LOCUS       NM_001024336            1513 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus tubulin, alpha 3B (Tuba3b), mRNA.
ACCESSION   NM_001024336 XM_575720
VERSION     NM_001024336.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1513)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   2  (bases 1 to 1513)
  AUTHORS   Khodiyar,V.K., Maltais,L.J., Ruef,B.J., Sneddon,K.M., Smith,J.R.,
            Shimoyama,M., Cabral,F., Dumontet,C., Dutcher,S.K., Harvey,R.J.,
            Lafanechere,L., Murray,J.M., Nogales,E., Piquemal,D., Stanchi,F.,
            Povey,S. and Lovering,R.C.
  TITLE     A revised nomenclature for the human and rodent alpha-tubulin gene
            family
  JOURNAL   Genomics 90 (2), 285-289 (2007)
   PUBMED   17543498
  REMARK    Erratum:[Genomics. 2009 Apr;93(4):397. Ruef, Barbara J [added]]
REFERENCE   3  (bases 1 to 1513)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079242.1.
            
            On or before Apr 2, 2006 this sequence version replaced
            XM_575720.1, XM_575670.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079242.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q44"
     gene            1..1513
                     /gene="Tuba3b"
                     /gene_synonym="RGD1565155"
                     /note="tubulin, alpha 3B"
                     /db_xref="GeneID:500363"
                     /db_xref="RGD:1565155"
     exon            1..49
                     /gene="Tuba3b"
                     /gene_synonym="RGD1565155"
                     /inference="alignment:Splign:2.1.0"
     CDS             47..1399
                     /gene="Tuba3b"
                     /gene_synonym="RGD1565155"
                     /note="alpha-tubulin 3"
                     /codon_start=1
                     /product="tubulin alpha-3 chain"
                     /protein_id="NP_001019507.1"
                     /db_xref="GeneID:500363"
                     /db_xref="RGD:1565155"
                     /translation="MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGG
                     GDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANN
                     YARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVD
                     YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD
                     IERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVI
                     SAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIAT
                     IKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD
                     HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEAEAEEGEEY
                     "
     exon            50..272
                     /gene="Tuba3b"
                     /gene_synonym="RGD1565155"
                     /inference="alignment:Splign:2.1.0"
     exon            273..421
                     /gene="Tuba3b"
                     /gene_synonym="RGD1565155"
                     /inference="alignment:Splign:2.1.0"
     exon            422..1102
                     /gene="Tuba3b"
                     /gene_synonym="RGD1565155"
                     /inference="alignment:Splign:2.1.0"
     exon            1103..1490
                     /gene="Tuba3b"
                     /gene_synonym="RGD1565155"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggagcatcgc tgaggatcgg ctgaggtgct ctgctaggag ctcagcatgc gtgagtgcat
       61 ctctatccac gtggggcagg caggtgtcca gattggcaat gcctgctggg agctgtactg
      121 ccttgaacat ggtattcagc ccgatggtca aatgccaagt gacaaaacca ttggtggtgg
      181 ggacgactca ttcaacacgt tcttcagtga gactggcgcc ggcaagcatg tgcccagagc
      241 agtgtttgtg gatctggagc ccactgtggt tgatgaagtg cgcaccggaa cctaccggca
      301 gcttttccac ccagagcagc tgatcactgg gaaggaagat gcagccaaca attatgccag
      361 aggtcattat accattggca aggagattgt tgacctggtc ctggaccgga tccgaaaact
      421 ggctgatctg tgcacggggc tgcagggctt cctcatcttc cacagctttg gagggggcac
      481 agggtctggg ttcgcatctc tgctgatgga gcggctttcc gtggactacg gcaagaagtc
      541 caagctggag tttgccatct acccagcccc ccaggtctcc acggctgtcg tggagcccta
      601 caactccatc ctgaccacgc acacgacgct ggagcactct gactgtgctt tcatggtgga
      661 caatgaagcc atctacgaca tctgtcggcg aaacctggac attgaacgtc ccacttacac
      721 caacctcaat cgtctgattg ggcagattgt gtcgtccatc acagcttctc tgaggttcga
      781 cggggccctg aatgtggact taacagaatt ccagaccaac ctggtgccgt accctcgcat
      841 ccacttcccg ctggccacct atgccccggt catctcggcc gagaaggcct accatgagca
      901 gctgtcagtg gcagagatca ccaacgcttg ctttgagcca gccaatcaga tggtcaagtg
      961 tgaccctcgc catggcaaat acatggcctg ctgcatgttg tacagggggg atgtggttcc
     1021 aaaagatgtc aatgcggcta ttgctaccat caagaccaag cgtaccatcc agtttgtgga
     1081 ttggtgccca actggcttta aggtgggtat taactaccag cctcccaccg tggtccctgg
     1141 gggcgacctg gccaaggtgc agcgggccgt gtgcatgctg agcaacacca ctgccatcgc
     1201 agaggcctgg gcccgcctgg accacaaatt tgacctcatg tacgccaagc gggccttcgt
     1261 gcattggtac gtgggagagg gcatggagga aggggagttc tcagaggccc gggaggacct
     1321 ggcagctctg gagaaggatt atgaagaggt gggcgtggat tccgtggaag cagaggcaga
     1381 agaaggggag gaatactgag tacatggatc tggctggcag ccatccattt ccgccttccc
     1441 caccattgtc actaaaggct atgtttactt attaaagttt ttaaatggaa aaaaaaaaaa
     1501 aaaaaaaaaa aaa
//
