LOCUS       XM_001059150            4106 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus triggering receptor expressed on
            myeloid cells-like 2 (Treml2), transcript variant X1, mRNA.
ACCESSION   XM_001059150
VERSION     XM_001059150.7
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_001059150.8.
            
            On Jan 21, 2021 this sequence version replaced XM_001059150.6.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4106
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4106
                     /gene="Treml2"
                     /note="triggering receptor expressed on myeloid cells-like
                     2; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 ESTs, 4 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 86 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:680844"
                     /db_xref="RGD:1587039"
     CDS             644..1636
                     /gene="Treml2"
                     /codon_start=1
                     /product="trem-like transcript 2 protein isoform X1"
                     /protein_id="XP_001059150.1"
                     /db_xref="GeneID:680844"
                     /db_xref="RGD:1587039"
                     /translation="MAPWPLTFLLFLLLLLWLQGCDSGSSSEKLYRKVQRREGETLSV
                     QCSYKNRRNLVEAKSWCKVKRKKCEHSFTRSWVRGPSYSMRDDTKAKVVRITMEALRV
                     QDSGRYWCMRNTAGNLYPLVGFQLEVYPALTTERNVPPTHLTNTLKDGFANTPMDEFV
                     TTSQVHMSDTGDPFTTNVTVFSSGLHTLASGTTAPTPVTRYSFADTSGTITETERSTE
                     SQPATVSPSHTRPFLADSVTTSTMTRHQSSSLSTTGTCHQLTPNRSQETHRPVMVVVL
                     TFLPAPMLLVVAYGFWKKRHMGRYNLDSNYAKSWLHLPEGPETLWKPACSKITQ"
ORIGIN      
        1 tgctcagtgc tgcctaagcc tgcagaacaa ggggagggag gggctgtgaa ggccgggtga
       61 tttgagagga ggtgggggat gggaaggttt acagcagggc aagaagcctg ggaaccttgg
      121 agcagtggaa ggctagagca agctgctgga ctaaagacct tccttgtgaa ggagtgtcaa
      181 ggcctgccag acagcacctg ctcctgaatc tcagaaccca gaagatctca taaagtctct
      241 acagaatgct ccagaaacct ccccaccaat tccctgggtg gacctgctgc tttggaagag
      301 gagacagccc agatggacca ggttttctgt agagaatcac agaggttgtg gggttctgga
      361 gttttctctg gcccaggggc cccaagacag ggtggagcag ccacacctgc ctgaagttct
      421 gaggaagagg gcggaaacag acagctcccg ccctcacttt ctctccccac aattgtgata
      481 ggctctactg ggtattgtgt gcctgccgca ctggctcact tccccaaata ggcagcagtg
      541 ttttttagag cctggcctca aaccttggta ggtcaggtgg tatgcctggg aacagtgtgg
      601 gtcctgacct tagattcccg ggtgacgttg acattgcaac tggatggcgc catggcctct
      661 tacgttcctg ttgttcctgc tgctgctact atggctacag ggctgtgact caggttcctc
      721 cagtgagaaa ctgtacagga aagtgcaacg tcgtgaaggg gagactctgt ctgtgcagtg
      781 ctcctacaag aaccgccgga acctcgtcga ggccaagtct tggtgcaaag tcaagaggaa
      841 gaagtgcgag cacagcttca cccggagctg ggtgaggggt ccgagctact ctatgcggga
      901 tgataccaag gccaaagtag tccgcatcac catggaggct ctcagagtcc aggactccgg
      961 gcgatattgg tgtatgcgga acacggctgg taatctctac cccttggtgg gtttccagct
     1021 ggaagtgtat ccagccctca caacggagag aaacgttcct cccacacatc ttaccaatac
     1081 cctcaaggat ggatttgcta acactcccat ggatgaattt gtcacaacca gccaagtcca
     1141 catgtcagac actggtgacc ctttcacaac taatgtgacg gtgttctcat ctggactcca
     1201 caccttggcc tcagggacca cggcgccaac ccctgtgaca cgctacagtt tcgccgatac
     1261 cagcggtact attacagaga ctgagaggag cacagagtcc cagccggcaa ctgtgtctcc
     1321 tagccataca agacccttct tggctgattc agtaaccacc tccaccatga ccagacacca
     1381 gagtagcagt ttgtctacca cggggacgtg ccaccagtta acccccaaca gatcccagga
     1441 gactcacaga cctgtgatgg tggtggtgct gacatttctt ccagcaccta tgctgctggt
     1501 cgtggcctat gggttttgga agaagagaca catgggaaga tacaacttgg acagcaacta
     1561 tgctaaatcc tggctacacc ttcctgaagg accagagaca ctctggaagc ctgcttgctc
     1621 taagataact cagtgagctc ggaatctgtt tccagtgggc tcagaaggct gaaagaggac
     1681 caaagacgag gcaatggccc tggggcagga ggacagtgga gctaccttcc ctttaccatg
     1741 gtcactatgt cctcagctcc ctctgttcac ttcaaacacc tcttacgttt ggagacaaga
     1801 atcaggtctc aggagacccc cccggagcag ccagtgtttc tagagtcctg ttctggatga
     1861 gaagaaacaa agactaagac ctgggccaca gaagaattgg tagcagagct gatcaagacc
     1921 acatgtcttc tgatgttccc tgactgtgac tgctggtccc ttctgacctg ggagcctaca
     1981 ggtcacactt gtttctactt gtttcctgcc tgccatccct ttcaggacca tgacagtctt
     2041 cagctacaag ggccatcctc tctctcccaa gatcaaggca aagcctgggt ttccccactc
     2101 gagttcctgc tccatgtttc aacgatgagc tcatggggga gactgagggc agagactcaa
     2161 ccatgggtgt ttagcctcat ctagagggca ccattctcaa gacactgggg ttggccatgg
     2221 actaaagcaa ggccacttct gagaaaagag ctcatggagc tgccctgctt aaaacagcag
     2281 gagagataga agtggagcag gaaagtgaca aatcagattc caggacagaa agataggaag
     2341 acacatggac acatgggtgc atggacacac agacacacag acacacacac acacacacac
     2401 acacacacac acacacacac aaagacacac acatacgcgc gcgcgcgcgc gcgcacacac
     2461 acacacacac ccacccatgc acagtgtgtg tgtgcggtgg tggggagagg ggttggggtg
     2521 ggggaggaga agagagaaga gagcccaaat ggctcagact tgccctctat ttagatcatt
     2581 ggtccagagt agagcagggc tgcgggctgt gggctgaact gccccgtagc agggatgctc
     2641 acttgtccat ggagcataga aaggtccctg gagccaagcg aaacatctac actctcagcc
     2701 ctgagtcagg gacatcctga cagcaaacat cacccttagg tgggtgacac agctgggggt
     2761 gtgctccagg atggctttga ggtgagagga agggccgaag gtgtaaagtc aggagacaga
     2821 aagggatacg cacaaacgca cgcatgcacg cacgcacgca cacctctgac tagcaaacat
     2881 ctgtatagag ccaccaccct agtgggtaac aaggaaggat taactcacac tgcctctaaa
     2941 gtcccacccc tattctggtc ctgaacctcc attgtccctt catagtccct gacagccatt
     3001 tcatgaacag gtgatagaga ggtcgggcac aaggaccagt ggtgcccgtg tgaccctgac
     3061 caagccacta accctgtctg gacctcggtt ccctctccta tgaaagggga caataattcc
     3121 tgcctcaaaa gactgactgg agacacaatg actgacataa gcactatgtg agctgcaagc
     3181 gtctcctgga gatgcttccc tgaagttctt tcctgtcctg atgctcatta ggcacagttg
     3241 agtgttcctc ctgctgctat gactaacact ctctgacaag gggctgcaaa gacagccctt
     3301 gcttaacatg ctcatggctc ctgccagggc ccagggtcaa tttcctggga actcattccg
     3361 taactccagt tccagggcat tgtgatgtcc ctttctggcc tccttgggca cctcatacac
     3421 acggtgcata taaaccatta caggtacaca gtatacacat ataaaccatt acaggtacat
     3481 acacatacac atataaacca ttacaggtac acatgtatac acatataaac cattacaggt
     3541 acacatatat acacatacaa ttacaggtac acacatatac acaaataaac caatacaagt
     3601 acacacatgt acacatataa accattacag gtacacacat gtacacatat aaaccattac
     3661 aggtacacac gcgtacacat ataaatcact acaggtacac atgtatacac atataaatga
     3721 ttacagctat gctgtggata gccctggtgc tgtttgtatt ttgatgctaa ttccacttcc
     3781 caggaggggc tgcctgggat gaggagtgaa tcacatactc aggtgacttc ctgtgaacct
     3841 tcccctaatg aataaagatt tctaccaacc aatcactggg tgaggagtag gcgggacttc
     3901 cgtgtcagag aggagaagag gagaggcaag aaaaggtgtc ttgcttttgg acagggagag
     3961 cttggaagac aggagctaac aagaggcccc tggtttagat ggccaatctg ccaggatttg
     4021 ccaccagagg agttatactt agaatggttt acaaattagg atgttagttg ctgtgcccag
     4081 cgattgtgtt acctgttatt tctgaa
//
