LOCUS       XM_039103748            2243 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus tetratricopeptide repeat domain 24
            (Ttc24), transcript variant X2, mRNA.
ACCESSION   XM_039103748
VERSION     XM_039103748.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2243
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2243
                     /gene="Ttc24"
                     /note="tetratricopeptide repeat domain 24; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 ESTs, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:100361582"
                     /db_xref="RGD:2319887"
     CDS             468..2036
                     /gene="Ttc24"
                     /codon_start=1
                     /product="tetratricopeptide repeat protein 24 isoform X1"
                     /protein_id="XP_038959676.1"
                     /db_xref="GeneID:100361582"
                     /db_xref="RGD:2319887"
                     /translation="MLPSGTQEVRKKKEKKKRLQEEAKIQSLTRAGHRALHAAQIQEA
                     LGSFQKAFLLASKAPSTRDSPVLRACAFNLGAAYVETGDPATGLELLLRARPEEKSAG
                     WCHGDQCFNVALAYHSLGDLTQALDWYCRALGHYQPQSYHGEAQAKIGACYQALGWPK
                     QAACSLQEASQAYAHTGRLWDAALAQVAAVRCMLSSRQYRLSEVLQALEESRKLADAD
                     RGADQGLLGPFYNDVGMGYFQLQLFPLAVEAFLQALPLCRQAAEQATVLQNLGMTHNV
                     LGNYWEAQEFHQKAVDLHGSVGQRWEQGRSFSGLAFSLSQLGDHRAAWDSYLHALQAA
                     QDTGDVKGQWQACEGLGAAAARLGQHDQALKYYKEALALCQHEPSSIRERLVAKLADA
                     TRTFVTQEKLAQAHFLPSVPGKLQTSWEASLEAKNSARVHSSAEDAQDSRSEEGREKK
                     KEGLMNMTIVLEPQRQDCLGASEHLPSGGPWPRGVEHLVNTAPNNRSSIGTKEALGRN
                     LQRTSIQSGLCTIV"
ORIGIN      
        1 agctctctgg ggaccagagc agaaaccgcc tgacagaaag tagaggagat aacaggaagg
       61 gcatagacat tgcagacaga cccctcccac atcggcctca gctttgagtg cccagggcta
      121 gactggcaca caccggagct gactgtgctg tattcccatt ggtttataaa gcagcagcac
      181 atgttcacaa gaccttgcat gagaggtgag agggtagccc tgtctatgct gtttggcttt
      241 tgtgaccttg ttggcctgga ctcactatgc aaaccagact ggccttgaac tcacagagat
      301 ctgcctgtct ttatatcctg acttggggtt aaagggactt ttgtttggtc tggttttggt
      361 tttggtgaca tggaggattg gattcacaga agcagctttc agaaagttac ttggtctgag
      421 ttcctgacaa agaacttgga agagctctaa agagagaggg agtcaaaatg ctgcccagtg
      481 ggacacagga agtaaggaag aaaaaagaga aaaagaagag gctgcaagaa gaagccaaga
      541 tccagagcct caccagggct ggccacaggg ccttgcatgc tgcccagatt caggaggcct
      601 tgggcagctt ccagaaggcc ttcctgctgg cctccaaggc cccatcaacc agagatagcc
      661 ctgttcttcg agcctgtgcc ttcaacctag gggctgccta tgtggagact ggagacccag
      721 ccacaggtct tgagctactt ctgagagccc gtcctgaaga gaagtctgca ggctggtgtc
      781 atggcgacca gtgtttcaat gtggctttgg cctatcattc ccttggtgac ctgactcaag
      841 ctttggactg gtactgcagg gctttgggcc attaccagcc acagagctac catggggaag
      901 cacaggcaaa aataggagcc tgctaccagg ccctgggctg gcccaagcaa gcagcctgca
      961 gtttgcagga agctagccag gcctatgctc acacaggccg gctctgggat gcagccctgg
     1021 ctcaggtggc tgctgtgaga tgtatgctga gcagccggca gtatagactg agtgaagtgt
     1081 tgcaggctct ggaggagagc cgtaagcttg ctgatgctga ccggggcgct gaccagggac
     1141 tgctggggcc attctacaat gatgtaggca tgggttactt ccaactccag ctgttccctc
     1201 tggcagtaga ggccttcctg caggccctac ccctgtgtcg acaggcagca gagcaggcta
     1261 cagtgcttca aaaccttgga atgacccaca atgtccttgg caactattgg gaagcgcagg
     1321 agtttcacca gaaggctgtc gatctgcatg gctctgtggg ccagcggtgg gagcagggtc
     1381 gcagctttag cggcctggca ttttcactga gccagctggg ggaccacagg gctgcctggg
     1441 acagctattt gcatgccctg caggctgccc aagacactgg ggacgtgaag ggacagtggc
     1501 aggcgtgtga gggccttggg gcagctgcag ccagactggg gcaacatgac caagccttga
     1561 aatattataa ggaagcgctg gccctgtgtc agcacgaacc aagttctata cgagagcggc
     1621 ttgtggccaa actggcagat gccacgcgga ccttcgtgac tcaggagaag ctagcccagg
     1681 ctcattttct gccatctgtt cctggaaaac tccagacttc atgggaggcc tccctagagg
     1741 caaagaactc agctagggta cacagtagtg cagaagatgc ccaggacagt aggtcagaag
     1801 aaggccgtga gaagaaaaag gaggggctga tgaacatgac tattgtgtta gaacctcaga
     1861 gacaggactg cttaggagcc tcagaacatc ttccatctgg aggcccatgg cccagaggag
     1921 tggaacatct cgtcaacaca gcacccaaca ataggtcatc catagggacc aaggaagccc
     1981 tgggcaggaa cctccagagg acatccatcc agtctggcct ctgcaccatc gtgtgaccta
     2041 gacctgttgg ctgcagcgct cacctccaca ggaacttccc agtagaggcc tttagggcct
     2101 tggggaggac cttcagtatg gatgtgggca tggtgaacag acagccaagg gttctgctga
     2161 ctccacattg agattctctt tgctcttctt tgggggaagg tctttaactc agtagaccaa
     2221 aacaaaaagc aaaacctggg aaa
//
