LOCUS       NM_001135715            2764 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus tripartite motif-containing 67 (Trim67), mRNA.
ACCESSION   NM_001135715 XM_226563
VERSION     NM_001135715.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2764)
  AUTHORS   Yaguchi,H., Okumura,F., Takahashi,H., Kano,T., Kameda,H.,
            Uchigashima,M., Tanaka,S., Watanabe,M., Sasaki,H. and Hatakeyama,S.
  TITLE     TRIM67 protein negatively regulates Ras activity through
            degradation of 80K-H and induces neuritogenesis
  JOURNAL   J Biol Chem 287 (15), 12050-12059 (2012)
   PUBMED   22337885
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000019.1.
            
            On Oct 8, 2008 this sequence version replaced XM_226563.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1462              JAXUCZ010000019.1  69661777-69663238
            1463-1558           JAXUCZ010000019.1  69683456-69683551
            1559-1681           JAXUCZ010000019.1  69685341-69685463
            1682-1792           JAXUCZ010000019.1  69686728-69686838
            1793-1946           JAXUCZ010000019.1  69688188-69688341
            1947-2092           JAXUCZ010000019.1  69690826-69690971
            2093-2231           JAXUCZ010000019.1  69692280-69692418
            2232-2535           JAXUCZ010000019.1  69693455-69693758
            2536-2698           JAXUCZ010000019.1  69695999-69696161
            2699-2764           JAXUCZ010000019.1  69697739-69697804
FEATURES             Location/Qualifiers
     source          1..2764
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q12"
     gene            1..2764
                     /gene="Trim67"
                     /gene_synonym="RGD1560667"
                     /note="tripartite motif-containing 67"
                     /db_xref="GeneID:307938"
                     /db_xref="RGD:1560667"
     exon            1..1462
                     /gene="Trim67"
                     /gene_synonym="RGD1560667"
                     /inference="alignment:Splign:2.1.0"
     CDS             452..2764
                     /gene="Trim67"
                     /gene_synonym="RGD1560667"
                     /codon_start=1
                     /product="tripartite motif-containing protein 67"
                     /protein_id="NP_001129187.1"
                     /db_xref="GeneID:307938"
                     /db_xref="RGD:1560667"
                     /translation="MEEELKCPVCGSLFREPIILPCSHNVCLPCARTIAVQTPDGEQH
                     LPPPLLLSRGAAAAAAAPPPDQDAAAGATCGGAGASTAGGLGGGAAGGGDHADKLSLY
                     SETDSGYGSYTPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSLCSSSSSITCPQCH
                     RSASLDHRGLRGFQRNRLLEGIVQRYQQGRGVAAGASAAPAVAICQLCDRTPPEPAAT
                     LCEQCDVLYCATCQLKCHPSRGPFAKHRLVQPPPPPAPPEATSASVGTSTASSAGGCR
                     SPGGAGAPVPRKFPTCPEHEMENYSMYCVSCRSPVCYMCLEEGRHGKHEVKPLGATWK
                     QHKAQLSQALNGVSDKAKEAKEFLVQLKNILQQIQENGLDYEACLVAQCDALVDALTR
                     QKAKLLTKVTKEREQKLKMVWDQINHCTLKLRQSTGLMEYCLEVIKEDDPSGFLQISD
                     ALIKRVQTSQEQWVKGALEPKVSAEFDLTLDSEPLLQAIHQLDFVQMKLPPVPLLQLE
                     KCCTRNNSATLAWRTPPFTHSPADGYILELDDGDGGQFREVYVGKETLCTIDGLHFNS
                     TYNARVKAFNSSGVGPYSKTVVLQTSDVAWFTFDPNSGHRDIILSNDNQTATCSSYDD
                     RVVLGTAAFSKGAHYWELHVDRYDNHPDPAFGVARASVVKDMMLGKDDKAWAMYVDNN
                     RSWFMHCNSHTNRTEGGVCKGATVGVLLDLNKHTLTFFINGQQQGPTAFSHVDGVFMP
                     ALSLNRNVQVTLHTGLEVPTNLGRPKLSGN"
     exon            1463..1558
                     /gene="Trim67"
                     /gene_synonym="RGD1560667"
                     /inference="alignment:Splign:2.1.0"
     exon            1559..1681
                     /gene="Trim67"
                     /gene_synonym="RGD1560667"
                     /inference="alignment:Splign:2.1.0"
     exon            1682..1792
                     /gene="Trim67"
                     /gene_synonym="RGD1560667"
                     /inference="alignment:Splign:2.1.0"
     exon            1793..1946
                     /gene="Trim67"
                     /gene_synonym="RGD1560667"
                     /inference="alignment:Splign:2.1.0"
     exon            1947..2092
                     /gene="Trim67"
                     /gene_synonym="RGD1560667"
                     /inference="alignment:Splign:2.1.0"
     exon            2093..2231
                     /gene="Trim67"
                     /gene_synonym="RGD1560667"
                     /inference="alignment:Splign:2.1.0"
     exon            2232..2535
                     /gene="Trim67"
                     /gene_synonym="RGD1560667"
                     /inference="alignment:Splign:2.1.0"
     exon            2536..2698
                     /gene="Trim67"
                     /gene_synonym="RGD1560667"
                     /inference="alignment:Splign:2.1.0"
     exon            2699..2764
                     /gene="Trim67"
                     /gene_synonym="RGD1560667"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggggcgggg cgctcgcaga aggaagactc ggggcagcgg cgctgcggag cccggctcag
       61 tagccttgct ggctcacagc agcgagtcac tggtccttcg tagagtggag gcacgaggta
      121 cccctgacgg cgctgctgct gcctattcac cacctggaca acctcggagg ccactgcgag
      181 ggctgctggc caccttcata cggccgcctc tggtgaggga gcctcgccct caggaggtga
      241 ggacccctcc tttctctggc ggccaagcgt cttagggcgg tggcctgagg acagagaggg
      301 ggcgtgccac cctcgggtga agacagcatg cccgtgtaat acccccgcct cctgactcaa
      361 gagcgctgac atcgcctgcc cagctgcgct tgtcttcgga gctttgacca tccttggctg
      421 gtcccgagcg gctctggccg cgggcgcggc gatggaggag gagctgaagt gcccagtgtg
      481 cggatccctg ttccgggagc ccatcatcct gccctgttct cacaatgtct gcttgccgtg
      541 cgcccgcacc atcgcggttc agaccccgga cggcgagcag cacctgcccc cgccgctcct
      601 tctttcgcgg ggtgccgccg ccgccgccgc cgcgccccct ccggatcagg atgcagcggc
      661 cggcgcgacc tgcggaggcg ccggagctag tacagccgga ggcctgggcg gcggggcggc
      721 cggtggcgga gaccacgcgg acaagctgag cttgtatagc gagactgaca gcggctatgg
      781 ctcctacacc cccagcctca agtcccccaa tggagtccgc gtgctgccca tggtgcctgc
      841 gcctccgggt tcatctgccg ccgcggcccg aggcgccgcc tgctcctcgc tctgctcgtc
      901 ctccagctcc atcacctgcc cgcagtgcca ccgcagcgcc tccctggatc accgcggcct
      961 gcgaggcttc cagcgcaacc ggctactgga gggcatcgtg cagcggtacc agcagggccg
     1021 tggggttgct gcgggggcat ctgcagcccc ggcggtggcc atctgccagc tgtgcgaccg
     1081 caccccaccg gagccggcag ccactctctg cgagcaatgc gacgtgctct attgcgccac
     1141 ctgccagctc aagtgccacc cgtcccgggg ccccttcgct aagcatcggc tagttcagcc
     1201 gccgccgccg cccgcacccc cagaggctac ctctgcttca gtcggtactt ccaccgcctc
     1261 cagcgcagga ggatgcagga gcccaggggg tgccggggcc cccgtgcctc gaaagttccc
     1321 cacgtgcccg gagcacgaga tggagaacta cagcatgtac tgcgtgagct gtcggagccc
     1381 ggtgtgctac atgtgcctag aggaaggcag gcatggcaag cacgaggtga agccgctggg
     1441 ggcaacgtgg aaacagcaca aggcccagct gtctcaggcc ttaaacgggg tttcagacaa
     1501 ggccaaagag gcgaaggagt tcctggttca gctcaagaac atactgcagc agatccagga
     1561 aaatggactg gactatgaag cctgcctggt ggcccagtgt gacgccctgg tggacgccct
     1621 gactcggcag aaagccaagc tgctcaccaa ggtcaccaag gagagggaac agaagctgaa
     1681 gatggtttgg gaccagatca accactgcac tctgaagctg cgccagtcca ctggcctgat
     1741 ggagtactgc ctggaggtga tcaaggagga cgacccctct gggttcctgc agatctcaga
     1801 cgccctgatc aagcgtgtgc agacctcaca ggagcagtgg gtcaaaggtg ccctggagcc
     1861 caaagtgtct gcggagttcg acctgaccct ggacagcgag ccgctgctgc aagccatcca
     1921 ccagctggat ttcgtccaga tgaaattgcc acctgtaccc ctgctgcagc tggagaagtg
     1981 ctgcacccgt aataacagcg ccaccctggc ctggaggacc ccgcccttca cccacagccc
     2041 tgctgatggc tacatcctgg agctggatga tggcgacgga gggcagttcc gggaagtgta
     2101 cgtcggcaag gagaccctgt gcaccatcga cgggctccac tttaacagca cctacaatgc
     2161 cagagtgaaa gccttcaact cctctggtgt tgggccctac agcaagactg tggtcctgca
     2221 gacctctgac gtggcctggt tcactttcga ccccaactct ggccatcggg acatcatctt
     2281 atctaacgac aaccagacag ccacctgtag cagctatgac gaccgggtgg tgctaggcac
     2341 agctgcattc tccaaaggtg cgcactactg ggagctgcac gtcgaccggt acgacaacca
     2401 cccagaccca gccttcgggg tggccagggc cagcgtggtc aaggacatga tgctgggtaa
     2461 agacgacaag gcctgggcca tgtacgtgga caacaaccgc agctggttca tgcactgcaa
     2521 ctcccacacc aacaggaccg aaggcggtgt atgcaagggg gccactgtgg gcgtgctgct
     2581 ggacctgaac aagcacactc tgaccttctt catcaacggg caacaacagg gccccacagc
     2641 cttcagccac gtggatgggg tcttcatgcc tgccctcagc ctcaaccgaa acgtgcaggt
     2701 caccctgcac acaggactgg aggtgccaac aaacctagga cggccaaagc tgtcaggcaa
     2761 ctag
//
