LOCUS       NM_001191581             893 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus triggering receptor expressed on myeloid cells 3
            (Trem3), mRNA.
ACCESSION   NM_001191581 XM_002729995
VERSION     NM_001191581.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 893)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            On Jul 17, 2010 this sequence version replaced XM_002729995.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMN06621351, SAMN06680412
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-46                JAXUCZ010000009.1  20257569-20257614   c
            47-397              JAXUCZ010000009.1  20255767-20256117   c
            398-504             JAXUCZ010000009.1  20248291-20248397   c
            505-893             JAXUCZ010000009.1  20247453-20247841   c
FEATURES             Location/Qualifiers
     source          1..893
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q12"
     gene            1..893
                     /gene="Trem3"
                     /gene_synonym="RGD1305477"
                     /note="triggering receptor expressed on myeloid cells 3"
                     /db_xref="GeneID:367215"
                     /db_xref="RGD:1305477"
     CDS             1..558
                     /gene="Trem3"
                     /gene_synonym="RGD1305477"
                     /codon_start=1
                     /product="triggering receptor expressed on myeloid cells 3
                     precursor"
                     /protein_id="NP_001178510.1"
                     /db_xref="GeneID:367215"
                     /db_xref="RGD:1305477"
                     /translation="MSPLLLWLGLLLCVSGLKDGDEEEQKCFLKGENLTLTCPYNIML
                     HSSSLKAWQRVRSHGSPETLVITNTRKPDFNVARAGRYLLEDYPTESIVKVTMTELQK
                     QDVGLYQCVIYLSPNNVVILYHRIRLVWCQEQWVTVMVIVLTCGFILNKGLVFSVLFV
                     LLCKAGPKVLQPSKTSKVQGASEKQ"
     exon            1..46
                     /gene="Trem3"
                     /gene_synonym="RGD1305477"
                     /inference="alignment:Splign:2.1.0"
     exon            47..397
                     /gene="Trem3"
                     /gene_synonym="RGD1305477"
                     /inference="alignment:Splign:2.1.0"
     exon            398..504
                     /gene="Trem3"
                     /gene_synonym="RGD1305477"
                     /inference="alignment:Splign:2.1.0"
     exon            505..893
                     /gene="Trem3"
                     /gene_synonym="RGD1305477"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgtcaccac tgctgctatg gctggggctg ttgctctgtg tttcggggct caaagatgga
       61 gatgaggaag aacagaagtg ttttctgaag ggtgagaacc tgaccctgac ttgtccttac
      121 aacatcatgc tacactcatc cagcctgaag gcctggcaac gggtcagaag ccacggttct
      181 ccagagaccc tggtgatcac aaacaccaga aagccagact tcaatgtggc ccgggctggg
      241 aggtacttgc tggaggatta tcccaccgaa tccatcgtca aggtcaccat gactgaactg
      301 cagaagcaag acgtggggct gtaccagtgt gtgatctacc tctctcctaa caatgttgtc
      361 atcttgtatc atcggattcg cctggtatgg tgccaagagc agtgggtgac agtgatggtg
      421 attgttctga catgtggctt catactgaac aagggcctgg tcttctcagt cctgtttgtc
      481 cttctctgca aagctgggcc taaggtgtta cagccttcca agacatccaa agtacaggga
      541 gcctctgaga aacagtagcc ttcctgctac aagctgtgag cgtaacttcc cttgtctatt
      601 aacagtatgg cagatgttct gcaatgggga aattaagcct ttcttcactc tctttatgaa
      661 ctctgattag tatgtgttac tcccagagga cagctctaag gagagctgtg tagaagaagc
      721 cttatgagac atcagtgaag aatgtgaaac tagaaagatt tgaacctttg atagagcaat
      781 caaacaggac ccacagagaa ttcacttcaa aatcttatct ccgtttctct actgctagcc
      841 aggcctgcca tgctgtggac tggtaaaacc tatatgatat aacctatctc tct
//
