Tubb6"
                     /gene_synonym="RGD1305887"
                     /note="tubulin, beta 6 class V"
                     /db_xref="GeneID:307351"
                     /db_xref="RGD:1305887"
     exon            1..88
                     /gene="Tubb6"
                     /gene_synonym="RGD1305887"
                     /inference="alignment:Splign:2.1.0"
     CDS             32..1375
                     /gene="Tubb6"
                     /gene_synonym="RGD1305887"
                     /codon_start=1
                     /product="tubulin beta-6 chain"
                     /protein_id="NP_001020846.1"
                     /db_xref="GeneID:307351"
                     /db_xref="RGD:1305887"
                     /translation="MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQL
                     ERISVYYNESSSKKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWA
                     KGHYTEGAELVDSVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP
                     DRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLT
                     TPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAR
                     GSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQ
                     NKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFRRK
                     AFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQDATVNDGEEAFEDEDEEEINE"
     exon            89..197
                     /gene="Tubb6"
                     /gene_synonym="RGD1305887"
                     /inference="alignment:Splign:2.1.0"
     exon            198..308
                     /gene="Tubb6"
                     /gene_synonym="RGD1305887"
                     /inference="alignment:Splign:2.1.0"
     exon            309..1751
                     /gene="Tubb6"
                     /gene_synonym="RGD1305887"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagccagcgc ccgagcgcaa acgcgcccgc catgagggag attgtgcaca tccaggcggg
       61 ccagtgtggg aaccagatcg gtaccaagtt ttgggaagtg atcagcgatg agcacggcat
      121 cgacccggcc ggaggctacg tgggcgactc ggcgctgcag ctggagagga tcagcgtcta
      181 ctacaatgag tcatcctcta agaagtacgt acccagggct gccctggtgg acttggagcc
      241 cggcaccatg gacagcgtga ggtctgggcc ttttgggcag ctcttccggc ctgacaactt
      301 catcttcgga cagacgggtg ccgggaacaa ctgggccaag ggccactaca cggagggcgc
      361 ggagctggtg gactcggtgc tggatgtggt gcgcaaggag tgtgagcact gcgactgcct
      421 gcagggcttc cagctcactc actcgctggg cggtggcacg ggctcgggca tgggcacgct
      481 gctcatcagc aagatccgag aggagtaccc agaccgcatc atgaacacct tcagcgtcat
      541 gccgtctccc aaggtctcag acaccgtggt ggaaccctac aatgccacac tgtcggtgca
      601 ccagctggtg gagaacaccg atgagaccta ctgcatcgac aatgaggccc tctacgacat
      661 ctgcttccgc acgctcaagc tgaccacacc cacttacggg gacctcaacc acttggtatc
      721 tgctaccatg agtggtgtca ccacatcact gcgtttccct ggccaactca atgccgacct
      781 gcgcaagctg gctgtgaaca tggtgccctt cccgcgcctg catttcttca tgcccggatt
      841 cgccccgctc acagcccggg gtagtcagca gtaccgtgcc ctgacagtgc ctgagctcac
      901 acagcagatg ttcgatgcca agaacatgat ggctgcctgt gacccacgcc atggccgcta
      961 cctgaccgtc gccactgtct tccggggccc catgtccatg aaggaggtgg acgagcagat
     1021 gctggccatc cagaacaaga acagcagcta ctttgtggag tggattccca acaacgtgaa
     1081 ggtagccgtg tgtgacatcc caccacgggg cctgaagatg gcctccacct tcataggcaa
     1141 tagcactgcc atccaggagc tattcaagcg catctcagag cagttctcag ccatgttccg
     1201 ccgcaaggcc ttcctgcact ggttcaccgg cgagggcatg gatgagatgg agttcaccga
     1261 ggccgagagc aacatgaatg acctggtgtc cgagtaccag cagtaccagg acgccacagt
     1321 caacgatggg gaagaggctt ttgaagatga ggatgaagaa gagatcaacg aataggggcc
     1381 gtaagatgct acagtgcata tctacttagc cctgatggtg tgccaatggt gccctggtct
     1441 gtcacaggcc cctctcaaac caaatgtacc acactgttcc ccaggttacc tggacagaga
     1501 actttatcag agaattggca gtcccagcag cccagggaga ctttatatag gaacactgca
     1561 agctaagtac ggggccatac agggctaaag aaagtgacca cccccggccc catcagagtt
     1621 agcgggggag ttagaataag gatttgtttt tcatccttgg tgataaaaac tgaagccaca
     1681 ccgtgctgcc ttaattgaat acataatatg gaacttgatg acaatccatt cataataaaa
     1741 tgctaaacct gaaaaaaaaa aaaaaaaaaa aaaaaa
//
