LOCUS       NM_001105946             889 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus telomerase RNA component interacting RNase
            (Trir), mRNA.
ACCESSION   NM_001105946 XM_001070796 XM_213841
VERSION     NM_001105946.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 889)
  AUTHORS   Xie,J., Chen,Z., Zhang,X., Chen,H. and Guan,W.
  TITLE     Identification of an RNase that preferentially cleaves A/G
            nucleotides
  JOURNAL   Sci Rep 7, 45207 (2017)
   PUBMED   28322335
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473972.1.
            
            On or before Oct 3, 2007 this sequence version replaced
            XM_213841.3, XM_001070796.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ210991.1, DV216009.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..889
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q11"
     gene            1..889
                     /gene="Trir"
                     /gene_synonym="RGD1564093"
                     /note="telomerase RNA component interacting RNase"
                     /db_xref="GeneID:288920"
                     /db_xref="RGD:1564093"
     exon            1..402
                     /gene="Trir"
                     /gene_synonym="RGD1564093"
                     /inference="alignment:Splign:2.1.0"
     CDS             67..588
                     /gene="Trir"
                     /gene_synonym="RGD1564093"
                     /note="uncharacterized protein C19orf43 homolog"
                     /codon_start=1
                     /product="telomerase RNA component interacting RNase"
                     /protein_id="NP_001099416.1"
                     /db_xref="GeneID:288920"
                     /db_xref="RGD:1564093"
                     /translation="MAARGRRAEPPGREAPGPAGSGRSRWAESGPGTSPESGDDEVSG
                     SSPVSSGVNLFANDGSFLELFKRKMEEEQRQRQEEPPPGPQRPDQPASAAAGPGNQKR
                     KGGPGPTFSFVGKRRGGNKLALKTGIVAKKQKTEDEVLTSKGDAWAKYMAEVKKYKAH
                     QCGDDDKTRPLVK"
     exon            403..480
                     /gene="Trir"
                     /gene_synonym="RGD1564093"
                     /inference="alignment:Splign:2.1.0"
     exon            481..889
                     /gene="Trir"
                     /gene_synonym="RGD1564093"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtcccgcgcc aagcgcgcgg tgtgagagcc tttcccgaag tcctttgcgc ggcatctggc
       61 cacaaaatgg ctgcccgagg gagacgggcg gagcctccgg gtcgggaggc gcccggcccg
      121 gcgggcagcg gcaggagccg atgggctgag tcggggccgg gaacatcacc cgagagtggg
      181 gatgacgagg tgtcgggctc aagtccggtg tccagcggtg tgaacttgtt tgccaacgat
      241 ggcagcttcc tggagctgtt caagcggaag atggaggagg agcagcggca gcggcaggag
      301 gagccacccc cgggcccgca gcgacctgat caaccggcct ccgccgcagc gggcccaggg
      361 aatcagaaga ggaagggcgg cccaggcccc acgttcagct tcgtgggcaa gcgcagaggc
      421 gggaacaaac tagccctcaa gacgggaata gtagccaaga agcagaagac ggaggatgag
      481 gtattaacaa gtaaaggtga cgcgtgggcc aagtacatgg cagaagtgaa aaagtacaaa
      541 gcccaccagt gcggtgatga tgataaaact cggcccctgg tgaaatgacc ccccgggtgc
      601 tcactacctg ggactccgag atgtacataa tatttaatgc ggtaacggca gcagccttcc
      661 tggaggactg atacacagaa ggaaacccag gcgcttcccg tggccgcaga ccattctcca
      721 ggactctttt ttaccttgag cacttgcctc ctgagactta ctagaccagc ggtttactgt
      781 gccctttctt cccatcacct tgctctctct ggctctgtct gtctcttctt gctgtctctc
      841 cttttagcag tcacttctga gaagtaaaga acctgactta gtgctggaa
//
