LOCUS       NM_001106733            1165 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus trafficking protein particle complex subunit 6B
            (Trappc6b), mRNA.
ACCESSION   NM_001106733 XM_001079724 XM_216708
VERSION     NM_001106733.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1165)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473947.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_216708.2, XM_001079724.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ230024.1, BG666461.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132294, SAMD00132300
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q23"
     gene            1..1165
                     /gene="Trappc6b"
                     /gene_synonym="RGD1309325"
                     /note="trafficking protein particle complex subunit 6B"
                     /db_xref="GeneID:299075"
                     /db_xref="RGD:1309325"
     exon            1..259
                     /gene="Trappc6b"
                     /gene_synonym="RGD1309325"
                     /inference="alignment:Splign:2.1.0"
     CDS             179..655
                     /gene="Trappc6b"
                     /gene_synonym="RGD1309325"
                     /note="trafficking protein particle complex 6B"
                     /codon_start=1
                     /product="trafficking protein particle complex subunit 6B"
                     /protein_id="NP_001100203.1"
                     /db_xref="GeneID:299075"
                     /db_xref="RGD:1309325"
                     /translation="MADEALFLLLHNEMVSGVYKSAEQGEVENGRCITKLENMGFRVG
                     QGLIERFTKDTARFKDELDIMKFICKDFWTTVFKKQIDNLRTNHQGIYVLQDNKFRLL
                     IQLSAGKQYLEHASKYLAFTCGLIRGGLSNLGIKSIVTAEVSSMPACKFQVMIQKL"
     exon            260..327
                     /gene="Trappc6b"
                     /gene_synonym="RGD1309325"
                     /inference="alignment:Splign:2.1.0"
     exon            328..445
                     /gene="Trappc6b"
                     /gene_synonym="RGD1309325"
                     /inference="alignment:Splign:2.1.0"
     exon            446..529
                     /gene="Trappc6b"
                     /gene_synonym="RGD1309325"
                     /inference="alignment:Splign:2.1.0"
     exon            530..623
                     /gene="Trappc6b"
                     /gene_synonym="RGD1309325"
                     /inference="alignment:Splign:2.1.0"
     exon            624..1165
                     /gene="Trappc6b"
                     /gene_synonym="RGD1309325"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgtggggtt gtcatagggt ctcaaaggcc cagtggcggc cgccctgggg aggggcgcgg
       61 tccacagcgg ccttaggacc ggggtaggcc gcggcgcaca gcgtgcgacg cggggtaacg
      121 ggaacctcga gtcccgcact aattggagcc gactcggcgc tggagggatc ggcgggaaat
      181 ggcggacgag gcgttgtttt tgcttctcca taacgagatg gtgtccggag tatataagtc
      241 cgccgagcag ggggaagtgg aaaatggacg gtgtattact aagctggaaa acatggggtt
      301 tcgagtggga caaggattga tagaaaggtt tacaaaagat actgcaaggt tcaaggatga
      361 attagacatc atgaagttca tatgtaaaga tttttggact acggtattca agaaacaaat
      421 tgacaatcta aggacaaatc atcagggcat atatgtgctt caggacaaca aatttcgact
      481 actcattcag ctgtctgcag gaaaacagta tttagaacat gcatccaagt atctagcgtt
      541 tacatgtggc ttaatcagag gtggcttgtc aaacttggga ataaaaagta ttgtgacagc
      601 tgaagtatct tcaatgcctg cctgcaaatt ccaggtgatg atacagaagc tgtagagtga
      661 ggtgatggct cctgggcaga gcattgcgcg tcctgatttc accttctcgt tggatatctg
      721 cgttggagca aatcgttagc tctccagagt cactagagca aatcaaagta gatacaggtc
      781 ctttgacata aactaactga actgttcaaa gcaatttcag tgaactaaac gccaagatgc
      841 caggctcttc attttaaaca tctttatttc cgtagtatga taagcattta accatcaatt
      901 gggaagtgaa actcagggtg tgttgaattg ctgtataaaa aagtacgtgt caatcagaat
      961 agtttgtgtt caaatgacca aaatttgttg aagtataaat ctgttttagt tatttaaaac
     1021 aaaccactat gttaaattaa gcttcatttt tattgtattg cttataattt atttctgtca
     1081 agagaactcc tatgcttata taaggatttc atttatacat tgtgtatata tgtgtatata
     1141 taaatacatg cattactgtc taaat
//
