LOCUS       NM_001419843            1532 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus tetraspanin 32 (Tspan32), mRNA.
ACCESSION   NM_001419843 XM_002728846
VERSION     NM_001419843.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Gartlan,K.H., Belz,G.T., Tarrant,J.M., Minigo,G., Katsara,M.,
            Sheng,K.C., Sofi,M., van Spriel,A.B., Apostolopoulos,V.,
            Plebanski,M., Robb,L. and Wright,M.D.
  TITLE     A complementary role for the tetraspanins CD37 and Tssc6 in
            cellular immunity
  JOURNAL   J Immunol 185 (6), 3158-3166 (2010)
   PUBMED   20709950
REFERENCE   2  (bases 1 to 1532)
  AUTHORS   Goschnick,M.W., Lau,L.M., Wee,J.L., Liu,Y.S., Hogarth,P.M.,
            Robb,L.M., Hickey,M.J., Wright,M.D. and Jackson,D.E.
  TITLE     Impaired 'outside-in' integrin alphaIIbbeta3 signaling and thrombus
            stability in TSSC6-deficient mice
  JOURNAL   Blood 108 (6), 1911-1918 (2006)
   PUBMED   16720835
REFERENCE   3  (bases 1 to 1532)
  AUTHORS   Van Uden,J.H., Tran,C.H., Carson,D.A. and Raz,E.
  TITLE     Type I interferon is required to mount an adaptive response to
            immunostimulatory DNA
  JOURNAL   Eur J Immunol 31 (11), 3281-3290 (2001)
   PUBMED   11745345
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Apr 19, 2023 this sequence version replaced XM_002728846.5.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643292.4743.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN06680412, SAMN06680413
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-109               JAXUCZ010000001.1  207619586-207619694
            110-224             JAXUCZ010000001.1  207620290-207620404
            225-322             JAXUCZ010000001.1  207621252-207621349
            323-397             JAXUCZ010000001.1  207625412-207625486
            398-499             JAXUCZ010000001.1  207629381-207629482
            500-586             JAXUCZ010000001.1  207630116-207630202
            587-670             JAXUCZ010000001.1  207631625-207631708
            671-762             JAXUCZ010000001.1  207632004-207632095
            763-1532            JAXUCZ010000001.1  207633116-207633885
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q41"
     gene            1..1532
                     /gene="Tspan32"
                     /gene_synonym="Phemx"
                     /note="tetraspanin 32"
                     /db_xref="GeneID:365390"
                     /db_xref="RGD:1308721"
     exon            1..109
                     /gene="Tspan32"
                     /gene_synonym="Phemx"
                     /inference="alignment:Splign:2.1.0"
     CDS             44..802
                     /gene="Tspan32"
                     /gene_synonym="Phemx"
                     /note="pan hematopoietic expression"
                     /codon_start=1
                     /product="tetraspanin-32"
                     /protein_id="NP_001406772.1"
                     /db_xref="GeneID:365390"
                     /db_xref="RGD:1308721"
                     /translation="MGHWNRIKIAKCQILITNFFVLLLGLSLATMTVVTHFGDHFTVI
                     GHASLQRNPYETLRYWAFYVGISLAGLLSLGAALSTIATVREAHGLMAAGFLCFALSF
                     CILVQVAFWRFHNPTQVEDAVLDTYDLVYDQAMKSPSSSWWQELAVIQDTFLCCGKKS
                     PFGLLASTGPIMCQGQKAMREDCLQSIRNFLWTHYRIASTLTCTSLALTVYAMMLCAF
                     LWFAIHSYCGLDRRGRYSLTPRSHGCQPQEPSLF"
     exon            110..224
                     /gene="Tspan32"
                     /gene_synonym="Phemx"
                     /inference="alignment:Splign:2.1.0"
     exon            225..322
                     /gene="Tspan32"
                     /gene_synonym="Phemx"
                     /inference="alignment:Splign:2.1.0"
     exon            323..397
                     /gene="Tspan32"
                     /gene_synonym="Phemx"
                     /inference="alignment:Splign:2.1.0"
     exon            398..499
                     /gene="Tspan32"
                     /gene_synonym="Phemx"
                     /inference="alignment:Splign:2.1.0"
     exon            500..586
                     /gene="Tspan32"
                     /gene_synonym="Phemx"
                     /inference="alignment:Splign:2.1.0"
     exon            587..670
                     /gene="Tspan32"
                     /gene_synonym="Phemx"
                     /inference="alignment:Splign:2.1.0"
     exon            671..762
                     /gene="Tspan32"
                     /gene_synonym="Phemx"
                     /inference="alignment:Splign:2.1.0"
     exon            763..1532
                     /gene="Tspan32"
                     /gene_synonym="Phemx"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggaggggag aagagagagc agagagcaga ggacctgagc accatggggc actggaatcg
       61 aatcaagatt gccaaatgcc agatactgat caccaacttc tttgtcttgc tgctgggcct
      121 ctctctggcc accatgacag ttgttactca ctttggagac cactttactg taattggcca
      181 tgcatccttg cagaggaacc cctatgaaac actgcgctat tgggctttct atgtggggat
      241 cagcctagca gggctactga gcctcggagc tgctctgagc accatagcca ctgtgaggga
      301 ggcccatggc ctcatggctg cgggattcct gtgctttgct ctgtcattct gcatcctggt
      361 gcaggtggcc ttctggagat tccacaaccc cacccaggtg gaggatgcag tgttggatac
      421 ctatgacctc gtgtatgatc aggcaatgaa gagcccatct agcagctggt ggcaggagct
      481 ggccgtcatc caggacacgt ttctgtgttg tggtaagaaa tctccttttg ggcttctggc
      541 gagcactgga cccatcatgt gtcagggcca gaaggccatg agagaggact gcctccagag
      601 catcaggaac tttctgtgga cacactaccg tatcgcttcc accctgacct gcaccagcct
      661 ggccctcacg gtatatgcta tgatgctctg tgccttcctc tggtttgcca ttcactccta
      721 ctgtggcttg gatcgaagag gcagatactc cctgacccca cggtcccatg gctgccagcc
      781 ccaggaaccc agcctcttct gatggaccca gggtgagctg gtgcctcaac actcttctga
      841 agcatgagtg tttgctgatg attaggtcta gcaggatgct tgctacctgc ttgcccacag
      901 agatgaagtc tttggccctg agccctccca tgatcctcaa aggagtagat aagctgtgtc
      961 ttgcacattg tggggcaaag gaaggggagc atatcccacc aggtgtgtta gctaatctta
     1021 catagttgtg gtcagacacc taccagaaat aggaaaggtt tattctggct tctgatttca
     1081 gagagactct gatccattac aacagggagg gcacagagga atggctctgt ttatggcagc
     1141 aggaacataa ggtggaagct agatgttgag gtcaactaat ttcctctggg tcatcgtgga
     1201 gaaaaattac tttggcaatg tagtcatgat actgaaatgt gcagaaccac atggtgacag
     1261 ccatgttttg gtaatggcca tggggctgct gatgctccgt agtttaggga ggagaggtca
     1321 ccgtatcttc acctgggatt ccagctaccc ctctctcctg cccagtaact gttagggtct
     1381 tgggaaatgc tggactgtga caagttaact gaaaccagga ctccatgatc cagaatccat
     1441 gaggtgggtg tttaggtgat gaaaaggttg ggtttaccca cactccttat aagtaactct
     1501 tcacccccaa taaactcgtt gattcaagtt aa
//
