LOCUS       NM_001037981            1845 bp    mRNA    linear   ROD 21-MAR-2023
DEFINITION  Rattus norvegicus T cell receptor associated transmembrane adaptor
            1 (Trat1), mRNA.
ACCESSION   NM_001037981 XM_573276
VERSION     NM_001037981.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1845)
  AUTHORS   Kirchgessner H, Dietrich J, Scherer J, Isomaki P, Korinek V,
            Hilgert I, Bruyns E, Leo A, Cope AP and Schraven B.
  TITLE     The transmembrane adaptor protein TRIM regulates T cell receptor
            (TCR) expression and TCR-mediated signaling via an association with
            the TCR zeta chain
  JOURNAL   J Exp Med 193 (11), 1269-1284 (2001)
   PUBMED   11390434
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC111081.1.
            
            On Dec 23, 2005 this sequence version replaced XM_573276.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC111081.1, CV073315.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN06680412, SAMN06680426
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1845
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q21"
     gene            1..1845
                     /gene="Trat1"
                     /note="T cell receptor associated transmembrane adaptor 1"
                     /db_xref="GeneID:498075"
                     /db_xref="RGD:1563011"
     exon            1..204
                     /gene="Trat1"
                     /inference="alignment:Splign:2.1.0"
     CDS             198..758
                     /gene="Trat1"
                     /codon_start=1
                     /product="T cell receptor associated transmembrane adaptor
                     1"
                     /protein_id="NP_001033070.1"
                     /db_xref="GeneID:498075"
                     /db_xref="RGD:1563011"
                     /translation="MSGNSGCPFFLWGLLAFLGLALVISLIFNVSHYVEKQRRDKMYR
                     YSDDYIPRAEEYYEDAPIYGNLENIIPEPLDEDCYEQMKARPQRSASDAQEVVAPAQV
                     PAEAQICYASLDHSMKGKRRRPRKQNTNLSDRGKDAQDCTMGANVSQNNMVESFPPDN
                     QVVEESIHDDPARLFGLIRAKREPVI"
     exon            205..315
                     /gene="Trat1"
                     /inference="alignment:Splign:2.1.0"
     exon            316..352
                     /gene="Trat1"
                     /inference="alignment:Splign:2.1.0"
     exon            353..411
                     /gene="Trat1"
                     /inference="alignment:Splign:2.1.0"
     exon            412..500
                     /gene="Trat1"
                     /inference="alignment:Splign:2.1.0"
     exon            501..1820
                     /gene="Trat1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaacaaacta cacacaaaag agttaaagaa acagcggaga aaaaaaaaac acctgagtac
       61 agataaagat atatgttggt gctgtgctgt ttctaacata acagaacaac ggtacttaag
      121 gaaaaaagct ggtgggagaa ttcttagcct accaatctgt ttcatggctg cacacaggtt
      181 cttctaaaaa gacaagcatg tcaggaaact ctggatgccc cttcttcctc tggggacttc
      241 tagccttctt gggcttggct ctggtcatat cgttgatctt caatgtttcc cactatgtag
      301 agaagcagcg acgagataaa atgtacagat actctgatga ctacattcca agggctgaag
      361 aatattatga agatgctcca atttatggta acttagaaaa tatcatccct gaaccactgg
      421 acgaagactg ctatgagcaa atgaaagctc gaccacagag atctgcaagt gacgcacagg
      481 aagtggttgc acctgcacag gtacctgctg aagctcaaat ttgctatgcc tcactggatc
      541 acagcatgaa ggggaaacgc agaaggccca ggaaacagaa tactaatttg tcagacagag
      601 gaaaggatgc acaagactgt acaatgggtg ccaacgtttc tcagaacaat atggtagaaa
      661 gttttccacc agataaccag gtagttgagg aaagtattca tgatgatcct gctagactgt
      721 ttggattgat ccgggccaag agagaacctg taatctagct ggactataat tcagctcaat
      781 ggtaacaccc tttgagagat ggttgaaaaa gcaagattac catgtgacac acagggattg
      841 acagagtgac agtctactca tttttcagcg gaatggtacc ttcctttgtc tttatggatc
      901 acatccctac acactaaatc taattataat tagctatatg aatacagtta agaatatcta
      961 aatagaaaaa gtcagataat aaagtccagt ttgcaactta aatgacttga taacaaaatc
     1021 aaaatgaaca gtaataccta ataaggacaa agttttaaaa attcaaagta cataggacac
     1081 cttgaatgaa agagaaaagc ctgtgtctta aaaaattatc aataaaacat gtcttctttc
     1141 atcaatgtga ataagtaatt agaagaaatt tctgattgaa agtacactgc caaggaaagt
     1201 agagtaatcg tgaggagtat tgtttccaag atgtaaatag tattattagt tttaaaattg
     1261 ttataaaaat aaatccatgc tttttacaac aattaaaaag gtaagaactt agaaaattct
     1321 actactcaga gataatcaat atgaataact tctttgtgtt tatggatatt tgactggacg
     1381 taaccatcta tatgtaacag cttttccttt tcctgtttta aattaaacat agagaattat
     1441 gaatattatt taaattctat ttgtgtatca acagagtagg aattatttct actatatatt
     1501 actatattaa aatgtcttca attttgtatt tgatgatgct gggaagcaaa cacggagtct
     1561 ttcagatgaa agacaagtac ctcaccactg agcttcatcc aaactctgct tcataattct
     1621 aacatctgca ttgtatctca tttacgatta aatcagaatc catttaaagg agtttgaaga
     1681 ctacttaaat gaactcaagt ttccatttta tggaatattt atggaatatt ttaatgagaa
     1741 tgttcaaagg catgactgga tacttatcta gtttcttctt tgtgttaagc atttaaaagg
     1801 gaattaaata tttaaagatg aaaaaaaaaa aaaaaaaaaa aaaaa
//
