LOCUS       NM_019203                795 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus testis specific X-linked gene (Tsx), mRNA.
ACCESSION   NM_019203
VERSION     NM_019203.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 795)
  AUTHORS   Simmler,M.C., Cunningham,D.B., Clerc,P., Vermat,T., Caudron,B.,
            Cruaud,C., Pawlak,A., Szpirer,C., Weissenbach,J., Claverie,J.M. and
            Avner,P.
  TITLE     A 94 kb genomic sequence 3' to the murine Xist gene reveals an AT
            rich region containing a new testis specific gene Tsx
  JOURNAL   Hum Mol Genet 5 (11), 1713-1726 (1996)
   PUBMED   8922998
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On Nov 27, 2020 this sequence version replaced NM_019203.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: X99797.1, SRR26360181.2184538.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-164               JAXUCZ010000021.1  72493147-72493310
            165-200             JAXUCZ010000021.1  72494396-72494431
            201-234             JAXUCZ010000021.1  72495032-72495065
            235-316             JAXUCZ010000021.1  72496149-72496230
            317-420             JAXUCZ010000021.1  72500032-72500135
            421-479             JAXUCZ010000021.1  72501068-72501126
            480-795             JAXUCZ010000021.1  72503338-72503653
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq22"
     gene            1..795
                     /gene="Tsx"
                     /note="testis specific X-linked gene"
                     /db_xref="GeneID:29391"
                     /db_xref="RGD:3914"
     exon            1..164
                     /gene="Tsx"
                     /inference="alignment:Splign:2.1.0"
     CDS             71..505
                     /gene="Tsx"
                     /codon_start=1
                     /product="testis-specific protein TSX"
                     /protein_id="NP_062076.1"
                     /db_xref="GeneID:29391"
                     /db_xref="RGD:3914"
                     /translation="MSEEQEPKTSEAEYGTMDFPEFENEEEWLFKVLGIKPRPSSDLD
                     DADKQEDEPLGHTEFLRLQDILQEDKVSSTNDSDTCQAGYTEENDEASHSDSDIDDNV
                     NVIIGDIKANSSMYMEMFTNMNSQADQDLKLTESDNAMYPTD"
     exon            165..200
                     /gene="Tsx"
                     /inference="alignment:Splign:2.1.0"
     exon            201..234
                     /gene="Tsx"
                     /inference="alignment:Splign:2.1.0"
     exon            235..316
                     /gene="Tsx"
                     /inference="alignment:Splign:2.1.0"
     exon            317..420
                     /gene="Tsx"
                     /inference="alignment:Splign:2.1.0"
     exon            421..479
                     /gene="Tsx"
                     /inference="alignment:Splign:2.1.0"
     exon            480..795
                     /gene="Tsx"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agcacccacc tagacttggg tatcagctac accaacaggt ctcccccgac aggagccgaa
       61 tcccggagtt atgtctgaag agcaagaacc caagacttct gaagcagaat acggtacaat
      121 ggactttccg gaattcgaaa atgaagaaga atggcttttc aaagttctgg gaatcaagcc
      181 taggccttcc tctgatctgg atgacgctga taagcaggaa gatgagccac tgggccacac
      241 cgaatttctt cgcctgcaag atattcttca agaggacaaa gtcagcagta ccaatgatag
      301 cgacacttgc caagctgggt ataccgaaga aaatgatgag gccagccaca gtgacagcga
      361 cattgacgat aatgtgaacg tcatcattgg tgacattaaa gcaaactcct ccatgtatat
      421 ggagatgttc actaatatga actcacaagc tgaccaagac ctgaaactaa ctgaatcaga
      481 caatgccatg tacccaactg attaaacaag caaggatctg aaacgtgtca ccatcatcat
      541 ccttattggc ctcatgcatt acaaattaaa tggtgatggg gaaataaaac cttgttttta
      601 aagaaaatga catcatctct acacaccaac ctaaaagcaa atctatacca aactgctaca
      661 acaaatggag agtacttaat ttgagacctg actgttttga acgttggaaa tcctaacatt
      721 ctaaggtcat ctacaagcca actagtggaa tttgttgctt ttggaaggtt gaataaaatc
      781 tgcttgaaac cttta
//
