LOCUS       XM_017591994            3940 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus TELO2 interacting protein 1 (Tti1),
            transcript variant X2, mRNA.
ACCESSION   XM_017591994
VERSION     XM_017591994.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017591994.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017591994.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3940
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3940
                     /gene="Tti1"
                     /gene_synonym="RGD1562582"
                     /note="TELO2 interacting protein 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 14 ESTs, 1 long SRA read, 1 Protein, and 99%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 54 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:499935"
                     /db_xref="RGD:1562582"
     CDS             179..3445
                     /gene="Tti1"
                     /gene_synonym="RGD1562582"
                     /codon_start=1
                     /product="TELO2-interacting protein 1 homolog isoform X1"
                     /protein_id="XP_017447483.1"
                     /db_xref="GeneID:499935"
                     /db_xref="RGD:1562582"
                     /translation="MAVFDTPEEAFGVLRPVCVQLTKTQTVENVEHLQTQLQAISDTA
                     LQELQQYILFPLRFALKTPGPKRERLVQSVVECLTFVLSSTCVREQELLQELFSELSA
                     CLYSPNSQKPAALSEELKLAVIQGLSTLMHSAYRDIILTFYEPSILPRLGFAVSLLLG
                     LAEQEKSKQIKIAALQCLQVLLLQCDCQDHPRPLDELEQQQLGDLLASFLPGISTALT
                     RVITGDFKQGHSIVVSSLKVFYKTVGFIMADEQLTRIPKVRAKPAVEHKVAALMIHRE
                     ADWVKSTGGKLAILIKKIIDCVSVHPHWKVRLELVEFVEVLLFKCSQSLVESTGPLLK
                     VLVGLVNDESSEVQAQCNTVLRRLADQKVVVGSRALADILSESLHSLATSLPRLMNTQ
                     DDQGKFSTLSLLLGYLKLLGPKVHVILNSVAHVQRLSRALIQVLELEVADVKMVEERR
                     WNSDNLSASAEASAARPWSRVQRRYFRCFTDERVFLLLRKICQLLGYYGDLYLLVDHF
                     MELYHTSIVYRKQAAMILNELVVGAAGLDVEDIHYECASTSPEELREIVKSILEEYTS
                     QENWYLITCIEAEEEEEVMMKQQGLQAVTSGVHTCQVVSFPALSKPSPTICSMNSNIW
                     QICIQLEGIGQFAYALGKDFRLLLMSALYPVLEKAGDQTLLISQVAASTMVDICHACG
                     YNSVQHLINQNSDYLVNGISLNLRHLALHPHTPKVLEVMLRNSDASLLPLVADVVQDV
                     LATLDQFYDKRAASFVSVLHALLAALAHWFPDSGSTGQLQQHSLEEVARQTPAASKAS
                     PTAEDIERFVLSYLQEKDMAEGNVSDLEAEEVLSEEQSVPPRVDESDALPDVEPPLPV
                     HIQIAKDVMERCIHLLSDKNLKVRLKVLDVLGLCVEVLQTHKNQLLPLAHRAWPSLVH
                     RLTSDDPLAVLRAFKVLQTLGSRCGDFLRSRFCKDVLPKLASSLVTQAPISARAGPVY
                     SHTLAFKLQLAVLQGLGPLCESLDLGEGDLNKVADACLIYLSTKQPVKLQEAARSVFL
                     HLIKVDPDSTWLLLHQLHCPVQQFTAPHPSLHPVQWQGATKPQNPYATNVCHLLLQLQ
                     "
ORIGIN      
        1 cgtctagggt gctggaggcg ggagagtggg ggaaagactg gaagacgagt ttcagagagt
       61 ggtgttgaca agacctcgct ctgaagtcac atgtggaaga agccaggagg aagtacgctg
      121 tgaatttatt cagggacgcc tgcagaatgt ttcctcagta ggggaaagag gttgtacaat
      181 ggcagtgttt gacactcccg aggaggcttt tggtgtctta cgtccagtct gcgttcagct
      241 cacaaagacc cagacagtgg agaacgtgga acatctgcag acacagttac aagccataag
      301 tgacactgcc cttcaggaac tacagcagta cattctcttc cccttgcgat ttgccctgaa
      361 gaccccaggg cccaaaagag agcgtctcgt acagagtgtg gtggaatgcc tcacctttgt
      421 cctctcttca acatgtgtga gagagcagga gcttctccag gaactcttct cagaactttc
      481 agcttgtctg tactctccca actcccagaa acccgcagct ttgtcagagg agttaaaatt
      541 ggctgtgatc cagggactta gcaccttaat gcactcagct tacagggaca tcattctgac
      601 tttttatgag ccctccattc tgcctcgttt aggatttgct gtgtctttac tgttgggcct
      661 ggcagagcag gagaagtcaa aacagattaa aattgctgcc ttacagtgtc tacaggttct
      721 cctccttcaa tgtgattgtc aggaccatcc aaggcctttg gatgaactgg agcagcaaca
      781 gctgggggac ttgttggcat ctttcttacc tggaatctca actgcactga ccagagtcat
      841 cacaggagac tttaaacaag gtcatagcat tgtcgtgtct tccctaaagg tcttctacaa
      901 aaccgtgggc ttcatcatgg ctgatgaaca gctcacaagg atcccaaagg tgcgagcaaa
      961 gcccgcagtt gagcacaaag tagcagccct gatgattcac agagaagcag actgggtaaa
     1021 aagtactggt ggcaagttgg caatccttat taaaaagata attgactgtg tctctgttca
     1081 tccacactgg aaggtgaggc tggaactggt agagtttgtg gaggtcctgc tttttaagtg
     1141 cagtcagtcc ctggttgaat ccacaggtcc cctcttgaag gtgttagttg gcctggtgaa
     1201 tgatgaaagt tctgaagtgc aggcccagtg caatacagtg ctaaggcgtc ttgcagatca
     1261 gaaggtagta gtgggcagca gagccttggc tgatatcttg tcagaaagcc tgcattcatt
     1321 ggccacatct cttccccgcc tgatgaacac acaagatgat cagggcaagt tctctaccct
     1381 ttccctgtta cttgggtatc tgaaactgtt gggccccaaa gtacatgtaa ttctcaattc
     1441 tgtggcccat gtgcagcgcc tttccagggc actcatccaa gtattggagc tagaggtggc
     1501 tgatgtcaaa atggtggaag agcggcgatg gaattctgac aacctcagtg cttctgcaga
     1561 ggcctcagct gcacggccat ggagcagagt ccagaggcga tatttccgat gctttactga
     1621 cgagagggtc ttcctgctcc ttcgaaagat ctgtcagctt ctgggttatt atggggacct
     1681 gtatttgctt gtggatcact ttatggaact gtatcataca tctatagttt atcggaagca
     1741 agctgccatg atccttaatg aactggttgt aggggctgct ggactggatg tggaagatat
     1801 tcattatgaa tgtgcaagca cgagcccaga ggaattgaga gagattgtga aatctatact
     1861 agaggaatac acgagccaag aaaactggta cttgattacc tgtattgaag ctgaggagga
     1921 ggaggaggtg atgatgaagc agcaaggcct ccaggctgtc acatctggtg tccacacctg
     1981 ccaagttgta tcctttccag ccctgtcaaa gccgagtccc actatctgct ccatgaacag
     2041 taacatctgg cagatatgca ttcagttgga agggattggc cagtttgctt atgcactagg
     2101 aaaagacttt cgtttgcttt tgatgtcagc tctctatcca gtactagaga aggctggaga
     2161 ccaaaccttg ctcattagtc aagtggctgc tagcaccatg gtagatattt gccatgcttg
     2221 tggctataac tctgtacagc acctgatcaa tcaaaattca gactatttgg tgaatggaat
     2281 ctctttaaat ctgcgtcacc ttgctctaca cccacatacc ccaaaagtcc tggaagtcat
     2341 gcttcggaac tcagatgcta gcctccttcc tttggtagca gatgtggttc aagatgtctt
     2401 ggccaccctg gaccaatttt atgataagag agctgcatcc tttgtcagcg ttctgcacgc
     2461 tctactggca gcattggcac attggttccc agactcgggt tctactgggc aactccaaca
     2521 gcacagttta gaagaagtgg cgaggcaaac gccagcagct agcaaggcta gccccacagc
     2581 tgaggacatc gagcggtttg tgctgagcta tctccaggag aaggatatgg cagaggggaa
     2641 tgtttctgat cttgaagctg aagaagttct ttcagaggag cagtctgtcc ctcccagagt
     2701 ggatgagagt gacgcccttc cagacgtgga gccaccactg ccagtgcaca tccagatagc
     2761 caaggacgtg atggagcgct gtatccacct gttatcagat aaaaacctga aagtccgcct
     2821 gaaggtcttg gacgtgctgg gattgtgtgt ggaagttcta cagacccaca agaaccagct
     2881 tcttcccctg gctcaccgag cctggccttc actcgtgcac cgactcacaa gtgatgaccc
     2941 cctggcagtg ctcagagctt tcaaggtttt gcagaccctt ggaagcagat gtggcgattt
     3001 tctccggagc cggttctgca aagatgtcct gccaaaattg gccagctcct tagtcaccca
     3061 ggcccccatc agtgccaggg ctggaccagt ttattctcac acactggcct tcaagctaca
     3121 gctggctgtc ctgcagggcc tgggccccct ctgtgaaagt ctggacttag gtgagggtga
     3181 cctgaataaa gtggctgatg cctgcttgat ttacctcagc accaaacagc ccgtgaaatt
     3241 acaagaggct gccaggagcg tcttcctcca cctgataaag gtggaccccg actccacctg
     3301 gctcctcctg caccagctgc actgccctgt gcagcagttc acagccccgc acccgagcct
     3361 tcacccagtg cagtggcagg gggccactaa gccacagaac ccctatgcca ccaatgtttg
     3421 ccacctgctt cttcaactgc agtgatcctg ccagaacctg ccagctagga gctgagctga
     3481 gccacccctg ctggatacag ttgcggcaac acagagagcg gtgaaggtgg attagacaac
     3541 caccaatata taaattgatc gatcacacaa ctgcttagaa attgggttga aggaaaagtc
     3601 gcttactgtt acttatgttt cactctttgt gttttcagat gacattgatt ggtggctcta
     3661 agagttcaac tctttagcct actgtctgca cagcccctct gccacacaag tccttcaaac
     3721 acacacaaac acacacacac acacacacac acacacacac cccttgtgct ctaagtccaa
     3781 gttcgattct cagcacccat tagtagctct caaccgtcca tgactccagt ttcaagggat
     3841 ccaaccccct cctctgacct caagcaccag acttgcacat ggtgcacaga cactcatgag
     3901 ccaaacacat ataagataaa taaatctttt caaaaatgtc
//
