LOCUS       NP_001029328            1139 aa            linear   ROD 30-MAR-2024
DEFINITION  trafficking protein particle complex subunit 9 [Rattus norvegicus].
ACCESSION   NP_001029328 XP_001068491 XP_235402
VERSION     NP_001029328.1
DBSOURCE    REFSEQ: accession NM_001034156.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 1139)
  AUTHORS   Zhang,Y., Bitner,D., Pontes Filho,A.A., Li,F., Liu,S., Wang,H.,
            Yang,F., Adhikari,S., Gordon,J., Srinivasan,S. and Hu,W.
  TITLE     Expression and function of NIK- and IKK2-binding protein (NIBP) in
            mouse enteric nervous system
  JOURNAL   Neurogastroenterol Motil 26 (1), 77-97 (2014)
   PUBMED   24011459
REFERENCE   2  (residues 1 to 1139)
  AUTHORS   Scrivens,P.J., Noueihed,B., Shahrzad,N., Hul,S., Brunet,S. and
            Sacher,M.
  TITLE     C4orf41 and TTC-15 are mammalian TRAPP components with a role at an
            early stage in ER-to-Golgi trafficking
  JOURNAL   Mol Biol Cell 22 (12), 2083-2093 (2011)
   PUBMED   21525244
REFERENCE   3  (residues 1 to 1139)
  AUTHORS   Mochida,G.H., Mahajnah,M., Hill,A.D., Basel-Vanagaite,L.,
            Gleason,D., Hill,R.S., Bodell,A., Crosier,M., Straussberg,R. and
            Walsh,C.A.
  TITLE     A truncating mutation of TRAPPC9 is associated with
            autosomal-recessive intellectual disability and postnatal
            microcephaly
  JOURNAL   Am J Hum Genet 85 (6), 897-902 (2009)
   PUBMED   20004763
REFERENCE   4  (residues 1 to 1139)
  AUTHORS   Xiong,F., Gao,J., Li,J., Liu,Y., Feng,G., Fang,W., Chang,H.,
            Xie,J., Zheng,H., Li,T. and He,L.
  TITLE     Noncanonical and canonical splice sites: a novel mutation at the
            rare noncanonical splice-donor cut site (IVS4+1A>G) of SEDL causes
            variable splicing isoforms in X-linked spondyloepiphyseal dysplasia
            tarda
  JOURNAL   Eur J Hum Genet 17 (4), 510-516 (2009)
   PUBMED   19002213
REFERENCE   5  (residues 1 to 1139)
  AUTHORS   Hu,W.H., Pendergast,J.S., Mo,X.M., Brambilla,R., Bracchi-Ricard,V.,
            Li,F., Walters,W.M., Blits,B., He,L., Schaal,S.M. and Bethea,J.R.
  TITLE     NIBP, a novel NIK and IKK(beta)-binding protein that enhances
            NF-(kappa)B activation
  JOURNAL   J Biol Chem 280 (32), 29233-29241 (2005)
   PUBMED   15951441
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On or before May 13, 2010 this sequence version replaced
            XP_235402.5, XP_001068491.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMEA5760476, SAMN16676788
                              [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Rattus norvegicus"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     Protein         1..1139
                     /product="trafficking protein particle complex subunit 9"
                     /note="NIK and IKK(beta) binding protein; NIK and
                     IKK{beta} binding protein; trafficking protein particle
                     complex 9"
                     /calculated_mol_wt=127291
     Region          70..1091
                     /region_name="TRAPPC9-Trs120"
                     /note="Transport protein Trs120 or TRAPPC9, TRAPP II
                     complex subunit; pfam08626"
                     /db_xref="CDD:430114"
     CDS             1..1139
                     /gene="Trappc9"
                     /gene_synonym="Nibp; RGD1309461"
                     /coded_by="NM_001034156.2:312..3731"
                     /db_xref="GeneID:315059"
                     /db_xref="RGD:1309461"
ORIGIN      
        1 msvpdymqca edhqtllvvv qavgivseen ffriykrics vsqlsvrdsq ralfiryrhh
       61 yppennewgd fqthrkvvgl ititdcfspk dwpqtfekfh vqkeiygstl ydsrlfvfgl
      121 qgdvaeqprp dvafypnydd cdsvekried fieslfivle skrldratdk sgdkipllcv
      181 pfekkdfvgl dtdsrhykkr cqgrmrkhvg dlclqagmlq dalvhyhmsv ellrsvndfl
      241 wlgaaleglc sasviyhypg gtggktgarr lpgnslpsea anrhrpgalt tnginpdtst
      301 eigrakncls pediidkyke aisyyskykn agvieleacv kavrvlaiqk rgmeaseflq
      361 navyinlrql seeekiqrys ilselyelig fhrksaffkr vaamqcvaps iaepgwracy
      421 kllletlpgy slsldpkdfn kgthrgwaav qmrllhelvy asrrmgnpal svrhlsfllq
      481 tmldflsdqe kkdvtqslen ytakcpgtme pitlpdgltl ppvpftklpi vrcvkllslp
      541 tslrpqkvks llgqsmstks pfiyspiiah nrgeernkki dfqwvqgdvc evqlmvynpm
      601 pfelrvenmg lltsgvefes lpaalslpae sglypvtlvg vpqttgmitv ngyhttvfgv
      661 fsdclldnlp glktsgstve vipalprlqi stslprsahs lqpsagdeia tnvsvqlfng
      721 etqqlaitle niglepleql evtskllttk eklygdflsw kleetlaqfp lqpgkvatft
      781 inikakldfs cqenllqdls ddgisvsgfp lsspfrqvvr prvesrptnp segsktgdlg
      841 hvktleailn fkysggpghv egyyrnlslg lhvevepsvf ftrvstlpat strqchllld
      901 vfnstehelt vcarnnselv lhasecqrma iqvdkfnfes vpespgekgh fanlkqleee
      961 rqeargleis skldirwrip slkrsgeasv egllnqlile hlqlaplqwd vlvdgqpcdc
     1021 evaaacqvgd pvrlevrltn rsprsvgpfa ltvvpfqdhq ngvhnydlhd visfvgsstf
     1081 yldtvqpsgq saclgallfl ytgdfflnir fhedckskel ppswfclpsv hvraleaqa
//
