LOCUS       NM_001100756            4507 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus tetratricopeptide repeat domain 7A (Ttc7a), mRNA.
ACCESSION   NM_001100756 XM_001058396 XM_343013
VERSION     NM_001100756.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4507)
  AUTHORS   Nakatsu F, Baskin JM, Chung J, Tanner LB, Shui G, Lee SY,
            Pirruccello M, Hao M, Ingolia NT, Wenk MR and De Camilli P.
  TITLE     PtdIns4P synthesis by PI4KIIIalpha at the plasma membrane and its
            impact on plasma membrane identity
  JOURNAL   J Cell Biol 199 (6), 1003-1016 (2012)
   PUBMED   23229899
REFERENCE   2  (bases 1 to 4507)
  AUTHORS   White RA, McNulty SG, Roman S, Garg U, Wirtz E, Kohlbrecher D,
            Nsumu NN, Pinson D, Gaedigk R, Blackmore K, Copple A, Rasul S,
            Watanabe M and Shimizu K.
  TITLE     Chromosomal localization, hematologic characterization, and iron
            metabolism of the hereditary erythroblastic anemia (hea) mutant
            mouse
  JOURNAL   Blood 104 (5), 1511-1518 (2004)
   PUBMED   15155459
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC168226.1.
            
            On or before Sep 14, 2008 this sequence version replaced
            XM_343013.3, XM_001058396.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168226.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4507
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q12"
     gene            1..4507
                     /gene="Ttc7a"
                     /gene_synonym="Ttc7"
                     /note="tetratricopeptide repeat domain 7A"
                     /db_xref="GeneID:362696"
                     /db_xref="RGD:1306211"
     exon            1..436
                     /gene="Ttc7a"
                     /gene_synonym="Ttc7"
                     /inference="alignment:Splign:2.1.0"
     CDS             250..2826
                     /gene="Ttc7a"
                     /gene_synonym="Ttc7"
                     /note="tetratricopeptide repeat domain 7"
                     /codon_start=1
                     /product="tetratricopeptide repeat protein 7A"
                     /protein_id="NP_001094226.1"
                     /db_xref="GeneID:362696"
                     /db_xref="RGD:1306211"
                     /translation="MAAKGAHGTHLKVESEMERCRAEGQWDRMFQLVRHLQVLGISGG
                     GSSNRRSSPSGRFISLDTDDFGKLLLAEALLEQCLKDNHDKIKNSIPLLEKTDSRLNE
                     ARDHLSSILNNGKLPPQYMCEAMLILGKLHYVEGSYRDAVSMYARAGIDDISVEDKPL
                     YQMRLLSEAFVIKGLSLERLPNSVASHIRLTEREEEVVACFERASWVAQVFLQELEKT
                     SNNSTSRHLKGSLSVDYELSYFLEAALQSAYVKNLKKGNIVKGMRELREILRTVETKA
                     TQNFKVVAAKHLAGVLLHSLSEDCYWSPLSHPLPEFMSKEENSFITQTLRKPHLYEGD
                     NLYCPKDNIEEALLLLLISESMATRDVVLSRAPEQEEDRKVSLQNASAIYDLLSITLG
                     RRGQYVMLSECLERAMKYAFGEFHLWYQVALSMVACGKSAYAVSLLRECMKLQPSNPT
                     VPLMAAKVCIGSLHWLEEAEHFAMVVIGLGEEAGEFLPKGYLALGLTYSLQATDATLK
                     SKQDELHRKALQTLERALELAPDDPQIIFYVSLQLALVRQISSAIERLQEALTVCRDD
                     ANALHLLALLFSAQKHHQHALDVINMAITEHPENFNLMFTKVKLEQVLKGPEEALVTC
                     RQMLRLWQALYNFSQLGGLEKDGSFEGLTVKKQNGIHLTLPDAHDADSGSRRASSIAA
                     SRLEEAMSELTITTSVLKQGPMQLWTTLEQIWLQAAELFMEQRQLKEAGFCIQEAAGL
                     FPTSHSVLYMRGRLAEVKGSFEEAKQLYKEALTVNPDGVCIMHSLGLILSRLGHKSLA
                     QKVLRDAVERQSTHHEAWQGLGEVLQDQGHNEAAADCFLTALELEASSPVLPFSIIAR
                     EL"
     exon            437..600
                     /gene="Ttc7a"
                     /gene_synonym="Ttc7"
                     /inference="alignment:Splign:2.1.0"
     exon            601..769
                     /gene="Ttc7a"
                     /gene_synonym="Ttc7"
                     /inference="alignment:Splign:2.1.0"
     exon            770..900
                     /gene="Ttc7a"
                     /gene_synonym="Ttc7"
                     /inference="alignment:Splign:2.1.0"
     exon            901..1016
                     /gene="Ttc7a"
                     /gene_synonym="Ttc7"
                     /inference="alignment:Splign:2.1.0"
     exon            1017..1095
                     /gene="Ttc7a"
                     /gene_synonym="Ttc7"
                     /inference="alignment:Splign:2.1.0"
     exon            1096..1253
                     /gene="Ttc7a"
                     /gene_synonym="Ttc7"
                     /inference="alignment:Splign:2.1.0"
     exon            1254..1317
                     /gene="Ttc7a"
                     /gene_synonym="Ttc7"
                     /inference="alignment:Splign:2.1.0"
     exon            1318..1455
                     /gene="Ttc7a"
                     /gene_synonym="Ttc7"
                     /inference="alignment:Splign:2.1.0"
     exon            1456..1539
                     /gene="Ttc7a"
                     /gene_synonym="Ttc7"
                     /inference="alignment:Splign:2.1.0"
     exon            1540..1644
                     /gene="Ttc7a"
                     /gene_synonym="Ttc7"
                     /inference="alignment:Splign:2.1.0"
     exon            1645..1762
                     /gene="Ttc7a"
                     /gene_synonym="Ttc7"
                     /inference="alignment:Splign:2.1.0"
     exon            1763..1820
                     /gene="Ttc7a"
                     /gene_synonym="Ttc7"
                     /inference="alignment:Splign:2.1.0"
     exon            1821..1893
                     /gene="Ttc7a"
                     /gene_synonym="Ttc7"
                     /inference="alignment:Splign:2.1.0"
     exon            1894..2054
                     /gene="Ttc7a"
                     /gene_synonym="Ttc7"
                     /inference="alignment:Splign:2.1.0"
     exon            2055..2171
                     /gene="Ttc7a"
                     /gene_synonym="Ttc7"
                     /inference="alignment:Splign:2.1.0"
     exon            2172..2266
                     /gene="Ttc7a"
                     /gene_synonym="Ttc7"
                     /inference="alignment:Splign:2.1.0"
     exon            2267..2401
                     /gene="Ttc7a"
                     /gene_synonym="Ttc7"
                     /inference="alignment:Splign:2.1.0"
     exon            2402..2604
                     /gene="Ttc7a"
                     /gene_synonym="Ttc7"
                     /inference="alignment:Splign:2.1.0"
     exon            2605..4482
                     /gene="Ttc7a"
                     /gene_synonym="Ttc7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcttctggac ggcttggggt cgcgcagccg cagccccagt ccagaggctc caggcggtgc
       61 cctgggcgct gccgccgctg ctgctgctgc gggtctccag ccgctacccg ggccccctct
      121 gccacccggg ccccggatgc cgtctgcact ccggtcgagc ctgctggaga gtgcgcccca
      181 gcctggacgc cgcccccggc ctggtctcca ctcctctgcc gcacctccca tgacagcacc
      241 cgctcgaaga tggctgcgaa gggcgcgcac ggcacccacc tgaaggtgga gagcgagatg
      301 gagcgctgcc gcgctgaggg ccagtgggac cgcatgttcc agctggtccg gcatctgcag
      361 gtgctgggca tttccggcgg cggcagtagc aaccggcgaa gcagcccgag cggcaggttc
      421 atctctctgg acaccgatga ctttgggaaa ttgctgctag cagaggccct tctggagcag
      481 tgtttgaagg ataaccacga caaaataaaa aactccatcc ctttgctgga gaagacggat
      541 tccaggctga acgaagccag ggaccacctg agcagcatcc ttaacaatgg gaagctaccg
      601 ccacagtaca tgtgtgaggc catgctgatc ttgggtaagc tgcattatgt ggagggctca
      661 taccgggatg ctgtcagcat gtacgcccgg gctgggatcg atgacatctc cgtggaggac
      721 aagcccttgt atcagatgcg gttgctgtcg gaggcttttg tcatcaaagg cctctccctg
      781 gaacgcctgc ccaactccgt cgcctcccat atccgcctga ctgagcggga ggaggaagtg
      841 gttgcctgtt ttgagagggc ctcgtgggtg gctcaggtgt tcctgcagga gctggagaag
      901 acctcaaaca acagcacatc aagacacctg aaaggcagct tgtcggttga ctatgaattg
      961 tcctacttct tggaagctgc cctccagagc gcgtacgtga agaacctgaa gaaggggaac
     1021 atcgtgaaag gcatgagaga gctccgggag attctgagga ccgtggagac caaagcgacg
     1081 cagaacttca aagtggtggc agccaagcac ctggcagggg tcctgctgca ctccctgagt
     1141 gaggactgtt actggagccc cctgtcccac cctttgcctg agttcatgag caaggaggag
     1201 aactctttca tcactcagac ccttcggaaa cctcacctct acgaaggaga caacctctac
     1261 tgcccaaaag acaacataga ggaggccctc ttgctgctgc tcatcagtga gtccatggca
     1321 actcgggacg tggtactgag ccgggcacca gagcaggagg aggaccggaa agtgagcctg
     1381 cagaatgctt cagccattta cgacctccta agcatcacac tgggccggcg aggccagtat
     1441 gtcatgcttt ctgagtgcct agaacgagcc atgaagtatg catttggaga atttcacctt
     1501 tggtaccaag tggccctctc catggtggct tgtgggaagt cagcctacgc cgtgtcgctg
     1561 ctacgtgagt gcatgaagtt gcagccctcg aaccccacag tgcccctgat ggctgccaag
     1621 gtctgcattg ggtccctgca ctggctggaa gaagcagaac actttgccat ggtggtaatt
     1681 ggccttggag aggaagcagg agagttcttg cctaaaggtt acctggccct gggcctcacc
     1741 tatagcctgc aggccactga cgccaccctg aagtccaagc aagatgaact tcaccgcaag
     1801 gcactgcaga cactggagcg agccctggaa ctggcacccg atgaccccca gattatcttc
     1861 tatgtctccc tgcagctggc cctcgtccga cagatctcca gtgctataga gcgtcttcag
     1921 gaggccctga cggtgtgcag ggatgacgcc aatgccctcc acttgctagc actgctcttc
     1981 tctgcccaga agcatcacca acatgccctg gatgtcatca acatggccat caccgagcat
     2041 cctgaaaatt tcaacctgat gttcaccaag gtgaagctgg agcaggtgct gaaaggcccg
     2101 gaggaagccc tcgtgacttg taggcaaatg ctgcgactgt ggcaggccct gtacaacttc
     2161 tctcagctgg ggggcctgga aaaggatggc agctttgaag gcctcacagt gaagaaacaa
     2221 aacgggattc acctgactct tccggacgcc catgacgcag actctggttc taggcgggca
     2281 tcatcgattg cagcctcaag gctggaggag gccatgtcag agctaaccat aacgacctcg
     2341 gtcctaaagc agggccccat gcagctgtgg accacactgg agcagatctg gctccaggct
     2401 gctgagctgt tcatggagca gagacaactc aaggaagcag gtttctgcat ccaggaggct
     2461 gctggcctct tccccacctc tcactcggtg ctctacatgc gaggccggct ggctgaggtg
     2521 aagggcagct ttgaagaggc caagcagctg tacaaggagg cactcaccgt gaacccggat
     2581 ggtgtttgca tcatgcacag cctggggctg attttgagtc ggctgggcca caagagcctg
     2641 gcccagaagg tgctgcggga tgccgtggaa aggcagagca cccaccacga agcatggcag
     2701 ggcctgggtg aggtgctgca ggaccaaggc cacaatgaag ctgctgctga ctgcttcctc
     2761 accgcgctgg agctggaggc cagcagccct gtgctcccct tctccatcat cgccagagag
     2821 ctgtgagcat ctgcagcagc tgcaggctgt ccgcaggcag gggggcaggg aagggcacca
     2881 tccggatgtg ggggcctcag ggaatagatg actagtgaac acttccacgg gctcccatgc
     2941 cacttctccc ccacactcca caccctgcag gcccacatgg gcctgagctc ctgtctgaaa
     3001 ctgggtggac aagatttgca tccaaagcaa atgccttgct ccccagaggc tgactttgcc
     3061 gagctccttt cggataaaag gtgtgtctta gagcccagac ccgtcctcag cctcctgagc
     3121 ccctggacgt cctgctttgg agtgaaccag tcttgagttt gtgtaccata gagatgaact
     3181 tgcttgccag ccgtcctccg gctggccaga cttttcctgg atgcctttct ttgtgccttg
     3241 ggagacaaac tggcttgaat ctaagtgacc tcacagagct gtgagcaggc atgctggaga
     3301 accccggata cattccccca accagtctcc cggcagtgca aacttgcagc cttgccgagg
     3361 acagccacag cttaaggtct cagacaggga ggacagtggt ctcctgggcc ctgtcagact
     3421 gaatcagcgc tgttgattgt ctggtgtttc ctttgtgggg gctacacgtg tgttctatgt
     3481 accaccacca agtgcctttg ggaattttgt caggccaggt ctctaaacac gttcatggtc
     3541 atctccctag agacacgccc cagccagtaa actccgaggg ccccttgcca ggggcctctg
     3601 ggacaggcct tggaatatta aacagggctc tgacctagcc atttctagta ccttgagtgc
     3661 acagtccttc aaggctttcc ctacagtgca ggccccgccc acttgggtga gtgacaccag
     3721 cccagttcac ctcatcttcc actgcccagt cttcacctta gactttgctg agtgacccaa
     3781 agcacccgct tggcctttca tgctccctgc tcagattccc atggaggcca tgcttgggta
     3841 gaaacgaaag agggacctga ctgcctcgcc tttctttgcc ctgtgctctg tcacatcgct
     3901 gggcagatgt cccttcctga ctcatcagcc atgcactcta gttttgaaac tccctcagga
     3961 agccatcccc cacacctagc agagagtgcc tttctgtctc ccctctctct gggtggaagc
     4021 tccttctggt ctaccttgct cttgtattag aatgtgtcag gagggttgag agctgcccca
     4081 tggccaacca cagtttcctt ggaaggagaa agcccttgga gatgggctcc tttgtactga
     4141 cttaccctgc ttgtctcctc gtgtccccag agagccagtg ccttctagcc acagccacag
     4201 gccaagggga ggatattcag tccttggttg aatggtctat gtgtctatgt gtatataaat
     4261 atagatatat atatgcgaga gatctatatt tttatggcat tctcttagag ttaagaaaaa
     4321 aagcagatac tgctcataca ccttggtggt cggtcttggc ggtgggaaag acagcaaatg
     4381 catctgactt agcattacct ctttggaggc catgggagac aggcccagca cttcacaata
     4441 tctttagaaa ttgaataaaa gacccgtgaa ggggaaaggg gaaaaaaaaa aaaaaaaaaa
     4501 aaaaaaa
//
