LOCUS       NM_001013244            1943 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus tetraspanin 13 (Tspan13), mRNA.
ACCESSION   NM_001013244 XM_345660
VERSION     NM_001013244.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1943)
  AUTHORS   Mallmann,R.T., Wilmes,T., Lichvarova,L., Buhrer,A., Lohmuller,B.,
            Castonguay,J., Lacinova,L. and Klugbauer,N.
  TITLE     Tetraspanin-13 modulates voltage-gated CaV2.2 Ca2+ channels
  JOURNAL   Sci Rep 3, 1777 (2013)
   PUBMED   23648579
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC089906.1.
            
            On Mar 26, 2005 this sequence version replaced XM_345660.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC089906.1, FQ217050.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN06621351, SAMN16676784
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1943
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q16"
     gene            1..1943
                     /gene="Tspan13"
                     /gene_synonym="Tm4sf13"
                     /note="tetraspanin 13"
                     /db_xref="GeneID:366602"
                     /db_xref="RGD:1311788"
     exon            1..224
                     /gene="Tspan13"
                     /gene_synonym="Tm4sf13"
                     /inference="alignment:Splign:2.1.0"
     CDS             162..776
                     /gene="Tspan13"
                     /gene_synonym="Tm4sf13"
                     /note="tspan-13; transmembrane 4 superfamily member 13"
                     /codon_start=1
                     /product="tetraspanin-13"
                     /protein_id="NP_001013262.1"
                     /db_xref="GeneID:366602"
                     /db_xref="RGD:1311788"
                     /translation="MVCGGFSCSKNCLCALNLLYTLVSLLLIGIAAWGIGFGLISSLR
                     VVGVVIAVGIFLFLIALVGLIGAVKHHQVLLFFYMIILLLVFIVQFSVSCACLALNRE
                     QQGQLLEVGWNNTASARNDIQRNLNCCGFRNYNPNDTCPASCAKSNQKCSSCAPIIGE
                     YAGEVLRFVGGIGLFFSFTEILGVWLTYRYRNQKDPRANPSAFL"
     exon            225..392
                     /gene="Tspan13"
                     /gene_synonym="Tm4sf13"
                     /inference="alignment:Splign:2.1.0"
     exon            393..473
                     /gene="Tspan13"
                     /gene_synonym="Tm4sf13"
                     /inference="alignment:Splign:2.1.0"
     exon            474..587
                     /gene="Tspan13"
                     /gene_synonym="Tm4sf13"
                     /inference="alignment:Splign:2.1.0"
     exon            588..701
                     /gene="Tspan13"
                     /gene_synonym="Tm4sf13"
                     /inference="alignment:Splign:2.1.0"
     exon            702..1916
                     /gene="Tspan13"
                     /gene_synonym="Tm4sf13"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gccgctgcgg gcgcggcact gcagccccga gcctgaaccc cgaaccggag ccctgagccc
       61 aaccccggct acaggcccag aaggccggga tccagcagct actcgcccag cccttcggag
      121 gacgcctcga cccgcaggcg cccgctagcc cacgcgccac gatggtgtgc gggggcttct
      181 cgtgctccaa gaactgcctg tgcgcgctca acctgctata caccctggtc agtctgctgc
      241 tcattggaat tgctgcttgg ggcatcggct ttgggctgat ctccagtctc cgagtggtgg
      301 gcgtggtcat cgctgtgggc atcttcctgt tcctgattgc cttggtgggg ctgattggag
      361 ctgtaaaaca ccatcaggtg ttgctatttt tttatatgat cattctccta ctcgtattta
      421 ttgtccagtt ttcggtatct tgtgcttgtt tagctctgaa tcgggagcaa cagggtcagc
      481 tcctggaggt tggatggaac aatacagcaa gtgctagaaa tgacatccag aggaatttga
      541 actgctgtgg cttccgaaat tataacccaa acgacacctg cccggctagc tgtgctaaaa
      601 gtaaccagaa gtgctcctcg tgtgccccca taatcggaga gtatgctgga gaggttttga
      661 gatttgttgg tggcattggc ctcttcttca gttttacaga gatcctgggt gtttggctga
      721 catacagata ccggaaccag aaagaccctc gcgccaaccc gagcgctttc ctttgacgag
      781 aagacaagga gaggctttcc tgtgatcttg ttctctttct ccaatctcaa gttaaactaa
      841 gttgttcata tgacgaagga aatggtattt gaaaaccaca ttatcaatga gcgagttaaa
      901 tattttactc ttaagtttct ccaaacagtt tgttctttcc attgctgaaa aggcagttga
      961 tgtctccagt gttccctgac cctcagtggt ccctgtaacc ctactgttgt ccgtttctgg
     1021 ctctgtccac tgtggccttt cttagcattt ttacctgctg taatctgtgt atgacacccc
     1081 tgggtagatg atattgtgag cccagatctt catctcaccg ggctaattgt ccagagtgct
     1141 gtgcgggcag cttcacccta gacagttgat ggtttttgaa gccagaaagg aagagactct
     1201 gttgtgttcg gttcattagg agaaatctaa gttcccaatc ctttttgtct tttgggaacg
     1261 ctacattgta gtgaaaagtg ttagcacaga agtaataatt tagttctagt agtctgtcag
     1321 ttacatccat gtattctaga gatagctgtg tctttaggaa aatgaagttc agtttttgat
     1381 ctttttagtc aagggcaaag aaataccatt tgggaaatgt tttgttgtgt aacatttatc
     1441 ttcagctctc aaaatgggat gaatttgagg aagagagagt atatatctac ataatctgac
     1501 attttttttt taaaaaaata ggaagttcaa aaccctatat atgtaaacaa ctttcagtca
     1561 atacattggc ccaggcccat gtaacaaata gatatttgat tatctttaaa aaagtaactt
     1621 tttgtttcaa gacagggttt ctttgtgtag ccttggttgt cctagaacta gctctgtaga
     1681 ccaggctggc cttgaactca cagggatccg cctgcctctg cctcccaagt gctgggatta
     1741 aaggcacgtg ccaccatcac ctgtcaaaaa ataacttttt aataacattt cttggtattg
     1801 tgacagcaag ttgtcatatc caaatatatt tgaatgtact acctcccata agttgagaga
     1861 gaaatgatgt ttgtggctct gtatactaca ttaaaaaata aaagctgaaa accttcaaaa
     1921 aaaaaaaaaa aaaaaaaaaa aaa
//
