LOCUS       NM_001008378            1480 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus tetraspanin 31 (Tspan31), mRNA.
ACCESSION   NM_001008378 XM_343217
VERSION     NM_001008378.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1480)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC086452.1.
            
            On Dec 16, 2004 this sequence version replaced XM_343217.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC086452.1, FQ215742.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760400, SAMEA5760476
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1480
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q22"
     gene            1..1480
                     /gene="Tspan31"
                     /gene_synonym="Sas"
                     /note="tetraspanin 31"
                     /db_xref="GeneID:362890"
                     /db_xref="RGD:1309876"
     exon            1..156
                     /gene="Tspan31"
                     /gene_synonym="Sas"
                     /inference="alignment:Splign:2.1.0"
     CDS             94..726
                     /gene="Tspan31"
                     /gene_synonym="Sas"
                     /note="tspan-31; sarcoma-amplified sequence homolog;
                     sarcoma amplified sequence"
                     /codon_start=1
                     /product="tetraspanin-31"
                     /protein_id="NP_001008379.1"
                     /db_xref="GeneID:362890"
                     /db_xref="RGD:1309876"
                     /translation="MACGGFACSKNALCALNVVYMLVGLLLIGVAAWGKGLGVVSSIH
                     IIGGVIAVGVFLLLIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFGISCSCLAINRN
                     TQADVINASWWVLSNSTRHELERSFDCCGLFNLTTVHLHDDASCSALCKTRSSPCQMC
                     GETFLKHSDKALKILGGVGLFFSFTEILGVWLAMRFRNQKDPRANPSAFL"
     exon            157..324
                     /gene="Tspan31"
                     /gene_synonym="Sas"
                     /inference="alignment:Splign:2.1.0"
     exon            325..405
                     /gene="Tspan31"
                     /gene_synonym="Sas"
                     /inference="alignment:Splign:2.1.0"
     exon            406..537
                     /gene="Tspan31"
                     /gene_synonym="Sas"
                     /inference="alignment:Splign:2.1.0"
     exon            538..651
                     /gene="Tspan31"
                     /gene_synonym="Sas"
                     /inference="alignment:Splign:2.1.0"
     exon            652..1454
                     /gene="Tspan31"
                     /gene_synonym="Sas"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttaaagcgat agacgctgtt ggattcctac aagacggtcc tcagtaccct ccccacaagt
       61 cttgggacca ttcgggtccc cagatctggg gagatggctt gcggcggatt tgcctgttcc
      121 aagaatgcgc tgtgcgctct caacgtggtt tatatgcttg tgggcttatt gctcattggc
      181 gtagctgcct ggggcaaggg cctcggtgtg gtgtccagca ttcacatcat tggaggagtc
      241 attgctgtgg gagtcttcct tctcctcatt gcagtggctg gactggtggg tgccgtgaac
      301 caccatcaag tgctgctttt cttttatatg atcatcctgg gtttggtctt catcttccag
      361 tttggaatct cttgctcatg tctggctatt aacagaaaca cacaggcaga tgtcatcaat
      421 gcttcgtggt gggtcttgag caacagtacc aggcatgaac tggagagaag ttttgactgc
      481 tgtggtttgt ttaaccttac aaccgtgcac ctacatgatg atgcttcctg cagtgcactg
      541 tgcaaaacta ggagctctcc atgccagatg tgtggggaga cattcctaaa acattcagac
      601 aaagctctca agatcctagg aggtgttggg ctcttcttca gtttcacaga gatcctcggt
      661 gtttggctag caatgagatt ccggaatcaa aaagaccctc gagccaatcc tagtgccttt
      721 ctatgagatt tgatctccca gacaggatct ttgcagcctc ggctggtttc tacccagctc
      781 tagccatgga gggccttgaa ctccgcattc tcctgcctca gcctcctgcc agtattgcag
      841 gcatcaccac actcagccag ccttgtgatc cttctgactt ggccttgcct tctcccggct
      901 ttttaaattc ttggaaacct aggatggcca cccccaacag gggtttttgt tttagagaga
      961 aaaaggtccc ttacctcact cctaagaact gatcaagtga tggctacatt tatttatgtc
     1021 tgtgtatttt gatgggaata ttatggaggg ggagaggact ccatttctct gcctaggagg
     1081 gtctagcact cctagaagca caggtggctg atgggagcct ttcataactg ttttccttcc
     1141 cttcaagaac aaaatcagaa caccaaagga aaaccagtta caacccaagg cctcacaagt
     1201 gctgggcaag tatttctacc agtctgtcat cccagcctca cctacaatct cacaggacca
     1261 gtggacttaa actaaagcca ttttgaccaa atattcaaag aaaggatttg aaagatcctc
     1321 tccgatcttg tcagccaaag agctggactg cctgcctagg tccttgcagg gaacttgttt
     1381 catttggttt tttctttttc aaatctccca gtggcaacgc caatcagaaa aacattaaag
     1441 aaaaataaag accaaaaaaa aaaaaaaaaa aaaaaaaaaa
//
