LOCUS       NM_001014051            1771 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus tubulin tyrosine ligase like 9 (Ttll9), mRNA.
ACCESSION   NM_001014051 XM_230741
VERSION     NM_001014051.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1771)
  AUTHORS   Konno,A., Ikegami,K., Konishi,Y., Yang,H.J., Abe,M., Yamazaki,M.,
            Sakimura,K., Yao,I., Shiba,K., Inaba,K. and Setou,M.
  TITLE     Ttll9-/- mice sperm flagella show shortening of doublet 7,
            reduction of doublet 5 polyglutamylation and a stall in beating
  JOURNAL   J Cell Sci 129 (14), 2757-2766 (2016)
   PUBMED   27257088
REFERENCE   2  (bases 1 to 1771)
  AUTHORS   van Dijk,J., Rogowski,K., Miro,J., Lacroix,B., Edde,B. and Janke,C.
  TITLE     A targeted multienzyme mechanism for selective microtubule
            polyglutamylation
  JOURNAL   Mol Cell 26 (3), 437-448 (2007)
   PUBMED   17499049
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC082105.1.
            
            On Apr 20, 2005 this sequence version replaced XM_230741.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC082105.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1771
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q41"
     gene            1..1771
                     /gene="Ttll9"
                     /note="tubulin tyrosine ligase like 9"
                     /db_xref="GeneID:311548"
                     /db_xref="RGD:1359622"
     exon            1..46
                     /gene="Ttll9"
                     /inference="alignment:Splign:2.1.0"
     CDS             32..1417
                     /gene="Ttll9"
                     /note="tubulin--tyrosine ligase-like protein 9; tubulin
                     tyrosine ligase-like family, member 9"
                     /codon_start=1
                     /product="probable tubulin polyglutamylase TTLL9"
                     /protein_id="NP_001014073.1"
                     /db_xref="GeneID:311548"
                     /db_xref="RGD:1359622"
                     /translation="MSRQKSQTSKGHGASKGKEREQRTLIRFKTTLMNTLMDVLRHRP
                     GWVEVKDEGEWDFYWCDVSWLRENFDHTYMDEHVRISHFRNHYELTRKNYMVKNLKRF
                     RKQLEREAGKTEAAKCDFFPKTFEMPCEYHLFVEEFRKNPGITWIMKPVARSQGKGIF
                     LFRRLKDIMDWRKGTAGKKVTSVETQATRANVNPSGSHDTRSSDDQKDDIPVENYVAQ
                     RYVENPYLIGGRKFDLRVYVLVMSYIPLRAWLYRDGFARFSNTRFTLNSIDDHYVHLT
                     NVAVQKTSPDYHPKKGCKWTLQRFRQYLASKHGPKAVETLFSDMDNIFIKSLQSVQKV
                     IISDKHCFELYGYDILIDQDLKPWLLEVNASPSLTASSQEDYELKTCLLEDTLHVVDM
                     EARLTGKEKRVGGFDLMWNDGPVSREEGPCDLSGMGNFVTNTHLGCINDRKEQLRQLF
                     RSLQVQKKASS"
     exon            47..90
                     /gene="Ttll9"
                     /inference="alignment:Splign:2.1.0"
     exon            91..183
                     /gene="Ttll9"
                     /inference="alignment:Splign:2.1.0"
     exon            184..295
                     /gene="Ttll9"
                     /inference="alignment:Splign:2.1.0"
     exon            296..481
                     /gene="Ttll9"
                     /inference="alignment:Splign:2.1.0"
     exon            482..550
                     /gene="Ttll9"
                     /inference="alignment:Splign:2.1.0"
     exon            551..625
                     /gene="Ttll9"
                     /inference="alignment:Splign:2.1.0"
     exon            626..716
                     /gene="Ttll9"
                     /inference="alignment:Splign:2.1.0"
     exon            717..757
                     /gene="Ttll9"
                     /inference="alignment:Splign:2.1.0"
     exon            758..845
                     /gene="Ttll9"
                     /inference="alignment:Splign:2.1.0"
     exon            846..904
                     /gene="Ttll9"
                     /inference="alignment:Splign:2.1.0"
     exon            905..1101
                     /gene="Ttll9"
                     /inference="alignment:Splign:2.1.0"
     exon            1102..1215
                     /gene="Ttll9"
                     /inference="alignment:Splign:2.1.0"
     exon            1216..1340
                     /gene="Ttll9"
                     /inference="alignment:Splign:2.1.0"
     exon            1341..1747
                     /gene="Ttll9"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgcccgtggc ggtttggttt gggcccgagt catgtcgcga cagaagagtc aaacttccaa
       61 gggccacgga gcgtcaaaag gaaaagagag agagcagaga acattaatcc gattcaagac
      121 cacgcttatg aacacgctca tggacgtact gcgccacagg cccggatggg tagaagtaaa
      181 agatgaaggt gaatgggatt tctattggtg tgacgtcagc tggctgcgtg agaactttga
      241 ccacacctac atggatgaac acgtgcgaat cagccacttt aggaaccact atgagctcac
      301 caggaaaaac tacatggtca agaacctaaa gcgattccgg aagcagctgg agcgggaggc
      361 aggaaagacg gaggcagcca agtgtgactt cttccccaaa acctttgaga tgccctgcga
      421 gtatcatctg tttgtggagg agttccgtaa gaaccccggc atcacctgga tcatgaaacc
      481 tgtcgcccga tctcagggga agggcatatt tctcttccgg agactgaaag acatcatgga
      541 ctggaggaag ggcactgcgg ggaagaaagt caccagtgtg gagacccagg ctactcgagc
      601 caatgtgaac ccttcaggca gccatgacac aaggagctct gatgaccaga aagatgatat
      661 cccagtggag aactatgtgg ctcagcgtta tgtggaaaac ccctacttga taggaggccg
      721 caagtttgac ctgcgtgtct acgtgctagt gatgtcgtac atccctctgc gggcgtggct
      781 gtaccgtgat ggcttcgccc gcttctccaa caccagattc acattgaata gcatcgacga
      841 ccactatgtt cacctcacca atgttgctgt gcagaagaca tcacctgact accacccaaa
      901 aaagggctgc aagtggactc ttcagcgatt caggcagtac ctggcctcca agcatggtcc
      961 caaggcggtg gagacactct tcagtgacat ggacaacatc ttcatcaaga gcctgcagag
     1021 tgtgcagaag gtgatcatca gtgataagca ctgctttgag ctgtacggct atgacatcct
     1081 cattgaccag gacctcaagc cgtggctcct agaagtcaat gcatctcctt cactgacagc
     1141 cagcagccag gaagactatg aactcaagac ctgtctgctg gaagataccc tgcatgtggt
     1201 ggacatggag gccaggctca caggaaagga aaagagagtc gggggctttg acctcatgtg
     1261 gaatgatggc cctgtcagca gagaggaggg gccttgtgac ctatcgggga tgggaaactt
     1321 tgtaaccaac actcacttag gctgcatcaa cgatcggaag gagcagttga ggcagctgtt
     1381 ccgatccctt caagtgcaga agaaagcctc tagctgaccc ccagccggaa gaaatgaggc
     1441 cctggcaggt gccgccctgg cctctagcag cgggatccca gcacagtgca ccagtcttca
     1501 ccttcctcca gcatggcagc tgttttactg gagaggcagc ctcagcttgc taattggacc
     1561 aaacggaccc tggacacccc tcacccccct ccagccctgt gcatctttga accaggaaca
     1621 gccaatcttt cgaactggat gggctcatcc ttggcccaaa gaagccaagc agcaagttcc
     1681 accattcaga gagcatgtct aataaagaac aggcttagag ccacttagcg ctgggccagg
     1741 ctcgggaaaa aaaaaaaaaa aaaaaaaaaa a
//
