LOCUS       NM_001171802            1546 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus triple QxxK/R motif containing (Triqk), mRNA.
ACCESSION   NM_001171802
VERSION     NM_001171802.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1546)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1546)
  AUTHORS   Bonaldo,M.F., Lennon,G. and Soares,M.B.
  TITLE     Normalization and subtraction: two approaches to facilitate gene
            discovery
  JOURNAL   Genome Res 6 (9), 791-806 (1996)
   PUBMED   8889548
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CB805415.1, BC089993.1 and CA507504.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC089993.1, CO399939.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132283, SAMD00132291
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-30                CB805415.1         1-30
            31-1520             BC089993.1         1-1490
            1521-1546           CA507504.1         693-718
FEATURES             Location/Qualifiers
     source          1..1546
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q13"
     gene            1..1546
                     /gene="Triqk"
                     /note="triple QxxK/R motif containing"
                     /db_xref="GeneID:500413"
                     /db_xref="RGD:1561260"
     exon            1..117
                     /gene="Triqk"
                     /inference="alignment:Splign:2.1.0"
     exon            118..273
                     /gene="Triqk"
                     /inference="alignment:Splign:2.1.0"
     exon            274..355
                     /gene="Triqk"
                     /inference="alignment:Splign:2.1.0"
     CDS             295..555
                     /gene="Triqk"
                     /note="protein TRIQK; triple repetitive-sequence of QXXK/R
                     protein homolog"
                     /codon_start=1
                     /product="triple QxxK/R motif-containing protein"
                     /protein_id="NP_001165273.1"
                     /db_xref="GeneID:500413"
                     /db_xref="RGD:1561260"
                     /translation="MGRKDSSTTKLPVDQYRKQIGKQDYKKTKPILRATKLKAEAKKT
                     AIGIKEVGLMLAAILALLLAFYAFFYLRLSTNIDADLDPDED"
     exon            356..441
                     /gene="Triqk"
                     /inference="alignment:Splign:2.1.0"
     exon            442..1532
                     /gene="Triqk"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cctggagtag gggtgtgcgg ctcgtcgtcc cgcccctgct tctgagtgac agcagcgtgg
       61 acagctgccc acccggccgg acccgcagtt gggccgccct cgctgggcaa tgctgagtaa
      121 gagaaatcaa ccaagagtgt gatttttggc aactggagtt ggatttgcca ggaacgcagc
      181 cgagcttctg agactgtgct tccggaaaca tctctctttt ttttggccgc tttccagagt
      241 tccaacttgg cagcctcaag gacacagcgt aagcaggtat tttggagatc aaagatgggt
      301 agaaaggact cttccactac aaaacttcct gttgatcagt acagaaagca aattggtaaa
      361 caagattata aaaaaaccaa acctattcta cgagcaacca aactaaaagc agaagcgaag
      421 aaaacagcga tcggcataaa ggaggttggc ctcatgcttg cagctatact ggccctctta
      481 ctggctttct atgctttctt ttacctccga ctgtccacga atatcgacgc tgatctggac
      541 ccagatgaag actagctgag caggaatcag aaaaggaaaa gaactaagtc tgatatgagc
      601 atctctgggg acaaatacgt tgcaatttcc aacactagaa cagttcgaaa atttgcttct
      661 tggtactgtc agtcagtttg cagaattatc tttgtgctta atggcatagg gtatcagaaa
      721 aaagacttta cccagcaatc caggatcatg tatctatttg atactttata aatctctctg
      781 ccctggcaga tatcctcttc agggtaccgt ttaacaagat ggaaacattt ttttttcaga
      841 tttctttcca atttacatgt acaactccat cggttacaag tcactaaacc tattatatcc
      901 tatgtatatt gtgagaaaat tatatattgc catttgaaga agcatactca aaattatatt
      961 cagaatccaa gaaggaacag aaagtgatag gaaatttcta atttacaaag aagcatgctt
     1021 tctttgcaga catattttat gtcattaggg agactatctg cacatatatc tacagtaatc
     1081 ttttccttcc tgccaactgt tcgtgcacat gtgctgcgtc agaaatggca cctggatgac
     1141 agaagctcaa agagtcacat atgtccctaa agtggagttc ctcgtctcct gggctgcctg
     1201 aactggtgta aatagaaagt tcagctgatc ttgattttaa ttaacttatt acaccattaa
     1261 tataaagttg ggattctata ttaattatgt tgttctggct gcctgcagta tcagtttgcc
     1321 cctcatttag ggagctgtgt aacaatctgc catttaatcg tgcagggttt tctacgctgc
     1381 agagttagca ggggcgtacg tacatcgaat tattttattg gctcgtctct taaatttgag
     1441 cattacaaag ttttttatcg cattttgtct cttgtgaatt aattaagact ctgtagagta
     1501 aaataaacaa tagaaaaata tgtcacattt taaaaaaaaa aaaaaa
//
