LOCUS       NP_001103046             525 aa            linear   ROD 26-FEB-2024
DEFINITION  tRNA-splicing endonuclease subunit Sen54 [Rattus norvegicus].
ACCESSION   NP_001103046 XP_001074043
VERSION     NP_001103046.1
DBSOURCE    REFSEQ: accession NM_001109576.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 525)
  AUTHORS   Yoshihisa T.
  TITLE     Handling tRNA introns, archaeal way and eukaryotic way
  JOURNAL   Front Genet 5, 213 (2014)
   PUBMED   25071838
  REMARK    Review article
            Publication Status: Online-Only
REFERENCE   2  (residues 1 to 525)
  AUTHORS   Weitzer S and Martinez J.
  TITLE     The human RNA kinase hClp1 is active on 3' transfer RNA exons and
            short interfering RNAs
  JOURNAL   Nature 447 (7141), 222-226 (2007)
   PUBMED   17495927
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473948.1.
            
            On Oct 4, 2007 this sequence version replaced XP_001074043.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132262 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Rattus norvegicus"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.1"
     Protein         1..525
                     /product="tRNA-splicing endonuclease subunit Sen54"
                     /note="tRNA splicing endonuclease 54 homolog; TSEN54 tRNA
                     splicing endonuclease subunit"
                     /calculated_mol_wt=59045
     Region          63..130
                     /region_name="tRNA_int_end_N2"
                     /note="tRNA-splicing endonuclease subunit sen54 N-term;
                     pfam12928"
                     /db_xref="CDD:463754"
     Region          <116..>169
                     /region_name="tRNA_int_end_N2"
                     /note="tRNA-splicing endonuclease subunit sen54 N-term;
                     cl46333"
                     /db_xref="CDD:480673"
     CDS             1..525
                     /gene="Tsen54"
                     /coded_by="NM_001109576.1:60..1637"
                     /db_xref="GeneID:690308"
                     /db_xref="RGD:1597379"
ORIGIN      
        1 mepesepasv evpagrvlsa selraarsrs qklpqrshgp kdflpdgsea qaerlrlcrq
       61 elwqllaeer verlgslvaa ewrpeegfve ltspagkfwq tmgyseegrq rlhpeealyl
      121 lecgsiqlfy qdlplsiqea yqllltedtl sflqyqvfsh lkrlgyvvrr fqlssvvspy
      181 erqlnldgya qcledgsgkr krssscrsvn kkakalqnsl ppvsladssp pacdqsspyp
      241 eekprdsspe qgselpmqfl gspepcpdpg redagcdqes dkiengakgt pkprwnferi
      301 sfpnmasdsr htllpapape llpvnvigrg tdaeswcqkl nqrreklsrr dreqqaevrq
      361 fredvnadpe vqgcstwqey kellrrrqmq rsqprpphlw gqsvtpllnp dtadspaavl
      421 qrisvlqtth ladggyrlle ksggleisfd vyqadavatf rknspgkpyv rmcisgfdep
      481 vpdlcslkrl tyqsgdvpli falvdhgdis fysfrdftlp qdlgh
//
