LOCUS       NM_001106537            4643 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus alpha tocopherol transfer protein like (Ttpal),
            mRNA.
ACCESSION   NM_001106537 XM_001069672 XM_230830
VERSION     NM_001106537.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4643)
  AUTHORS   Ghosh D, Lippert D, Krokhin O, Cortens JP and Wilkins JA.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474005.2.
            
            [WARNING] On May 7, 2024 this sequence was replaced by
            NM_001106537.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001069672.1, XM_230830.4.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132262,
                              SAMD00132263 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4643
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q42"
     gene            1..4643
                     /gene="Ttpal"
                     /gene_synonym="RGD1305754"
                     /note="alpha tocopherol transfer protein like"
                     /db_xref="GeneID:296349"
                     /db_xref="RGD:1305754"
     exon            1..70
                     /gene="Ttpal"
                     /gene_synonym="RGD1305754"
                     /inference="alignment:Splign:2.1.0"
     exon            71..533
                     /gene="Ttpal"
                     /gene_synonym="RGD1305754"
                     /inference="alignment:Splign:2.1.0"
     CDS             86..1117
                     /gene="Ttpal"
                     /gene_synonym="RGD1305754"
                     /note="tocopherol (alpha) transfer protein-like"
                     /codon_start=1
                     /product="alpha-tocopherol transfer protein-like"
                     /protein_id="NP_001100007.1"
                     /db_xref="GeneID:296349"
                     /db_xref="RGD:1305754"
                     /translation="MSEESDSVRTSPSVASLSENELPPPPPEPPGYVCSLTEDLVTKA
                     REELQEKPEWRLRDVQALRDMVRKEYPYLSTSLDDAFLLRFLRARKFDYDRALQLLVN
                     YHGCRRSWPEVFSNLRPSALKDVLNSGFLTVLPHTDPRGCHVLCIRPDRWIPSNYPIT
                     ENIRAIYLTLEKLIQSEETQVNGVVILADYKGVSLSKASHFGPFIARKVIGILQDGFP
                     IRIKAVHIVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLSSLHTSLPRNILPKEYG
                     GTAGELDTASWNAVLLASEDDFVKEFCQPESGCDGLLGQPLLPEGLISDAQCDDSMRA
                     MKSQLYSCY"
     exon            534..727
                     /gene="Ttpal"
                     /gene_synonym="RGD1305754"
                     /inference="alignment:Splign:2.1.0"
     exon            728..838
                     /gene="Ttpal"
                     /gene_synonym="RGD1305754"
                     /inference="alignment:Splign:2.1.0"
     exon            839..4643
                     /gene="Ttpal"
                     /gene_synonym="RGD1305754"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtctgttctg cgcgctctgc cagccgaggc tcctgccgct gtgacccgcg ctccgcccgc
       61 cgccgggccg ggaccctgat agctaatgtc agaagaaagt gactctgtga gaaccagccc
      121 ctctgtggcc tcactctccg aaaatgagct gccaccgcct cccccggaac ctcccggcta
      181 cgtgtgctcg ctgacagaag acttggtcac caaggccagg gaagagcttc aggagaagcc
      241 cgagtggaga ctccgggatg tgcaggccct tcgagacatg gtacggaagg agtacccata
      301 cctgagtaca tcgctggatg atgccttcct gttgcgcttt ctgagggccc gaaagtttga
      361 ttatgaccgg gccctgcagc tgctggtcaa ctaccatggc tgcaggcgga gctggccaga
      421 ggtcttcagc aacctgaggc catcagccct gaaagacgtt cttaactctg gattcctcac
      481 agtgctgccc cacacagacc ccaggggctg ccatgtcctc tgcatccgac cagacagatg
      541 gataccgagc aactacccga tcaccgagaa catccgcgcc atctacttga cgttagaaaa
      601 actcattcag tccgaggaga cccaggtgaa cggggttgta atcctcgccg actacaaggg
      661 agtgagctta tcaaaggcgt ctcactttgg cccctttatc gccagaaagg tgattggcat
      721 ccttcaggat ggcttcccca ttcggataaa agcagttcac atagtaaacg aacctcggat
      781 atttaagggc attttcgcca tcataaaacc atttctgaag gagaaaattg caaacaggtt
      841 cttcctccat gggtctgacc tgagctctct gcacacgagc cttccaagga atatcctccc
      901 caaagagtat gggggcaccg ctggggagct ggacactgcc agctggaacg cggtgctgct
      961 ggcctcggag gatgattttg tgaaagagtt ctgccagcct gagtctggct gcgatggtct
     1021 cttgggccag cccctgctgc ctgaggggct gatctcagac gcgcagtgtg acgactccat
     1081 gcgagccatg aagtcccagc tctactcctg ctattagccc tcttccggga gaatcaccat
     1141 gtgtaattcc ttccttcttc gaatgcacag gctgaagatg ccaggacctc ggtcttgctc
     1201 catcacagtg cagcacggag ctgcctgcag agatttaagg agagcccatc acaggcagac
     1261 ctctgaccag ctaggttatt ccaagaagac atggaaattg ccctggtgat tcccagatgt
     1321 ctgtactcta agtctgcaac tgttactctg gaagctgcat ctgtttctta tgcatcttgg
     1381 aaagaactag ggtcaaagtc actctgaagt gaccaggagt agacaacttg attgatcatg
     1441 agtctgaaac aattgccaat cctgaaaggt ggccatgcgt gagactttga gtctctttcc
     1501 cataaactgt aggtgttgac tactgctgct tatctgcaaa ggtcagggtt caggccccag
     1561 ttggcattgc tgggtctggg aagcactgct aactgagtgg tagaaacgcc aggcccaggc
     1621 agcacttaaa ggttaaaggt caaatttgga agctaaggct ataaatcatc ctgggttcca
     1681 ggcttaaatc ttgcaatgga cactctcccc aaacccataa agccttagct ctggttctcc
     1741 atggaatcat gcaggtcaac ataaaatact ggattcttgg actgcgtggc taaaagcact
     1801 tagactagga gtccagtgtg tgactggatg gataggggcc tcagcttgtc aactctaagt
     1861 taggctccat ggaatgaagg ccttgggggc tgctcaagtt ctgttaggtt tctgcttgga
     1921 aagatgacca cctggaggtg gccgggcctt tttggtttgg cttggttttg tgttatagac
     1981 acaagcctta tggaaaggaa ccgtctggcc tttaaagaaa ttactatgtt cctgggagtt
     2041 ggtggtaacc agctgctttt gcagaatgat gggtgaactg gaaagggatg gcttttgtga
     2101 ggctgaccaa gtcttgtacg cggatgttgt acagattcct cccacaccgg agacattcgt
     2161 actatattag aaacagccac ggacttgtgc tctttcagtt tgtgtccctg gaaacatacg
     2221 gggggcaggc tgttgctggt tcacctgggg gccctgccct cccagacacg ggagtgcttg
     2281 tctagcgtgg gagggccagt tggccagatt gttagctctg cgttggggtg tcgtagacaa
     2341 ctgacaggat tttagcctta acccaagcac tgagtgaggt gatttttccc ttggcttttg
     2401 gcgtgtcctt tggtattcac catgtattgt ggtgtcaggt agtgtcaggt actgttggct
     2461 gtgtgtctcc tagactaagc gggcgttgca tacagcttac atacagtgct tggagaccaa
     2521 aggtcagttg gttgttaata agctgttcca cccttaacag cacttcccaa aacatcacag
     2581 aagctcttta tggacactta cctcaataat gccaattctg gaggacactc ttttcaccat
     2641 agatgcgaat ccttgatctc ctggctcctg gttgagcttc cgcactgata caccctcttg
     2701 actgcccatc agggccattt gctgctgagt ttctgctatt tgctttagct cctggtgttt
     2761 tctgcctaaa gggatggcca cccagacacc taaaaagacc cgggatggct ctctagcctt
     2821 ggtggagagt cttattagaa gttttctttg ggggattggg gatttggctc agtggtagag
     2881 cgcttgcctg gcaagcacaa ggccctgggt tcggtcccca gctcttaaaa aaaaaaaaag
     2941 ttttctttgg tagttgggga aaaggcagaa ggaaaaaaac aaagggaaag atgaatctct
     3001 cagtcctacc tggttcccta aatttaaatc gtgtcatgtg actagttagt ctctttgact
     3061 taacaaaggg acaaccaggt tcttggggag aaatctcaga gcagaaatgt tgcctgtttg
     3121 ctaagccttt ctggttaagc caagagggag ccattgtatc aagactctaa ggaggctgga
     3181 tctgttatgt ccccattgct acttgtggac tctagaggac tcttggcacc tcaggtttga
     3241 agcaggctgt gagaccagga tgtcctggtg ccaagcaacc ccactgttga gcagcagggg
     3301 caccataggc ctcagctagg ggagcgcact ggtagagcca gcaagtgagc aggaatctga
     3361 ctttagggta aaaatctaga cagttctgac agctggaagt caacttttcc tccattcaaa
     3421 gtcatgtggc attgggaagg ggctagggaa atagaagtgg gttccagctt tatcttccta
     3481 cacagtctcg agtatagcat taacaccgag tgctggacag aggttgtctg ctgaacactc
     3541 aatcctgctc ctgactgact ctggaaataa ggacattcca ctctgcttgg cgcggagatg
     3601 ccctagtgta agaatatggg agtcttctct ttctcaagtc ctctacagac ttccaggcag
     3661 ttcatcttcc tagaaaagta tgagttctgc cttcatgtag aaacacagat aaaatctaca
     3721 gaaacaaccg gaagtgctgg cttcttacgc cttggctttc tccaggcaca ggtgggttcg
     3781 actactccca tttcatcttt gtaagcacct caggttatag ggcagtttct tcagagttgg
     3841 gggactggag ccattccccc tgaatgcctg aggtggcctt accacctagc agccagtttg
     3901 gccagcaaca gccacactgc tgttatggta tcataatacc tcatcctcgg gtttccttca
     3961 gaaaggaaaa tgctaactca gttgatgtaa gtgttgctgt gctgggatcc tgtcatgtgg
     4021 gagggaacac caaatacaca ggctctcagg agacatcttg ctaaggcttc tctttactgc
     4081 agtctgctca cgttgtaaat ctgccctctg ttctcctgac tcagaaagac tcagccacaa
     4141 atgcaagaag cgccatcaaa cgttccttct cagtgggaac gtgctccaca ggaaggtcca
     4201 gtgggatttg cagctagagt cacgttttac tggtttgtga ccaaatttac tggttttcag
     4261 ttacctgggg tcctatgtgt gttttcaacc ttttcccatc aggcagttag tagtagccac
     4321 tttgggttcc tgtggacgtg cctcagcttc tcggcatagg aacccaacag gtagaatact
     4381 tgaaacttct cagtggccaa gacctcgata ccctctctga tgggtgggaa ctgggctatt
     4441 ttcctgacca atctaggcca ccattttagt ccctggtcac attccttact ccaaactgaa
     4501 attcagtttg gctttgagta tgtgcacacg tggtgggttc acctacttca gtgttgacca
     4561 aaagtttatt tttctagtgc atttttctaa atggtaaaaa tatgtaattt tagtatgcat
     4621 gactgggtct ccaaaataaa aac
//
