LOCUS       NM_001192001            1250 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus triggering receptor expressed on myeloid
            cells-like 1 (Treml1), transcript variant 1, mRNA.
ACCESSION   NM_001192001 XM_576511
VERSION     NM_001192001.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1250)
  AUTHORS   Washington,A.V., Schubert,R.L., Quigley,L., Disipio,T., Feltz,R.,
            Cho,E.H. and McVicar,D.W.
  TITLE     A TREM family member, TLT-1, is found exclusively in the
            alpha-granules of megakaryocytes and platelets
  JOURNAL   Blood 104 (4), 1042-1047 (2004)
   PUBMED   15100151
REFERENCE   2  (bases 1 to 1250)
  AUTHORS   Barrow,A.D., Astoul,E., Floto,A., Brooke,G., Relou,I.A.,
            Jennings,N.S., Smith,K.G., Ouwehand,W., Farndale,R.W.,
            Alexander,D.R. and Trowsdale,J.
  TITLE     Cutting edge: TREM-like transcript-1, a platelet immunoreceptor
            tyrosine-based inhibition motif encoding costimulatory
            immunoreceptor that enhances, rather than inhibits, calcium
            signaling via SHP-2
  JOURNAL   J Immunol 172 (10), 5838-5842 (2004)
   PUBMED   15128762
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            On Apr 6, 2023 this sequence version replaced NM_001192001.1.
            
            Sequence Note:.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMN16676785 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-65                JAXUCZ010000009.1  20139869-20139933   c
            66-398              JAXUCZ010000009.1  20139379-20139711   c
            399-552             JAXUCZ010000009.1  20135443-20135596   c
            553-638             JAXUCZ010000009.1  20134797-20134882   c
            639-691             JAXUCZ010000009.1  20134333-20134385   c
            692-1250            JAXUCZ010000009.1  20133193-20133751   c
FEATURES             Location/Qualifiers
     source          1..1250
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q12"
     gene            1..1250
                     /gene="Treml1"
                     /gene_synonym="RGD1565175"
                     /note="triggering receptor expressed on myeloid cells-like
                     1"
                     /db_xref="GeneID:501096"
                     /db_xref="RGD:1565175"
     exon            1..65
                     /gene="Treml1"
                     /gene_synonym="RGD1565175"
                     /inference="alignment:Splign:2.1.0"
     CDS             26..988
                     /gene="Treml1"
                     /gene_synonym="RGD1565175"
                     /note="isoform 1 precursor is encoded by transcript
                     variant 1; trem-like transcript 1 protein"
                     /codon_start=1
                     /product="trem-like transcript 1 protein isoform 1
                     precursor"
                     /protein_id="NP_001178930.1"
                     /db_xref="GeneID:501096"
                     /db_xref="RGD:1565175"
                     /translation="MGCYLLLLLLGLAGQGSADSHPEVLQAAVGSSILVQCHYRLQDV
                     RARKVWCRFVQEGCRPLVTSAVDRRAPESGRIFLTDMGGGLLQVEMVSLQEEDTGKYG
                     CVVEGAAGPQTPHNISLLVLPPVPGPGDGEEAEEEEETYRTRAGSQLEDPSLDPSASA
                     GPHEFRRRENRYLKQCIPLIWGAALLLGLLVVAVVLFAVMARKKGNRLGVCGPSQNTG
                     NSGMDPSSAAHHRSDSGLPSDIPHMRLDSPPSFDSIYTDPSLDPPSRKPPAPPPEPPL
                     PPKVLTSSKPVTYATVVFPGRGKGEKASGEPAQDLPNRQTPPSK"
     exon            66..398
                     /gene="Treml1"
                     /gene_synonym="RGD1565175"
                     /inference="alignment:Splign:2.1.0"
     exon            399..552
                     /gene="Treml1"
                     /gene_synonym="RGD1565175"
                     /inference="alignment:Splign:2.1.0"
     exon            553..638
                     /gene="Treml1"
                     /gene_synonym="RGD1565175"
                     /inference="alignment:Splign:2.1.0"
     exon            639..691
                     /gene="Treml1"
                     /gene_synonym="RGD1565175"
                     /inference="alignment:Splign:2.1.0"
     exon            692..1250
                     /gene="Treml1"
                     /gene_synonym="RGD1565175"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaacctgct actgactgcc tagccatggg ttgctacctg ctgctgctgc tcctgggatt
       61 agcaggccaa ggctcagctg atagtcatcc tgaggttcta caggcagcag tggggtcatc
      121 cattctagtg cagtgccact accggctcca ggatgtgagg gctcgcaagg tgtggtgccg
      181 gttcgtgcag gaaggctgcc gcccactagt gacctcagcg gtggaccgaa gagctccaga
      241 aagcgggcgc atattcctca ctgacatggg tgggggactc ctgcaggtgg aaatggtgag
      301 cctgcaggag gaggacacag ggaagtatgg ttgtgtggtg gagggagctg ccggacccca
      361 gaccccgcat aacatctcgc tgctggtgct tccaccagtt cctggcccag gagacgggga
      421 ggaagcagag gaagaggaag aaacctatag aaccagagcc ggaagtcagc tcgaggaccc
      481 ctccttggac ccttccgcga gtgctggtcc tcacgagttc aggcggcgtg agaacaggta
      541 cctgaagcag tgtatccccc tgatctgggg tgcggcgctc ctgctgggcc tgttggtggt
      601 ggctgtggtg ctgtttgctg tgatggccag aaagaaaggg aacaggcttg gtgtctgtgg
      661 cccatcccag aacaccggaa attcaggcat ggacccttcc tcagcagccc accatagaag
      721 tgactctgga ctcccctcgg acataccaca tatgaggctc gactcaccac cttcctttga
      781 ctccatctac acggaccctt ctcttgatcc accatcaagg aaacccccag ccccaccccc
      841 agagcctcct ctgcctccta aggttctgac ctcctccaag cctgtgacat atgccacagt
      901 tgtcttcccg ggaaggggca aaggtgaaaa agcctccggt gagccggctc aggatctacc
      961 aaacagacaa actccaccca gtaaatgata ctccttagtt tatactcttg ggatcacccc
     1021 tggagaattc tcggcagcct gtccaactag ctctgccttt tatgcccaga gtatgtcagc
     1081 aaccggtgac tcgggggctc tgatctagta tcttggtttg gtggacatag gaagtggtgc
     1141 tcagttatga ttgaggtgtt tgggggaaga attctttcct gctgcttcct ggtgctggat
     1201 ctgctgtcat tacatcttgg gctaaataaa cccagaggat gtggaagctc
//
