LOCUS       XM_039109066             483 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus thyroid stimulating hormone receptor,
            pseudogene 1 (Tshr-ps1), mRNA.
ACCESSION   XM_039109066
VERSION     XM_039109066.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086022) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..483
                     /gene="Tshr-ps1"
                     /note="thyroid stimulating hormone receptor, pseudogene 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins"
                     /db_xref="GeneID:103692150"
                     /db_xref="RGD:9264819"
     CDS             1..483
                     /gene="Tshr-ps1"
                     /codon_start=1
                     /product="thyrotropin receptor-like"
                     /protein_id="XP_038964994.1"
                     /db_xref="GeneID:103692150"
                     /db_xref="RGD:9264819"
                     /translation="MRTQPCDCHFPRKLIETHLKTIPSLAFSSLPNISRIYLSIDATL
                     HRLEPHSFYNLSKMTHIEIRNTRSLTYIDPDALTELPLLKFLGMFNTGLRIFPDLTKI
                     YFTDVFFILEITDNPYMTSVPENAFQGLCNETLTLKLYNNGFTSMQGHAFNGTKLDAV
                     "
ORIGIN      
        1 atgagaactc aaccgtgtga ctgtcatttc cctaggaagc tcatcgagac tcacctgaag
       61 accattccca gtcttgcctt ttcgagcctg cccaatattt ccaggatcta tctatccata
      121 gatgccactc tgcatcggct ggaaccacat tctttctaca atttgagtaa aatgactcac
      181 atagaaatcc ggaacaccag aagcttaact tacatagacc ctgatgcttt aacagagctc
      241 cccttgctca agtttcttgg aatgttcaat actggactta gaatattccc tgacttgacc
      301 aaaatttatt tcacggatgt attctttata ctagaaatca cagacaaccc ttacatgaca
      361 tcagtccctg aaaacgcatt ccagggacta tgcaatgaaa ccttgacctt gaaactatac
      421 aacaatggat ttacttcaat gcaaggacat gctttcaatg gaacaaagct ggatgctgtg
      481 taa
//
