LOCUS       NM_001106706            2821 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus tetratricopeptide repeat domain 27 (Ttc27), mRNA.
ACCESSION   NM_001106706 XM_001065384 XM_216644
VERSION     NM_001106706.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473947.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_216644.4, XM_001065384.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2821
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q13"
     gene            1..2821
                     /gene="Ttc27"
                     /gene_synonym="RGD1305264"
                     /note="tetratricopeptide repeat domain 27"
                     /db_xref="GeneID:298782"
                     /db_xref="RGD:1305264"
     exon            1..267
                     /gene="Ttc27"
                     /gene_synonym="RGD1305264"
                     /inference="alignment:Splign:2.1.0"
     CDS             168..2711
                     /gene="Ttc27"
                     /gene_synonym="RGD1305264"
                     /codon_start=1
                     /product="tetratricopeptide repeat protein 27"
                     /protein_id="NP_001100176.1"
                     /db_xref="GeneID:298782"
                     /db_xref="RGD:1305264"
                     /translation="MPGVIWTPELALLRGFSTEAERLLWKQEGICGSDIGVFLELLLE
                     GSYEALFLHSTTQNILNSTMMAEEKIDSYLEKQIVNFLDCSTDLEEIERQQLVFLLGV
                     SSLQLFVQSNWTGPLVDLHPQDFLPSVLLEKFSEVRGLDASIMALLILDGESVYSLTS
                     KPILLLIARIILVNIRHKLTALQSLPWWTLRYVNIHQQLLEERSPQLFALAENCIDQV
                     TKKENLFEGDSGRLLAIQFHLECAHVFLYYYEYKEAKDRFSTAKDISKLQIDLTGALG
                     KRTRFQENYVAQLIVDVRREEDVPCSREFSPAPTPQEYLTKNLELNDDTVLNEIKLAD
                     SERFQMPDLCAEELAVVLGVCTNFQKNNPVHKLTEEELLAFTSCLLSQPKFWAIQTSA
                     LILRTKLERGSTRRVERAMRQTQALADQFEDKTTSVLERLKIFYCCQVPPHWAVERQL
                     AGLLFELGCTSSALQIFEKLEMWEDVVICHERAGQHGKAEEILRQELEKKETPSLYCL
                     LGDVLQDHSCYDKAWELSRHRSARAQRSKALLHLRNKEFRECVECFERSVKINPMQLG
                     VWFSLGCAYLALEDYGGSAKAFQRCVTLEPDNAEAWNNLSTSYIRLKQKVKAFRTLQE
                     ALKCNYEHWQIWENYILTSTDVGEFGEAIKAYHRLLDLRDKYKDVQVLKILVRAVVNG
                     MADRSGDIASSLKGKLQELFGRVTSRVTNDGEVWRLYAQVHGNGQSEKPAENDKAFQY
                     LSKAYKCDTQSGCWEKDATAFKEVVQRAIGLAHVAIKCSESKSSPQEAIQALSSVRLN
                     LRGLLSKAKQNFTDVVSGDVSGELASEIAAMRALEAELQDLSNQLRNRY"
     exon            268..445
                     /gene="Ttc27"
                     /gene_synonym="RGD1305264"
                     /inference="alignment:Splign:2.1.0"
     exon            446..575
                     /gene="Ttc27"
                     /gene_synonym="RGD1305264"
                     /inference="alignment:Splign:2.1.0"
     exon            576..716
                     /gene="Ttc27"
                     /gene_synonym="RGD1305264"
                     /inference="alignment:Splign:2.1.0"
     exon            717..819
                     /gene="Ttc27"
                     /gene_synonym="RGD1305264"
                     /inference="alignment:Splign:2.1.0"
     exon            820..984
                     /gene="Ttc27"
                     /gene_synonym="RGD1305264"
                     /inference="alignment:Splign:2.1.0"
     exon            985..1118
                     /gene="Ttc27"
                     /gene_synonym="RGD1305264"
                     /inference="alignment:Splign:2.1.0"
     exon            1119..1231
                     /gene="Ttc27"
                     /gene_synonym="RGD1305264"
                     /inference="alignment:Splign:2.1.0"
     exon            1232..1298
                     /gene="Ttc27"
                     /gene_synonym="RGD1305264"
                     /inference="alignment:Splign:2.1.0"
     exon            1299..1412
                     /gene="Ttc27"
                     /gene_synonym="RGD1305264"
                     /inference="alignment:Splign:2.1.0"
     exon            1413..1508
                     /gene="Ttc27"
                     /gene_synonym="RGD1305264"
                     /inference="alignment:Splign:2.1.0"
     exon            1509..1631
                     /gene="Ttc27"
                     /gene_synonym="RGD1305264"
                     /inference="alignment:Splign:2.1.0"
     exon            1632..1859
                     /gene="Ttc27"
                     /gene_synonym="RGD1305264"
                     /inference="alignment:Splign:2.1.0"
     exon            1860..1958
                     /gene="Ttc27"
                     /gene_synonym="RGD1305264"
                     /inference="alignment:Splign:2.1.0"
     exon            1959..2011
                     /gene="Ttc27"
                     /gene_synonym="RGD1305264"
                     /inference="alignment:Splign:2.1.0"
     exon            2012..2177
                     /gene="Ttc27"
                     /gene_synonym="RGD1305264"
                     /inference="alignment:Splign:2.1.0"
     exon            2178..2375
                     /gene="Ttc27"
                     /gene_synonym="RGD1305264"
                     /inference="alignment:Splign:2.1.0"
     exon            2376..2487
                     /gene="Ttc27"
                     /gene_synonym="RGD1305264"
                     /inference="alignment:Splign:2.1.0"
     exon            2488..2588
                     /gene="Ttc27"
                     /gene_synonym="RGD1305264"
                     /inference="alignment:Splign:2.1.0"
     exon            2589..2821
                     /gene="Ttc27"
                     /gene_synonym="RGD1305264"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caggattccc tgcgctgctg tcatgtctgc ctccatgtac atggatcctc acatgggact
       61 ctaggcttgt gtctttactc tacctgtcct gactagacgc cggcgacatt ggaccctctc
      121 actttcgctt ttctcctccc tcgtgggaca ctgtacgggg tgcagcgatg ccgggggtga
      181 tatggacgcc ggagctggcg cttctgaggg gcttctccac ggaggcagag cggctgttat
      241 ggaaacagga gggcatctgt ggttcagata ttggagtttt cttagaattg ctgttagaag
      301 ggagctatga ggccttgttc ctgcattcaa caacacagaa tattttaaat tcaacaatga
      361 tggccgaaga aaagattgac agctacctgg agaagcagat agtgaatttc ctggattgct
      421 ctacggattt ggaagaaatt gaaagacagc agctggtatt cctacttggt gtgagcagct
      481 tgcagctttt tgttcagagt aactggactg gacctcttgt cgacttgcac cctcaggatt
      541 tcttgccgtc tgttctgctt gagaagttca gtgaggtcag aggactggac gctagtatta
      601 tggccctcct cattctagat ggtgaatcag tctacagcct cacttcaaag cccatactgc
      661 tgctaatagc acgcattatc ctggtgaaca tcagacataa attaacagct ctccagagct
      721 tgccgtggtg gactttgaga tatgtgaata ttcaccaaca gttgctggag gagcggtcac
      781 cacagctttt tgctcttgct gaaaactgta ttgatcaagt gacgaaaaaa gagaatctat
      841 ttgagggtga ctcaggtcga cttttggcta ttcagtttca tctggaatgt gcacatgtat
      901 ttttatatta ttatgaatat aaagaagcaa aagaccggtt cagtactgct aaagacatca
      961 gcaagttaca gattgacctg acaggtgctt tggggaaaag gacacgattc caggagaatt
     1021 atgtggcaca gctgattgta gatgtccgga gagaagagga tgtcccttgc agtcgtgagt
     1081 tcagcccagc acccaccccc caggagtatt taaccaagaa tcttgagctc aacgatgata
     1141 ccgttctgaa tgaaataaag ttagcagata gtgagcggtt tcagatgcca gacctgtgtg
     1201 ctgaggagct tgctgtggtc cttggagtct gcacaaattt ccagaagaac aacccagttc
     1261 ataagctaac ggaggaggag ctgctggcct tcacatcgtg tttactttca caaccaaagt
     1321 tctgggccat tcagacctca gccttgatcc tccggacaaa acttgagaga ggaagcacac
     1381 ggcgagtgga gcgggcaatg aggcagaccc aggctcttgc agaccaattt gaagataaaa
     1441 ccacatctgt actggagcgt ctgaagattt tctactgctg tcaagtgccc cctcactggg
     1501 ctgtcgagcg ccagctcgca ggtttgctgt ttgagttggg atgcaccagc tcagccctgc
     1561 agatatttga gaagctggag atgtgggagg acgtagtcat ctgccatgaa agggctgggc
     1621 agcacgggaa ggcagaagaa attcttaggc aagaactgga gaagaaggaa acaccaagtt
     1681 tatattgctt gcttggagat gtcctgcaag atcactcctg ctatgacaag gcctgggagc
     1741 tgtcccgaca ccgcagtgcc cgtgcccagc ggtccaaagc tctcctccat cttcggaaca
     1801 aggagtttcg ggagtgtgtg gagtgctttg aacgctcagt gaagattaat cccatgcagc
     1861 ttggggtctg gttttctcta ggctgtgcct acttggcctt ggaagactat ggtggctcag
     1921 cgaaggcatt tcagcgttgt gtgaccctag agcccgacaa tgctgaggct tggaacaatt
     1981 tatccacttc ctatattcga ctgaaacaaa aagtcaaagc ttttagaacg ttacaagaag
     2041 ctctcaagtg taactatgaa cactggcaaa tctgggaaaa ctacatcctc accagcactg
     2101 acgtcgggga gtttggggag gccatcaaag cttaccaccg gctcctggac ctgcgagaca
     2161 aatacaaaga tgttcaggtc cttaaaattc tggtcagggc agtggttaat ggtatggctg
     2221 accggagtgg agatattgcc tccagcctca aaggcaagct gcaggagttg ttcggcagag
     2281 tcacttcaag ggtgacgaat gacggagaag tctggagact gtatgcccaa gtacatggga
     2341 atgggcagag tgagaagcct gctgagaatg acaaggcatt ccagtatctc tcaaaggcgt
     2401 acaagtgcga cacacagtcc ggttgttggg agaaagatgc tacagcattt aaggaagttg
     2461 ttcaaagagc cataggactg gcgcatgtgg ctataaaatg cagtgagagc aagtccagtc
     2521 cccaggaagc tatacaagca ctttcttcag tccggctcaa tttacgtggc ttgttatcca
     2581 aagcaaagca gaattttacg gacgtagtga gtggagacgt ctcgggagag ctagccagtg
     2641 agatagcagc tatgagagct ctggaggccg agctgcagga cctcagcaac cagcttcgaa
     2701 accggtactg actgagaatc agcttgtggc cgtcacttat gtcgtctcca attcctccag
     2761 tacctgtaga tgaaacacca gatgccaatt tttaaaataa atttgtttgc cggcaaacgt
     2821 a
//
