LOCUS       NM_001122976            1655 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus tRNA methyltransferase 12 (Trmt12), mRNA.
ACCESSION   NM_001122976 XM_001068980 XM_235337
VERSION     NM_001122976.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1655)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC097456.1.
            
            On Apr 6, 2008 this sequence version replaced NM_001122976.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC097456.1, BC079303.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1655
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q33"
     gene            1..1655
                     /gene="Trmt12"
                     /gene_synonym="RGD1307127"
                     /note="tRNA methyltransferase 12"
                     /db_xref="GeneID:314999"
                     /db_xref="RGD:1307127"
     exon            1..1627
                     /gene="Trmt12"
                     /gene_synonym="RGD1307127"
                     /inference="alignment:Splign:2.1.0"
     CDS             79..1392
                     /gene="Trmt12"
                     /gene_synonym="RGD1307127"
                     /EC_number="2.5.1.114"
                     /note="tRNA-yW-synthesizing protein 2;
                     alpha-amino-alpha-carboxypropyl transferase TYW2;
                     tRNA(Phe) (4-demethylwyosine(37)-C(7))
                     aminocarboxypropyltransferase"
                     /codon_start=1
                     /product="tRNA wybutosine-synthesizing protein 2 homolog"
                     /protein_id="NP_001116448.1"
                     /db_xref="GeneID:314999"
                     /db_xref="RGD:1307127"
                     /translation="MERECEKSVVVAVVTEPRFTQRYRDYLEKQKLLDRQYRVEKLRD
                     GTVALPVLAETLSEHHLQELKNRVAPGSTCKLTQLLDPLPSKKARVCSPAQRLCLEVR
                     RWVEDRGVTWSTELEADLPRSWQRHGDLMLLSEDCFQATQWKRLEPELWETVASALGV
                     QRLAKRGRVLPDGTRTPTVTLLLGDHGWVEHVDNGIRYKFDVTQCMFSFGNITEKLRV
                     ASLSCAGEVLVDLYAGIGYFTLPFLVHAGAAFVHACEWNPHAVVALRKNLEINGVADR
                     CQIHFGDNRKLKLSNTADRVNLGLIPSSEEGWPIACQVLRKDVGGILHIHQNVESFSG
                     KNPQPPGSSNMEKKHWPHPQKITTDKQGNRTTGSCMGEMSSASKPEWQRWAESAESQI
                     ASLLHQVHGKPWRTRILHVHPVKSYAPHVDHIVLDLECRPCPLVG"
ORIGIN      
        1 cggcggactt gtcaagagag accagcctca caggagaatc tcgctgatgg actccgaagg
       61 gatgcaaacg ctagcgacat ggagagagaa tgtgagaagt ctgtagttgt cgcagttgtg
      121 actgagcctc ggtttaccca gagatacaga gactatctcg agaagcagaa actcttggat
      181 agacagtacc gtgtggaaaa gttgcgggat ggcacggtgg cgctaccggt gctggcagaa
      241 accctgtctg aacatcatct gcaggagctg aagaatcgcg tggcccccgg cagcacctgt
      301 aagctgacgc agctcctgga tcctcttcct tctaaaaagg cccgggtttg ttcacctgcc
      361 caaagactgt gtcttgaggt gaggcgttgg gtagaggacc gcggagtgac gtggtccact
      421 gaattggagg cagatttgcc ccggtcttgg caacggcatg gtgacctaat gctgcttagt
      481 gaagactgtt tccaagccac gcagtggaaa aggctggaac cagaactctg ggagactgtt
      541 gcctcagccc ttggagttca gcgtttggca aaacgagggc gggtgctacc tgatggtact
      601 cgaactccga cagtgactct gctgctcggt gaccatggct gggtagagca tgtagataat
      661 ggcatccggt ataagtttga tgtgacacag tgcatgttct ccttcggaaa catcactgag
      721 aaacttcgag tggcctcact ctcctgtgct ggagaagtgc tggtggatct ctatgcaggg
      781 attggttatt ttacgttgcc cttcctagtt catgctggcg ccgctttcgt ccatgcttgt
      841 gaatggaatc ctcatgcagt agttgctcta agaaagaatt tggagatcaa tggagtggca
      901 gaccggtgcc aaatacattt tggggacaac aggaaactga aactctcaaa cactgcagat
      961 agggtgaacc tggggctcat tcccagttct gaagaaggct ggcccattgc ctgccaagtg
     1021 ctgcgaaagg atgttggggg tattctgcat atccaccaaa atgtggaatc tttctcggga
     1081 aagaatccac agccacctgg aagcagtaac atggaaaaga agcattggcc tcatccccag
     1141 aaaattacca ctgataaaca gggaaataga actactggaa gttgcatggg ggaaatgtca
     1201 tcagccagca aaccagagtg gcaaagatgg gcagaatctg cagaaagtca gatcgcctct
     1261 cttcttcatc aagtacatgg gaaaccatgg aggacacgaa tcctacatgt ccacccagtg
     1321 aaatcttacg ccccccacgt ggatcacata gtcctagatc tggaatgccg cccctgccct
     1381 ctagttggct agaagggtag atttagtgac acaatagagc cagataatgg cacttagtgc
     1441 ttcagttagg gctgcattct cacccttctg ttttctggtg acctttaaag gtgatttatg
     1501 gtctgaaaat gaactccaga ctgatccaaa gaattttgtg ttctattgat cacattgaga
     1561 atgtattaaa gtatcagagg aaaacactat gactcattaa aataagattc atctgtacag
     1621 acatgaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//
