LOCUS       NM_001013070            1435 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus tetraspanin 4 (Tspan4), mRNA.
ACCESSION   NM_001013070 XM_215114
VERSION     NM_001013070.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1435)
  AUTHORS   Kuo,J.C., Han,X., Hsiao,C.T., Yates,J.R. 3rd and Waterman,C.M.
  TITLE     Analysis of the myosin-II-responsive focal adhesion proteome
            reveals a role for beta-Pix in negative regulation of focal
            adhesion maturation
  JOURNAL   Nat Cell Biol 13 (4), 383-393 (2011)
   PUBMED   21423176
REFERENCE   2  (bases 1 to 1435)
  AUTHORS   Tachibana,I., Bodorova,J., Berditchevski,F., Zutter,M.M. and
            Hemler,M.E.
  TITLE     NAG-2, a novel transmembrane-4 superfamily (TM4SF) protein that
            complexes with integrins and other TM4SF proteins
  JOURNAL   J Biol Chem 272 (46), 29181-29189 (1997)
   PUBMED   9360996
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC091174.1.
            
            On Mar 26, 2005 this sequence version replaced XM_215114.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC091174.1, EV778179.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1435
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q41"
     gene            1..1435
                     /gene="Tspan4"
                     /gene_synonym="Tm4sf7"
                     /note="tetraspanin 4"
                     /db_xref="GeneID:293627"
                     /db_xref="RGD:1305810"
     exon            1..249
                     /gene="Tspan4"
                     /gene_synonym="Tm4sf7"
                     /inference="alignment:Splign:2.1.0"
     exon            250..329
                     /gene="Tspan4"
                     /gene_synonym="Tm4sf7"
                     /inference="alignment:Splign:2.1.0"
     CDS             267..983
                     /gene="Tspan4"
                     /gene_synonym="Tm4sf7"
                     /note="transmembrane 4 superfamily member 7;
                     tetraspanin-4-like"
                     /codon_start=1
                     /product="tetraspanin-4"
                     /protein_id="NP_001013088.1"
                     /db_xref="GeneID:293627"
                     /db_xref="RGD:1305810"
                     /translation="MARGCLQGVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGNFATL
                     SSSFPSLSAANLLIVTGTFVMAIGFVGCIGALKENKCLLLTFFVLLLLVFLLEATIAV
                     LFFAYSDKIDSYAQQDLKKGLHLYGTEGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVY
                     NATRVPDSCCLEFSDSCGLHEPGTWWKSPCYETVKAWLQENLLAVGIFGLCTALVQIL
                     GLTFAMTMYCQVVKADTYCA"
     exon            330..521
                     /gene="Tspan4"
                     /gene_synonym="Tm4sf7"
                     /inference="alignment:Splign:2.1.0"
     exon            522..596
                     /gene="Tspan4"
                     /gene_synonym="Tm4sf7"
                     /inference="alignment:Splign:2.1.0"
     exon            597..698
                     /gene="Tspan4"
                     /gene_synonym="Tm4sf7"
                     /inference="alignment:Splign:2.1.0"
     exon            699..830
                     /gene="Tspan4"
                     /gene_synonym="Tm4sf7"
                     /inference="alignment:Splign:2.1.0"
     exon            831..914
                     /gene="Tspan4"
                     /gene_synonym="Tm4sf7"
                     /inference="alignment:Splign:2.1.0"
     exon            915..1410
                     /gene="Tspan4"
                     /gene_synonym="Tm4sf7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cccgaacccc gccgcagctc tgcctccgct cccgtgatta ctctgaagtg gcggtgttct
       61 ttgctggcgc ccacccgagg ctcctagagc ctccgtgccg gcggcagcat cccgagtacc
      121 ccctcccgca gtggtggtat atcccggcta cggcatccga gcaaggccga aaggcccgcg
      181 gcgccagcgg ttcgcgtttc tcgtgttgcc ttgattgaca gctgctccgc cgtgcggtgg
      241 cgcgcacaga gctgaagcgc tgcagcatgg cgcgcggctg cctccagggt gtcaagtacc
      301 tcatgttcgc cttcaacctg ctcttctggc tgggtggctg tggtgtcctg ggtgttggca
      361 tctggttggc tgccacacag ggaaactttg ccaccctgtc atcctcattc ccatccttgt
      421 ctgctgccaa tctgctcatc gtcaccggta ccttcgtcat ggccatcggc ttcgtgggct
      481 gcattggggc cctcaaggag aacaagtgcc tactgctcac tttctttgtg ctgctgctgc
      541 tagtgttcct gctggaagcc accattgctg tgctcttctt tgcctacagt gacaagattg
      601 acagttatgc ccagcaagat ctgaagaagg gcctgcatct gtatggcaca gagggcaatg
      661 tgggcctcac caatgcctgg agcatcatcc agactgattt ccgatgctgt ggagtttcca
      721 attacactga ttggtttgag gtatacaatg ccactcgtgt gcctgactcc tgctgtctgg
      781 agttcagtga cagctgcggg ttacatgaac ctggtacctg gtggaagtcg ccctgttatg
      841 agacagtgaa ggcctggctc caggagaacc tgctagctgt gggcatcttt ggactgtgca
      901 cagcactggt gcagattctg ggcctcacct tcgctatgac catgtactgc caggtggtaa
      961 aggcggacac ctactgtgca taggtctctg tcacggcctc tgcttctctg ccaaaggacc
     1021 tgcccatgag gagatgtcaa acccacttcc catgcaggac ttggtgctcc gctgaatgca
     1081 aggagaagag cttgaggcca cagcatccag gacccatccc tgcacctgag ggactctgct
     1141 tgggtggcag cagagacacc agattagggt tggtgccaaa tggcacccag ggctaagggc
     1201 ctggggaact tttgacactt ttatatccat atatttcttc tagtgttcac acaggatggg
     1261 gtccccagcc ttgcatggat gccaggttgg gggcaggccc agtctgctca aggcccacga
     1321 tgatcttggt gctccaggca ggtcccatga tccacattcc atgacagtgt cgtggatcca
     1381 gatgcatctt aataaagtgt gtgagcagtc aaaaaaaaaa aaaaaaaaaa aaaaa
//
