LOCUS       XM_039084458             978 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus translocator protein 2 (Tspo2),
            transcript variant X2, mRNA.
ACCESSION   XM_039084458
VERSION     XM_039084458.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086027) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..978
                     /gene="Tspo2"
                     /note="translocator protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 3 Proteins"
                     /db_xref="GeneID:682829"
                     /db_xref="RGD:1594018"
     CDS             297..785
                     /gene="Tspo2"
                     /codon_start=1
                     /product="translocator protein 2 isoform X2"
                     /protein_id="XP_038940386.1"
                     /db_xref="GeneID:682829"
                     /db_xref="RGD:1594018"
                     /translation="MQLQGPVFVGVPLLGPILIWMFTHQLSSRCEDEKKLPWCPPHKV
                     ILLVWATIYSVMGYASYLVWKDLGGGFRWSLALPLGLYSFQLALSWTFLMLFLVVDSP
                     GLALLDLLLLYGLVASMVLIWQPINKLAALLLLPYLAWLTVTTAITYRLWRDSLCPSY
                     QP"
     polyA_site      978
                     /gene="Tspo2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cacctctttc cagtctctcg ttggcttgtg ccttatacac atcctgaatc atcaggcctg
       61 ggaggtgtgt gcctgaggaa aaggatgttt tgattcagag gaaatctcta cacaacagtg
      121 ttacttccac gatggtcact gtcagcttca gtgagacacg gtctttgaga caccaaccgc
      181 ttgtaatctg cctggcagcc ccgtgacgcc tctggaggga gataaagatc aaacctggtc
      241 ctgacttcca ggagtcagat ggccactgta gagaaaatct tgcccctctg tggagaatgc
      301 agcttcaagg acctgtcttt gtgggtgtgc ccctcctggg gcccatcctg atttggatgt
      361 tcactcatca gctatccagt cggtgtgagg atgagaagaa gttaccttgg tgcccacccc
      421 acaaggtcat attgctcgtg tgggcgacca tctactctgt catgggctac gcctcctacc
      481 tggtatggaa ggacctcgga gggggcttcc ggtggtccct agccctgccc ctcggcctct
      541 actctttcca gctggccctc agctggacct tcttgatgct gttcttggta gttgacagcc
      601 ccgggctggc cctcctggac ctcttactgc tctatggact ggtggcaagt atggtgctta
      661 tctggcaacc aatcaacaag ctggctgctc tgctcctgct gccctacctg gcctggctca
      721 ctgtgaccac cgccatcacc taccgcctgt ggagggacag cctgtgtccg tcgtaccagc
      781 cttagccacc caagaagagc aactgaagca ccgggataca gaaggaggga ggacggcaag
      841 aaagcggaga agctgtgggg ctaagtggtg tggccacact cctggatctt cctgctgccc
      901 tatctcctta cacttgagag atgtagaaaa caaggggcgc tttctgacac acaataaaac
      961 cctgttgttg accctgaa
//
