LOCUS       NM_001130061            3136 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus tRNA methyltransferase 44 (Trmt44), mRNA.
ACCESSION   NM_001130061 XM_001063887 XM_223529
VERSION     NM_001130061.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3136)
  AUTHORS   Florea L, Di Francesco V, Miller J, Turner R, Yao A, Harris M,
            Walenz B, Mobarry C, Merkulov GV, Charlab R, Dew I, Deng Z, Istrail
            S, Li P and Sutton G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473963.1.
            
            On or before Jul 16, 2008 this sequence version replaced
            XM_001063887.1, XM_223529.4.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132274,
                              SAMD00132275 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3136
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14q21"
     gene            1..3136
                     /gene="Trmt44"
                     /gene_synonym="Mettl19; RGD1308380"
                     /note="tRNA methyltransferase 44"
                     /db_xref="GeneID:305443"
                     /db_xref="RGD:1308380"
     exon            1..473
                     /gene="Trmt44"
                     /gene_synonym="Mettl19; RGD1308380"
                     /inference="alignment:Splign:2.1.0"
     CDS             17..2134
                     /gene="Trmt44"
                     /gene_synonym="Mettl19; RGD1308380"
                     /EC_number="2.1.1.211"
                     /note="methyltransferase like 19; tRNA methyltransferase
                     44 homolog"
                     /codon_start=1
                     /product="probable tRNA (uracil-O(2)-)-methyltransferase"
                     /protein_id="NP_001123533.1"
                     /db_xref="GeneID:305443"
                     /db_xref="RGD:1308380"
                     /translation="MEELRRVPLDDPDSLLPGGFWAAVTVWLERPQVANKRLCGARIE
                     ARGRTLRPSAQAECGPRQGQGHGLEREPGQGSRADREGTAPAADLDLLWNRVSQSLVH
                     SNPEILTFYGPSLGSPPEAAQELDLVLRTVIPKASPHFPFTEPKKELVVQDVSSGSVT
                     FLPLEEDNEENLEVKMSNVYQLRLHHSEGEWFISVLIFCPERWHSDGVVYPKPTWLAE
                     ELLSKLARWAVENRKSEFKSTLSLVSVLRYGRMYQELKEKYRDMVKVWPEVTDPEKFV
                     YEDVAIATYLLILWEEERAEKGITTKQSFVDLGCGNGLLVHILSNEGHPGRGIDVRRR
                     KIWDMYGPQTQLEEGSITPSDKTLFPGVDWLIGNHSDELTPWIPVIAARSSYTCRFFV
                     LPCCFFDFVGRYRRRQSKKTQYREYLDFVLEVGLSCGFHVQEDCLRIPSTKRVCLIGK
                     SRTYLPSAEVWMDEQRTRYLHSRQGLPQSLPGGGHAPSVPQIAAHDDDAGHQDSHRTF
                     DAGAECMPEGLAAERGTGAPATGLWVPGFCPREKAERVRNCAALPRDFIDQVVLQVAN
                     LLLDGKRFNTGNSEAGSLKTWNGGGSLSLAEVAAELNSETLQQLKRECGGLQTLLRNS
                     HQVFEVLNGRVHIRDWRRELQREKPPEGKRSLSAEVFKTRICWFFTHHPDGCVLPAAC
                     CPFAHGLEELRPSQTLKKQRQAP"
     exon            474..588
                     /gene="Trmt44"
                     /gene_synonym="Mettl19; RGD1308380"
                     /inference="alignment:Splign:2.1.0"
     exon            589..808
                     /gene="Trmt44"
                     /gene_synonym="Mettl19; RGD1308380"
                     /inference="alignment:Splign:2.1.0"
     exon            809..877
                     /gene="Trmt44"
                     /gene_synonym="Mettl19; RGD1308380"
                     /inference="alignment:Splign:2.1.0"
     exon            878..985
                     /gene="Trmt44"
                     /gene_synonym="Mettl19; RGD1308380"
                     /inference="alignment:Splign:2.1.0"
     exon            986..1057
                     /gene="Trmt44"
                     /gene_synonym="Mettl19; RGD1308380"
                     /inference="alignment:Splign:2.1.0"
     exon            1058..1164
                     /gene="Trmt44"
                     /gene_synonym="Mettl19; RGD1308380"
                     /inference="alignment:Splign:2.1.0"
     exon            1165..1348
                     /gene="Trmt44"
                     /gene_synonym="Mettl19; RGD1308380"
                     /inference="alignment:Splign:2.1.0"
     exon            1349..1787
                     /gene="Trmt44"
                     /gene_synonym="Mettl19; RGD1308380"
                     /inference="alignment:Splign:2.1.0"
     exon            1788..1904
                     /gene="Trmt44"
                     /gene_synonym="Mettl19; RGD1308380"
                     /inference="alignment:Splign:2.1.0"
     exon            1905..3136
                     /gene="Trmt44"
                     /gene_synonym="Mettl19; RGD1308380"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgccgagagc gcagatatgg aggagctccg tagagtgccg ctagacgacc ctgattctct
       61 gctacccgga ggtttctggg ccgccgttac cgtgtggctg gagaggccac aggtggccaa
      121 caagaggctg tgtggcgccc gcatagaagc ccgtgggaga actttgcggc ccagtgccca
      181 ggcggagtgt ggaccgcggc agggacaggg gcacgggctg gagagggaac cgggacaggg
      241 atctagggcg gaccgcgaag gcaccgctcc cgcggctgac ctggacttgc tatggaaccg
      301 agtctcccaa agcctcgtcc actccaatcc ggaaatactg accttctatg gcccctcgtt
      361 gggttctcct cctgaagccg cgcaggagct cgacctggtt ctcagaaccg tcatcccgaa
      421 agcgagccct cacttcccct ttacagagcc gaagaaagaa ctggtggtgc aagatgtttc
      481 cagtgggagt gtcacctttt tgcccttgga agaagataat gaggagaatt tggaggttaa
      541 aatgagcaat gtgtatcagc tccgtctcca tcacagcgaa ggagaatggt tcatatctgt
      601 tttaattttc tgtccagaga ggtggcattc ggatggtgtt gtctacccca agcctacctg
      661 gcttgcagaa gaactgctgt ccaagctggc caggtgggca gtggagaaca ggaagagcga
      721 gtttaaaagc acactttccc tggtctccgt cctgcgctat ggcaggatgt accaggagct
      781 caaagagaag tacagagaca tggtaaaggt ttggcctgaa gtaaccgatc ctgaaaagtt
      841 tgtatatgaa gatgtggcca tcgctacata cctgttgatc ctatgggaag aggagagggc
      901 tgagaagggc atcaccacca agcagtcttt cgtggacctg gggtgtggaa atggccttct
      961 ggtccacatc ctgagcaacg aggggcatcc aggcagaggg attgatgtcc gaagaagaaa
     1021 aatctgggac atgtatggac cccaaactca gctggaggaa ggttccatca ctccaagtga
     1081 caagacactg ttccctggtg ttgactggct gattggtaac cattctgatg agctcacccc
     1141 gtggatccct gtcattgcag ccaggtcttc ctacacctgt cggttcttcg tcctgccctg
     1201 ctgttttttt gactttgtag ggcgataccg gcggcggcaa agcaagaaga cacagtaccg
     1261 agagtacctg gacttcgtgc tggaggtggg gctctcctgt ggcttccacg tacaggagga
     1321 ctgcctcagg attccgtcta ccaagcgggt ctgcctcatt gggaaatcca gaacatacct
     1381 gccttctgca gaggtctgga tggatgagca gagaacacga tacctgcaca gcagacaggg
     1441 ccttccacag agcctgcctg gtgggggaca tgcaccttct gtaccccaga ttgctgctca
     1501 cgatgacgat gctggtcacc aggacagtca caggaccttt gatgctgggg ctgagtgcat
     1561 gccagagggc ctggctgctg agcgaggaac aggagcccca gccacaggac tctgggtgcc
     1621 tgggttctgc cctagagaaa aggctgagcg tgtgaggaat tgtgctgctc tccctcgaga
     1681 cttcattgac caagtggttt tacaggtggc aaacttgttg ttagatggaa agaggttcaa
     1741 cacgggaaac tctgaagccg ggagtctgaa gacctggaat ggaggaggga gcctttcctt
     1801 ggcagaagtg gctgcagaac taaactcaga aacgctgcag cagctgaagc gggagtgtgg
     1861 aggcctacag accctgctca ggaatagcca tcaggtgttt gaagttctga atgggcgagt
     1921 tcacatccgt gactggcggc gggagctgca gagggaaaag cctccagaag gcaagaggag
     1981 cctgtctgca gaggtgttca agactcgaat ctgctggttc ttcactcacc accctgatgg
     2041 ttgtgtactg cctgctgcct gttgcccctt tgcgcatggg ctggaagagc tgcgcccgtc
     2101 tcagaccttg aagaagcaga ggcaggctcc ctgagtcacc tcttcagtgt tctctagctg
     2161 ttgggttctg tggctctcct gcctgtctcc cttatcctga tgacatcatg ttgggactgg
     2221 gttggcttca gtctgacctg ttggtatgca gaaccactgt cagtcactgg tacatgcggg
     2281 ctgtggactg ctctgatgcc agagccaccg tgtcagcctc tgcaaacatg accttctcat
     2341 tcccgggact gtgtacccca ggtctcctct gccgaggagc tccctgctca agggatccct
     2401 gtaagcagag gcacagggct ttctgaggtc cttattggag tcctacagct tccagagtca
     2461 cccctggcca cctgtgttcg aggcatgact cagtgagcat tgcctccacc ttatccttct
     2521 ctttagaaca ttctccccag aggtgtggga tggtttttcc tttcaggaaa catttccgtt
     2581 tgttttcagt tttaaacaaa aaggaccgct cactgcatct cagctgaatg tcctggggac
     2641 cagtctctga aaccccccat gtggtagaag tatttgtggt gaccaacctg gtgtcatctg
     2701 agtggtgaga ataaagtcgt ttattctgaa gagccaaggg ctctagagca tcccggagca
     2761 gggcagctac catgggctct caggcccagc tggtaagaac ccgcagagct tgctcctgcc
     2821 tcttcccttg acactttcgt agccccagct cccagagcag tgatggccgt ctaccactct
     2881 ctcggatgga ctaggttgtg tgtcctcagg aactcagaga ggagcagtct ctgtcctctc
     2941 attagcccta cctgtaattg ccttttctcc caggtccaca ggggcctaga agctatagag
     3001 ctcctttcca gcttggcctc ttgtctgaaa ggcagcgttt ggtctcaggc cctgtaggtg
     3061 cttggaaatc taatgattcc caagaattta atgaggcaag gttcccaggg gtattgggtc
     3121 tggctttcag gttttt
//
