LOCUS       NM_001107851            1134 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus testis specific, 13 (Tsga13), mRNA.
ACCESSION   NM_001107851
VERSION     NM_001107851.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1134)
  AUTHORS   Hasson SA, Kane LA, Yamano K, Huang CH, Sliter DA, Buehler E, Wang
            C, Heman-Ackah SM, Hessa T, Guha R, Martin SE and Youle RJ.
  TITLE     High-content genome-wide RNAi screens identify regulators of parkin
            upstream of mitophagy
  JOURNAL   Nature 504 (7479), 291-295 (2013)
   PUBMED   24270810
REFERENCE   2  (bases 1 to 1134)
  AUTHORS   Florea L, Di Francesco V, Miller J, Turner R, Yao A, Harris M,
            Walenz B, Mobarry C, Merkulov GV, Charlab R, Dew I, Deng Z, Istrail
            S, Li P and Sutton G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473959.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001065674.1, XM_231582.4.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760389
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q22"
     gene            1..1134
                     /gene="Tsga13"
                     /note="testis specific, 13"
                     /db_xref="GeneID:688848"
                     /db_xref="RGD:1584118"
     exon            1..77
                     /gene="Tsga13"
                     /inference="alignment:Splign:2.1.0"
     exon            78..249
                     /gene="Tsga13"
                     /inference="alignment:Splign:2.1.0"
     CDS             227..1039
                     /gene="Tsga13"
                     /note="testis specific gene A13"
                     /codon_start=1
                     /product="testis-specific gene 13 protein"
                     /protein_id="NP_001101321.1"
                     /db_xref="GeneID:688848"
                     /db_xref="RGD:1584118"
                     /translation="MGPKKNSKLQESGGSKTSIKFEKQLGPDDEEMYDTTAQSKFVLK
                     NLRHYTVHPNMAQYYEPLKPSKLQRFLTQRKKTNSFMVKVTEYDQDMTLLLMTNNPPP
                     YSIGQQENNGAPIYFPPEFQLKETVYRREPNKNDFLPTMSQKKKLKPVLKPIFPMKRI
                     GDPNFKGQQWFRFSTDKDFKIEGRYSEVHALRKQKKMYPNLIFAPVDQRETRKQVSMK
                     SADETPTSQVLWEPLTFSKLLEEKPTRSVPGESCFRYGRAQQWVVKNAAVIK"
     exon            250..319
                     /gene="Tsga13"
                     /inference="alignment:Splign:2.1.0"
     exon            320..391
                     /gene="Tsga13"
                     /inference="alignment:Splign:2.1.0"
     exon            392..598
                     /gene="Tsga13"
                     /inference="alignment:Splign:2.1.0"
     exon            599..741
                     /gene="Tsga13"
                     /inference="alignment:Splign:2.1.0"
     exon            742..869
                     /gene="Tsga13"
                     /inference="alignment:Splign:2.1.0"
     exon            870..1134
                     /gene="Tsga13"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagaattgct gccttcgaca cagaaagttt ccctgttaag gacttgtcgc ttctgagatt
       61 tccttatgtc tttaaaggat caagattgag tctgggcaca cggtgtgtgc taagaaaaga
      121 ataatttatt gacttgaagc ctcgtaggtc gtgaatcact tagaggcact gagtttaggc
      181 ctcagtgata cttgctgcca gttggtccag ttctcaggga acagccatgg gcccaaagaa
      241 aaattccaag cttcaagaaa gtggaggatc aaagacctct attaaatttg aaaaacaact
      301 aggtccagat gatgaagaga tgtatgacac gactgcacag tcgaaatttg tcctaaagaa
      361 cctcagacac tacacagtcc atccaaatat ggcccaatac tatgagcctt tgaagcccag
      421 taaactgcag agattcctga ctcaaaggaa gaagaccaat agtttcatgg taaaggtgac
      481 agagtatgat caggacatga cgttactgct catgaccaac aacccgccac cctactccat
      541 cggccagcag gaaaataatg gtgctcccat atactttccc ccagagttcc agttaaagga
      601 aactgtctat cgccgcgaac ccaacaaaaa tgacttcctt cccacaatgt ctcagaaaaa
      661 gaagttaaaa ccagttctga agccaatctt ccctatgaaa cggataggtg accctaactt
      721 caagggacaa caatggttta ggttttctac tgacaaggat ttcaagattg aagggaggta
      781 ttctgaagtc cacgctttaa ggaaacagaa aaaaatgtat cctaatctca tctttgcccc
      841 agtcgaccag agagagacaa ggaaacaagt ttccatgaag tcggcggatg aaacaccaac
      901 ttcgcaagtg ctttgggaac cattgacatt ttcaaagctc ctagaagaga agcctacaag
      961 aagtgtgcca ggggagagct gctttcgcta tggaagggcc cagcagtggg tggtcaaaaa
     1021 tgcggctgtc attaagtgaa gacaaatcct ttaagcccct ctctgcgctc tccaagaact
     1081 gaggggacct ggagaagtca ccaaccaaat aaagttccat gtttgtagcc tcag
//
