LOCUS       NM_001107752            4540 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus tetratricopeptide repeat domain 17 (Ttc17), mRNA.
ACCESSION   NM_001107752 XM_001078737 XM_230313
VERSION     NM_001107752.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4540)
  AUTHORS   Bontems,F., Fish,R.J., Borlat,I., Lembo,F., Chocu,S., Chalmel,F.,
            Borg,J.P., Pineau,C., Neerman-Arbez,M., Bairoch,A. and Lane,L.
  TITLE     C2orf62 and TTC17 are involved in actin organization and
            ciliogenesis in zebrafish and human
  JOURNAL   PLoS One 9 (1), e86476 (2014)
   PUBMED   24475127
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC168714.1.
            
            On Dec 3, 2010 this sequence version replaced NM_001107752.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168714.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4540
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q31"
     gene            1..4540
                     /gene="Ttc17"
                     /note="tetratricopeptide repeat domain 17"
                     /db_xref="GeneID:311224"
                     /db_xref="RGD:1305410"
     exon            1..165
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     CDS             7..3603
                     /gene="Ttc17"
                     /note="tetratricopeptide repeat protein 17; TPR repeat
                     protein 17"
                     /codon_start=1
                     /product="tetratricopeptide repeat protein 17 precursor"
                     /protein_id="NP_001101222.2"
                     /db_xref="GeneID:311224"
                     /db_xref="RGD:1305410"
                     /translation="MAAAIGVRGRFELLSCSGPGWLISLSALLSVVARGALATTHWVV
                     TEDGKIQQQVDSPMNLKHPHDLVILMRQETTVNYLKELEKQLVAQKIHIEENEDRDTG
                     LEQRHNKEDPDCIKAKVPLGDLDLYDGTYITLESKDVRPEDFIDTESPVPPDPEQPDC
                     TKILELPYSIHAFQHLRGVQERVNLSAPLLPKEDPIFTYLSKRLGRSIDDIGHLIHEG
                     LQKNSSSWVLYNLASFYWRIKNEPYQVVECTMRALHFSSRHNKDIALVNLANVLHRAH
                     FSADAAVVVHAALDDSAFFTSYYTLGNIYAMLGEYNHSVLCYDHALQAKPGFEQAIKR
                     KHAVLCQQKLEQKLEAQHRSLQRTLNELKEYQKQHDHYLRQQEILEKHKLIQEEQILR
                     NIIHETQMAKEAQLGNHQICRLVNQQHSLHCQWDQPVRYHRGDIFENVDYVQFGDDSS
                     TSSMMSVNFDVPTNQSDVSESVRSSPVAHSVLWVWGRDSDAYRDKQHILWPKRADCTD
                     SYPRVPLGGELPTYFLPPENKGLRIHELTSDDYSSEEEAQTPDCSITDFRKSHTLSYL
                     VKELEVRMDLKAKIPDDHARKILLSRIKNYTIPEEEIGSFLFHAINKPNAPVWLILNE
                     AGLYWRAVGNSTFAIACLQRALNLAPVQYQDIPLVNLANLLIHYGLHLDATKLLLQAL
                     AVNSSEPLTFLSLGNAYLALKNVSGALEAFRQALKLTTRCPECESSLKLIRCMQFYPF
                     LYNITSSVCSGHCHEKTLDNSHDKQKYFAKPQSLDAAEEEPSRHGADEDPVLSVENAG
                     RDSDALRLESTVVEESNGSDEVEKSEETKMSEEILALVDEFQQAWPLEGLGGTLEMKG
                     RRLDLQGIRVLKKGPQDGVAKSSCYGDCRSEDDEATEWITFQVKRVKKPKGDHKKPPG
                     KKVEASQAENGQRYQANLEITGPKVASPGPQEKKRDYQSMGWPSPDECLKLRWVELTA
                     IVSTWLAVSSKNIDITEHIDFATPIQQPAMEPLCNGNLPTSMHTLDHLHGVSNRASLH
                     YTGESQLTEVLQNLGKDQYPQQSLEQIGTRIAKVLEKNQTSWVLSSMAALYWRVKGQG
                     KKAIDCLRQALHYAPHQMKDVPLISLANILHNAKLWNDAVVVATMAVEIAPHFAVNHF
                     TLGNVYVAMEEFEKALVWYESTLKLQPEFVPAKNRIQTIQCHLMLKKGRRSP"
     exon            166..255
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            256..425
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            426..537
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            538..669
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            670..779
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            780..924
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            925..1064
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            1065..1225
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            1226..1338
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            1339..1485
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            1486..1601
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            1602..1767
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            1768..1845
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            1846..2070
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            2071..2257
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            2258..2428
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            2429..2688
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            2689..2842
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            2843..2963
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            2964..3123
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            3124..3207
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            3208..3327
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            3328..3471
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
     exon            3472..4514
                     /gene="Ttc17"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggcaagatgg cggcggcaat aggggtccgc ggccggttcg agctgctatc ttgctccggc
       61 ccaggttggc ttatcagcct ttccgctttg ctgagcgtgg tggctcgagg ggccttggcc
      121 actacgcact gggtcgtcac ggaggacggg aagatccaac agcaggtgga ctcaccaatg
      181 aacttgaagc atccccatga cttagtcatc ttaatgagac aagaaacaac cgttaactac
      241 ctcaaagaac tagagaaaca attagttgct caaaaaattc acatagagga gaatgaggac
      301 agagacacag gactggaaca gaggcacaat aaagaagacc ccgactgcat caaggccaaa
      361 gtgcctttgg gagacctgga cctttatgac ggcacatata taactctaga gagcaaggat
      421 gtcaggcctg aggatttcat agacacagaa tctcctgtcc ctccagaccc agagcaacct
      481 gattgtacta aaatcctaga gcttccatat agtatacatg cttttcagca tttacggggt
      541 gtacaagaga gagttaatct ctctgcccct ctcttaccta aagaagatcc aatcttcaca
      601 tatttgtcga aacgcttagg aaggagtatc gacgacatag gtcacctcat tcacgaaggc
      661 ctacagaaga actcttcctc ctgggtactg tataacctag cttcatttta ctggagaata
      721 aagaatgagc catatcaggt agtggagtgc accatgcgag ctcttcactt ctcttccagg
      781 cacaataaag acattgccct ggtcaatttg gccaatgttc tacacagagc gcatttctcc
      841 gcggatgctg ctgtcgtggt ccatgcagct ctggatgaca gtgccttctt caccagctat
      901 tacacactgg ggaatatata tgcaatgctc ggggagtata accattcggt gctctgttac
      961 gaccatgctt tgcaagccaa acctgggttt gagcaagcta taaagaggaa gcatgctgtc
     1021 ctgtgtcaac aaaaactgga gcagaagcta gaggctcagc ataggtccct tcagagaaca
     1081 ctgaatgagt tgaaggagta ccagaagcag catgaccact acctgcggca gcaggagatc
     1141 ctagagaagc acaaactgat tcaggaggag cagatcttgc gcaacatcat ccacgagaca
     1201 cagatggcca aagaggcaca actgggaaat catcagatat gcaggctggt caaccagcag
     1261 catagtttgc actgccagtg ggaccaacct gtacgctacc atcgaggaga catctttgaa
     1321 aatgtggact atgttcagtt tggtgatgat tcatcgacct ccagtatgat gtccgtgaac
     1381 ttcgatgtcc ctacaaatca gagtgacgtc agcgaatctg tcaggtcttc tcctgtagcg
     1441 cattctgttc tctgggtctg gggccgtgac tctgatgcat atagggacaa acaacatatt
     1501 ctttggccta aaagagcaga ttgtacagac agctatccca gagttcccct cggtggagaa
     1561 ctgccaacat acttcctgcc tccggagaac aaaggactca ggatccacga actgaccagt
     1621 gatgattatt cttcagaaga ggaggcccaa acccctgact gttccataac tgacttcaga
     1681 aaaagccaca ctctgtccta cttagtcaaa gaattagagg tccgcatgga tctgaaagcc
     1741 aaaatccccg atgaccatgc acgcaaaatt ttactttccc gtattaaaaa ctatactatc
     1801 ccagaagaag aaattgggtc tttcttgttt catgctatta acaagccaaa tgctcctgtc
     1861 tggctcattc tgaatgaggc gggcctgtac tggagagcag taggaaacag cacttttgct
     1921 atcgcctgcc ttcagagggc tttgaattta gctccagttc aataccaaga cattcctctt
     1981 gtcaacctgg ccaacctttt gattcattat ggccttcatc tcgatgctac aaagttgctc
     2041 ctgcaagcac tggctgtcaa cagctccgag cccctgacct ttttgagcct gggaaatgct
     2101 taccttgctc tgaagaatgt cagcggggca cttgaagcct tcagacaggc cttgaagtta
     2161 accaccagat gcccagagtg tgagagcagc ctgaagctga tccgctgcat gcagttttac
     2221 ccttttctgt acaacatcac ctcttctgtt tgtagtggtc attgtcatga gaaaaccctg
     2281 gacaacagcc atgacaaaca gaaatacttt gccaagccac agtcattgga tgctgctgaa
     2341 gaagagccct ctaggcacgg agcagacgag gaccctgtgc tgtctgttga gaacgcaggg
     2401 agggactcag atgcccttag acttgaaagc acagtggttg aagagagcaa cggttctgac
     2461 gaggtggaga agtcagagga aacaaagatg tcagaagaga tactggcctt ggtggatgag
     2521 tttcagcagg cctggcctct ggaaggtttg gggggaacat tagaaatgaa ggggcggcgt
     2581 ctggacctgc agggaatacg ggtcctgaag aaagggcccc aggatggagt agccaagagc
     2641 tcttgctatg gagactgcag aagtgaagat gatgaagcaa cagaatggat cacattccag
     2701 gtcaagcgtg taaagaaacc caaaggggat cataaaaaac ctcctgggaa aaaagtagag
     2761 gcaagtcaag cagaaaatgg acagcgttac caagcaaact tagagatcac aggcccaaag
     2821 gtggcatctc ctgggcccca ggaaaaaaag cgtgactacc agagtatggg gtggcccagt
     2881 ccagatgagt gcctcaagct ccgctgggta gagctaactg ccattgtgag cacctggcta
     2941 gcagtgtctt caaaaaacat tgacatcaca gaacacatag actttgccac acccatacaa
     3001 cagccagcaa tggaacctct gtgcaatggc aatctcccca caagcatgca taccctggac
     3061 cacttacatg gagtgtccaa cagagccagc ctgcactaca ccggtgagag ccagctaaca
     3121 gaggtactgc agaatcttgg caaggaccag taccctcagc agtcgcttga acaaatcggc
     3181 acccgaattg ccaaggtttt ggaaaaaaat cagacatcat gggtcctttc cagcatggca
     3241 gccctctact ggagagtgaa aggtcagggg aaaaaagcca tcgactgcct gcgccaggcc
     3301 ctccactatg ctccccacca gatgaaggat gtgcccctca tcagcctggc caacatccta
     3361 cacaatgcca agctctggaa tgatgctgtc gtcgtggcca ccatggccgt ggagatcgcg
     3421 ccacacttcg ctgtgaacca cttcactctg ggcaatgtct atgtggcaat ggaagaattt
     3481 gagaaggccc tggtgtggta cgagtcaacg ctgaagctgc aaccagagtt tgtacctgcc
     3541 aagaatcgaa tccagacaat ccagtgccac ctcatgctga agaagggccg gcgctctccc
     3601 tagagcactc cttcctgtcc ctcagctctc ccagccctcg tgaacagagc cccatcactg
     3661 ctggtatccg catggatgat gtgtgtgaat tgccaagtaa agtgtagcag agctcagctg
     3721 ccagggcttc taagttcttc ctcatctcca gaagcagggt tccccagaca ctgtaaatac
     3781 tgagccagga caactcggag ctccgctccg tcttccaaac ctccatgcct tcaaggctcc
     3841 tctgtggtcc agccttttcc ctggggaggc cagagccaca ctgcccattc tctgcttcct
     3901 gtgtagcctc tgttgtccct ggaattgcaa tgccacctgg ggccagtcag tgagaagcag
     3961 ggattctcca tgtccccacc agctctcctc tctgacccag tctcatccat tccacgctgc
     4021 tatgttacaa gctctcagag atagtttgca ggggaggaag gggaaacaac tttacaaaca
     4081 aaatatttac aacagcagaa actcttaggg tcacctgacc tttgtaagtt atttatgttg
     4141 gggcgggagg ggggctgagc aggggagtca gccgtgtgca acatctttat catttgtatt
     4201 ttaattgccg atcacaagga aaccaataca ttcaagtcct atataacagg tttatatata
     4261 tagaatatgt gtatttgaag ccctctacag accgagtctg tattactaat tccttgttcg
     4321 ctgtgtttca tgtcttggac taggcgtgac tgtcagccct ctctctgagg ctgacaccca
     4381 gctcctcaga acagagccag gagccaaggt tgggtgccct tacctgtggt ccctggagaa
     4441 tcaaaaactc caacattttg gattctttaa gggcacatcc tgagaacaaa aataaaaatt
     4501 gtttatgagc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//
