LOCUS       NM_001393709            3582 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus testis specific 10 (Tsga10), mRNA.
ACCESSION   NM_001393709
VERSION     NM_001393709.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3582)
  AUTHORS   Behnam,B., Modarressi,M.H., Conti,V., Taylor,K.E., Puliti,A. and
            Wolfe,J.
  TITLE     Expression of Tsga10 sperm tail protein in embryogenesis and neural
            development: from cilium to cell division
  JOURNAL   Biochem Biophys Res Commun 344 (4), 1102-1110 (2006)
   PUBMED   16643851
REFERENCE   2  (bases 1 to 3582)
  AUTHORS   Modarressi,M.H., Behnam,B., Cheng,M., Taylor,K.E., Wolfe,J. and van
            der Hoorn,F.A.
  TITLE     Tsga10 encodes a 65-kilodalton protein that is processed to the
            27-kilodalton fibrous sheath protein
  JOURNAL   Biol Reprod 70 (3), 608-615 (2004)
   PUBMED   14585816
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.49915.1,
                                           SRR26360181.281015.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on computational evidence
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-55                JAXUCZ010000009.1  47594007-47594061   c
            56-184              JAXUCZ010000009.1  47574332-47574460   c
            185-400             JAXUCZ010000009.1  47564950-47565165   c
            401-466             JAXUCZ010000009.1  47558742-47558807   c
            467-624             JAXUCZ010000009.1  47557407-47557564   c
            625-783             JAXUCZ010000009.1  47556620-47556778   c
            784-954             JAXUCZ010000009.1  47554274-47554444   c
            955-1032            JAXUCZ010000009.1  47554110-47554187   c
            1033-1184           JAXUCZ010000009.1  47553070-47553221   c
            1185-1300           JAXUCZ010000009.1  47536295-47536410   c
            1301-1455           JAXUCZ010000009.1  47532388-47532542   c
            1456-1511           JAXUCZ010000009.1  47527945-47528000   c
            1512-1680           JAXUCZ010000009.1  47524479-47524647   c
            1681-1791           JAXUCZ010000009.1  47522071-47522181   c
            1792-1977           JAXUCZ010000009.1  47519586-47519771   c
            1978-2187           JAXUCZ010000009.1  47504708-47504917   c
            2188-2390           JAXUCZ010000009.1  47495585-47495787   c
            2391-2495           JAXUCZ010000009.1  47493115-47493219   c
            2496-2642           JAXUCZ010000009.1  47492584-47492730   c
            2643-3582           JAXUCZ010000009.1  47487007-47487946   c
FEATURES             Location/Qualifiers
     source          1..3582
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q21"
     gene            1..3582
                     /gene="Tsga10"
                     /note="testis specific 10"
                     /db_xref="GeneID:252923"
                     /db_xref="RGD:621142"
     exon            1..55
                     /gene="Tsga10"
                     /inference="alignment:Splign:2.1.0"
     exon            56..184
                     /gene="Tsga10"
                     /inference="alignment:Splign:2.1.0"
     exon            185..400
                     /gene="Tsga10"
                     /inference="alignment:Splign:2.1.0"
     exon            401..466
                     /gene="Tsga10"
                     /inference="alignment:Splign:2.1.0"
     exon            467..624
                     /gene="Tsga10"
                     /inference="alignment:Splign:2.1.0"
     CDS             574..2667
                     /gene="Tsga10"
                     /note="cp431"
                     /codon_start=1
                     /product="testis-specific gene 10 protein"
                     /protein_id="NP_001380638.1"
                     /db_xref="GeneID:252923"
                     /db_xref="RGD:621142"
                     /translation="MMRNRSKSPRRPSPTSRAANCDVDLLKSTARDREELKCMLEKYE
                     RHLAEIQGNVKVLTSERDKTFLLYEQAQEEIARLRREMMKSCKSPKSTTAHAILRRVE
                     TERDVAFTDLRRMTTERDSLRERLKIAQETAFNEKAHLEQRIEELECTVHNLDDERME
                     QMSNMTLMKETITTVEKEMKSLARKAMDTESELGRQKAENNSLRLLYENTEKDLSDTQ
                     RHLAKKKYELQLTQEKIMCLDEKIDNFTRQNIAQREEISILGATLNDLAKEKECLQTC
                     LDKKSENIASLGESLAMKEKTISGMKNIIAEMEQASRQSTEALIMCEQDISRMRRQLD
                     ETNDELGQIARERDILAHENDNLQEQFAKVKQENQALSKKLNDTHNELSDIKQKVQDT
                     NLEVNKLKNILKSEESENRQIMEQLRKANEDAENWENKARQLEAENNTLKLELITAEA
                     EGNRLKEKVDALNREVEQHLNAERSYKSQIATLHKSLVKMEEELQKVQFEKVSALADL
                     SSTRELCIKLDSSKELLNRQLVAKDQEIEMMENELDSARSEIELLRSQMTNERISMQN
                     LEALLVANRDKEYQSQIALQEKESEIQLLKEHLCLAENKMAIQSRDVAQFRNVVTQLE
                     ADLDITKRQLGTERFERERAVQELRRQNYSSNAYHLGSMKPNTKCHSPERAHHRSPDR
                     GLDRSLEENLCYRDF"
     exon            625..783
                     /gene="Tsga10"
                     /inference="alignment:Splign:2.1.0"
     exon            784..954
                     /gene="Tsga10"
                     /inference="alignment:Splign:2.1.0"
     exon            955..1032
                     /gene="Tsga10"
                     /inference="alignment:Splign:2.1.0"
     exon            1033..1184
                     /gene="Tsga10"
                     /inference="alignment:Splign:2.1.0"
     exon            1185..1300
                     /gene="Tsga10"
                     /inference="alignment:Splign:2.1.0"
     exon            1301..1455
                     /gene="Tsga10"
                     /inference="alignment:Splign:2.1.0"
     exon            1456..1511
                     /gene="Tsga10"
                     /inference="alignment:Splign:2.1.0"
     exon            1512..1680
                     /gene="Tsga10"
                     /inference="alignment:Splign:2.1.0"
     exon            1681..1791
                     /gene="Tsga10"
                     /inference="alignment:Splign:2.1.0"
     exon            1792..1977
                     /gene="Tsga10"
                     /inference="alignment:Splign:2.1.0"
     exon            1978..2187
                     /gene="Tsga10"
                     /inference="alignment:Splign:2.1.0"
     exon            2188..2390
                     /gene="Tsga10"
                     /inference="alignment:Splign:2.1.0"
     exon            2391..2495
                     /gene="Tsga10"
                     /inference="alignment:Splign:2.1.0"
     exon            2496..2642
                     /gene="Tsga10"
                     /inference="alignment:Splign:2.1.0"
     exon            2643..3582
                     /gene="Tsga10"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gccggacgga agtggagcgg aggcgccggg gaggtggaag gagagccccg ctcaggttac
       61 caccaaagaa catcagtttg gtctcggggc tccagtttct gaagctggaa gaaaccagaa
      121 tactttccaa ctagaacaag aagggagaac ccaagataga gtcatctcta cactgaaatt
      181 acagattgaa gatctcaaac agacaaatca tgacctggaa gaatgtgtta ggaaactctt
      241 ggatagtaaa gaggtggtaa gcactcaagt agatgatcta accaaccaca atgagcatct
      301 ttgtaaagag ttgcttaaac ttgaccaact agcagagcaa ttgcaaaaag aaaagaattt
      361 tgtggtggac actgccgaca aggaacttga agaagcaaag attgaactca tttgccagca
      421 aaataacata acagtattag aagatacaat taaaaagctt aagtcaagac tgaaaaagta
      481 caaaatacat ctccttctag acttgattcc tttgtcaaga ctttagaagc agacagagat
      541 tattataagg ctgaagctca gaatttgaga aaaatgatga gaaatagatc taagagtcca
      601 agacgcccat caccaacttc tcgggccgcc aactgtgatg tagaccttct gaagtcaact
      661 gcaagagacc gtgaagagct caagtgtatg ctggaaaaat atgaacgcca tttggcagaa
      721 atccagggta atgtcaaggt tctcacatct gagagagaca agaccttcct cctttatgag
      781 caggcacagg aagaaattgc tcgacttcga cgagaaatga tgaaaagctg caagtctcct
      841 aaatcaacta cagcacatgc tattcttcgc cgcgtcgaga cggaaagaga tgtcgccttc
      901 actgatttac gaagaatgac caccgagcga gatagtctga gggaaaggct caagattgct
      961 caagagacgg cattcaacga gaaggctcac ttggaacagc ggatagagga gctggagtgc
     1021 acagttcaca acctggatga tgagcgcatg gaacagatgt caaacatgac tttgatgaag
     1081 gaaaccataa ccactgtgga aaaagaaatg aaatccttag caagaaaggc aatggacacc
     1141 gagagtgagc ttggcagaca gaaagcagag aataattctt tgagactttt atatgaaaat
     1201 acagaaaaag atctttctga tactcagcga catcttgcta agaaaaaata tgaactacag
     1261 cttactcagg agaaaattat gtgcttggat gaaaaaattg ataattttac gaggcaaaat
     1321 attgcacagc gagaagaaat cagcatcctt ggtgcaaccc tcaatgacct ggctaaagag
     1381 aaggagtgcc tgcaaacatg tttggataaa aagtctgaga acattgcatc ccttggagag
     1441 agtttggcaa tgaaagaaaa gaccatttca ggcatgaaga atatcattgc tgagatggaa
     1501 caggcatcaa gacagtctac ggaagcccta attatgtgcg aacaagatat ttccagaatg
     1561 cgccggcagc tggatgaaac gaatgacgag ctggggcaga tcgccaggga gagagatatc
     1621 ttggctcatg agaatgacaa tcttcaagaa cagtttgcca aagtcaaaca agaaaaccag
     1681 gcgctgtcca aaaaactgaa tgacactcat aatgagctca gcgacataaa gcagaaggtc
     1741 caggacacga acctggaggt taacaagctg aagaacatat taaagtctga ggaatctgag
     1801 aaccggcaaa taatggaaca actccgaaaa gccaacgaag atgctgaaaa ctgggaaaat
     1861 aaggcccgcc aactagaggc agaaaacaac acactcaaac tggagcttat caccgcggaa
     1921 gccgagggca acagactgaa ggaaaaagtc gatgccctta acagagaagt tgagcaacac
     1981 ttaaacgcag agcgctctta caaatcccag attgcaactt tacacaagtc tcttgtgaag
     2041 atggaggagg agcttcagaa ggttcagttt gaaaaggtgt ctgcgctcgc agatttgtct
     2101 tccacaaggg aactctgcat taaactcgac tcaagcaaag aacttcttaa ccgacagctg
     2161 gttgccaaag atcaggaaat agagatgatg gagaacgagc tggattcagc acgctctgaa
     2221 atagaactgc tccggagtca gatgacaaac gagaggatct ccatgcagaa tcttgaggcc
     2281 ctgctggtgg ccaaccgaga caaagagtac cagtctcaga tagctctgca ggagaaggag
     2341 tctgagatcc agctgctgaa ggagcacctc tgcctggccg agaacaaaat ggccatccag
     2401 agtagagatg tggcacagtt cagaaacgtt gtaacacagt tagaagcaga tttggacatt
     2461 acaaaaagac aactagggac agaacgattt gaaagggaaa gggctgtcca agaacttcgc
     2521 cgccagaatt actcaagcaa tgcttatcat ttgggttcaa tgaagccaaa tacaaagtgt
     2581 cactcaccag agcgagctca ccatcgatct cctgaccgag gcctcgaccg atcattggaa
     2641 gagaatcttt gctatagaga tttctgacat gtgaaaagat tctccacagc cttgggaagg
     2701 tcaaagatac aaatggattt tttgctatgt gattgcattt atcttttgaa tgcttgacag
     2761 ggttaaatgt atttattaac tttgtgcctc tgagtctgtt ctccagtgcc ctaccacaga
     2821 aatctgggat gattgatgta tgcaaacgaa atgcatatgg ttctttctat ccacacagtg
     2881 atagtgagtg taaaatctgc ttacttcact actgagcact gttttgttaa ctgtccggag
     2941 taaataaaga agcttaaaaa agagggaaaa gtgtttttac aaaactgatt tcctttcctt
     3001 ccttgctatc tcaaatgact ggttggttac attttttttc tttgtgatgt atattctcat
     3061 ggctcgggaa gctgggccaa gatgggcaca gcccagcagc actggcctgg gacccagagt
     3121 cacattttgg aaccaacctg ccatagttcc catgccacag tctgccttca aagtacgagc
     3181 atgccacgct ctggtgcacg ctgttgcagc tcgcagccca ggcgccaagc attttcacaa
     3241 tagcatttgc tcttactgtt gttagaaagg taggtgatgg tctatctatc cgaatgtaag
     3301 attttttaaa aatatgtatt ctcaataagt tttcttcaaa acattcgagt accacaatga
     3361 acttaattgc cattttattt attttatttt attttatttt tgcctgtggc agctgtctgt
     3421 aatctagagt gacaagatgt ttcctttgcc tcacctgcat ctcttacgtt ttttgtgtcc
     3481 gtaggccgat ttactgttga tattagagcc tgaatgctac tgtattttac tgatataagt
     3541 tatttgtatt cttacatttt aataaaaaag caagccctgt ca
//
