LOCUS       NM_001013160            1632 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus tripartite motif-containing 69 (Trim69), mRNA.
ACCESSION   NM_001013160 XM_230524
VERSION     NM_001013160.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1632)
  AUTHORS   Han,Y., Li,R., Gao,J., Miao,S. and Wang,L.
  TITLE     Characterisation of human RING finger protein TRIM69, a novel
            testis E3 ubiquitin ligase and its subcellular localisation
  JOURNAL   Biochem Biophys Res Commun 429 (1-2), 6-11 (2012)
   PUBMED   23131556
REFERENCE   2  (bases 1 to 1632)
  AUTHORS   Ebstein,F., Lange,N., Urban,S., Seifert,U., Kruger,E. and
            Kloetzel,P.M.
  TITLE     Maturation of human dendritic cells is accompanied by functional
            remodelling of the ubiquitin-proteasome system
  JOURNAL   Int J Biochem Cell Biol 41 (5), 1205-1215 (2009)
   PUBMED   19028597
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC091171.1.
            
            On Apr 20, 2005 this sequence version replaced XM_230524.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC091171.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1632
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q35"
     gene            1..1632
                     /gene="Trim69"
                     /gene_synonym="Rnf36"
                     /note="tripartite motif-containing 69"
                     /db_xref="GeneID:311373"
                     /db_xref="RGD:1305074"
     exon            1..60
                     /gene="Trim69"
                     /gene_synonym="Rnf36"
                     /inference="alignment:Splign:2.1.0"
     CDS             55..1554
                     /gene="Trim69"
                     /gene_synonym="Rnf36"
                     /EC_number="2.3.2.27"
                     /note="tripartite motif-containing protein 69; ring finger
                     protein 36; RING-type E3 ubiquitin transferase TRIM69"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase TRIM69"
                     /protein_id="NP_001013178.1"
                     /db_xref="GeneID:311373"
                     /db_xref="RGD:1305074"
                     /translation="MEVSSRPPSNFDPGNYVEVSDPSTHLPSKVVIQDITTELHCPLC
                     NDWFRDPLMLTCGHNFCQACIQNYWKMQAKETFCPECKMLCQYSNCTFNLVLEKLVEK
                     IKRLPLLKGHPQCPEHGENLKLFSKPDGKMICFQCKDARLSMGQSKDFLQISEAVRFF
                     TEELAIYQSQLQTTLKELQSLRTMQKDAIAAYKDNKIQLQQNLSLEFLKLHQFLHNKE
                     KDILNDLRDEGKVLNEEMDANLNQIQEQCLLAKDMLANIQARMEQQNSFDFLTDITKL
                     LENMEKGMKTLVPRQLISKKLSLGRFKGPIQYTIWREMQSILSPGPSQLTLDPKTAHP
                     NLVLSNSRTSVCHGDVKQVMPDDPERFDSSVAVLGSKGFTSGKWYWEIEVAKKTKWTI
                     GIVRESIIRKGSCPLTPEQGFWLLRLRNQTDLKALDLPSCSLNLGDLRRVGVYLDYEG
                     GQVSFYNATNMTHLYTFTSVFLEKLFPYLCPCLNDGGENKEPLHIVHPQ"
     exon            61..537
                     /gene="Trim69"
                     /gene_synonym="Rnf36"
                     /inference="alignment:Splign:2.1.0"
     exon            538..633
                     /gene="Trim69"
                     /gene_synonym="Rnf36"
                     /inference="alignment:Splign:2.1.0"
     exon            634..867
                     /gene="Trim69"
                     /gene_synonym="Rnf36"
                     /inference="alignment:Splign:2.1.0"
     exon            868..890
                     /gene="Trim69"
                     /gene_synonym="Rnf36"
                     /inference="alignment:Splign:2.1.0"
     exon            891..1015
                     /gene="Trim69"
                     /gene_synonym="Rnf36"
                     /inference="alignment:Splign:2.1.0"
     exon            1016..1607
                     /gene="Trim69"
                     /gene_synonym="Rnf36"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagcgaagcc aagttgcctg actctgcccc ctggtggcct gatgacccag cttcatggag
       61 gtatcttcta ggcccccctc caactttgat ccaggcaact atgttgaagt gagtgatccg
      121 agcacccact taccctccaa agtggtgata caggatatta ccacagagct gcactgcccg
      181 ctgtgtaacg actggttccg agacccgctg atgctcacct gcggccacaa cttctgtcaa
      241 gcctgtattc aaaactactg gaagatgcag gcgaaggaga cgttctgccc cgagtgtaag
      301 atgctgtgtc agtacagcaa ctgcacgttc aacctggtgc tggagaagct ggtggagaag
      361 attaagaggc tacccctgct caagggccat ccccagtgcc cagagcacgg cgagaacctg
      421 aaactgttca gtaagccaga cgggaaaatg atctgctttc agtgcaagga tgcccggctg
      481 tccatgggcc agtctaagga tttcctgcaa atctctgaag ccgtccgttt ctttacggag
      541 gagcttgcta tctatcagag ccaacttcag acaaccctga aggagcttca gtctctcaga
      601 acaatgcaaa aagatgctat tgctgcttac aaggacaaca agatacaact gcaacaaaac
      661 ctttccttgg agtttctaaa gctgcatcag tttctgcaca acaaagaaaa ggacattctc
      721 aatgatctcc gggatgaggg gaaagtcttg aatgaggaga tggatgcgaa tctgaaccag
      781 attcaggagc agtgtctcct tgccaaagac atgctggcga acattcaggc acggatggaa
      841 cagcagaact ccttcgactt cctcacagac atcacaaagc tcctagagaa catggagaaa
      901 ggaatgaaga cacttgtacc cagacagctt atctccaaaa agctgagcct aggtcgcttc
      961 aaaggtccta tccagtatac catctggagg gaaatgcagt ccattctctc tccaggccca
     1021 tctcaactaa ctctggatcc taaaacagct catccaaatc tggtgctatc caatagccgg
     1081 accagtgtgt gccacggtga tgttaaacag gtaatgcctg atgacccaga gaggtttgat
     1141 tcaagtgtgg ctgtgctagg ctcaaaaggc ttcacctctg ggaaatggta ctgggaaata
     1201 gaagtggcaa agaagacaaa atggacgatt ggaatcgtca gagagtctat cattcggaag
     1261 gggagctgcc ctctgactcc agagcaagga ttctggcttc taagactaag gaaccaaacg
     1321 gatctaaagg ccctggatct gccctcatgc agtctgaacc taggtgatct cagaagggtg
     1381 ggtgtgtacc tggattatga gggagggcag gtgtccttct acaatgctac gaacatgacc
     1441 catctttaca ccttcactag tgttttcctg gagaaacttt tcccctactt gtgcccctgc
     1501 cttaatgacg gtggggagaa taaagagcca ttgcacatcg tacatccaca gtgattaagt
     1561 tatactattg tataaattca gggcgttatt aaagtattga aatagttaaa aaaaaaaaaa
     1621 aaaaaaaaaa aa
//
