LOCUS       XM_039097381            1374 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus thymic stromal lymphopoietin (Tslp),
            mRNA.
ACCESSION   XM_039097381
VERSION     XM_039097381.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 25% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1374
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1374
                     /gene="Tslp"
                     /note="thymic stromal lymphopoietin; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     3 Proteins, and 87% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:688621"
                     /db_xref="RGD:1586479"
     CDS             1..672
                     /gene="Tslp"
                     /codon_start=1
                     /product="thymic stromal lymphopoietin"
                     /protein_id="XP_038953309.1"
                     /db_xref="GeneID:688621"
                     /db_xref="RGD:1586479"
                     /translation="MGAKPNLIGKNRLLSDILVPISNYSCALQQTSLPKRSNVIAVTL
                     KTTCLPVKSIVLGSRGSLCLEGWFQEKQSRTRVSGNIFSLCVSPVLFRYLFILQVVRL
                     ALTYNFSNCNFEMILRIYHATIFRDLLKDLNGILFDQIEDCDSRTACLLKIDHHTFNP
                     VPGCPSLPEKAFALKTKAALINYCPGYSETERNGTLEMTREIRNICLNQTSQILGLWL
                     SCIQS"
ORIGIN      
        1 atgggtgcca agccaaacct tatcgggaaa aacaggttgc tgtctgacat tctggtccct
       61 atcagcaatt actcctgcgc cctgcagcaa accagtctac ccaaaagaag caatgtaatt
      121 gcagtaacct taaagaccac gtgtttacca gtaaagagca tagtcctggg gtccagaggc
      181 tctctgtgct tggagggatg gttccaggag aaacaaagta ggacccgtgt ttcagggaac
      241 attttctcac tgtgtgtctc tccagttctt ttcaggtacc tctttatcct gcaagtggta
      301 cggctggcac taacttacaa cttttctaac tgtaacttcg agatgatttt gagaatatat
      361 catgcaacaa tttttcgtga cctgcttaaa gatttgaatg ggatcttgtt cgaccaaatc
      421 gaggactgtg acagcaggac agcttgtctc ctgaaaatcg accaccatac cttcaatcct
      481 gtccctggct gcccgtcact ccccgagaaa gcgttcgctt tgaaaacgaa agcggccctc
      541 attaactact gcccaggcta ctctgaaact gagagaaatg gtactctgga aatgacacga
      601 gaaatcagaa acatctgcct gaatcaaacc tcacaaattc taggattgtg gctttcctgc
      661 attcaatctt gaagaaaaaa ttagcttttg gattatatta tgaaaatata tatcttgttt
      721 ttagtagata taatactaag ggtgtgacac ttaaaagaac actaatgttt attctttaat
      781 tatagaaggg attcttaact tatttttggc atatcgttgt ttagtgtagg cgctttaaat
      841 ggaaaatgag cattacccct ttaatggaaa taaccgtgct gttaatgatt ggcttcggct
      901 tctgagcagt ctttctcacc tcacctgaga cactttactc tagggcaaac ctaactgtag
      961 taggaagaaa atcaaaagta gaaaaacagt tgaaaccaat gacaggatct atactccatt
     1021 taaaaggcaa gaatttttgt acctgtaatg attcttctaa cattcctacg ctaagatttt
     1081 actaaagaag aaaataacag cagaggaaag tgttcaggca gtcactgcca tgatgaagct
     1141 gtcagaatct gagagctact gctgcaactg atcgtgtagt aaatccagct gtaaagggga
     1201 tcttaaccca ccacagtggg atgcacaggc agatccccaa gggcattgtg cagctgtgag
     1261 atatatattt aaagttgtat ataatgattt tctaatttat tccgtgagca cctttgaaaa
     1321 tatacatgtc gctgtgtaac aaatacactt ctgaataaag taattctcaa gttc
//
