LOCUS       NM_001108850            1227 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus trafficking protein particle complex subunit 5
            (Trappc5), mRNA.
ACCESSION   NM_001108850 XM_001063935 XM_344066
VERSION     NM_001108850.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1227)
  AUTHORS   Scrivens PJ, Noueihed B, Shahrzad N, Hul S, Brunet S and Sacher M.
  TITLE     C4orf41 and TTC-15 are mammalian TRAPP components with a role at an
            early stage in ER-to-Golgi trafficking
  JOURNAL   Mol Biol Cell 22 (12), 2083-2093 (2011)
   PUBMED   21525244
REFERENCE   2  (bases 1 to 1227)
  AUTHORS   Menon S, Cai H, Lu H, Dong G, Cai Y, Reinisch K and Ferro-Novick S.
  TITLE     mBET3 is required for the organization of the TRAPP complexes
  JOURNAL   Biochem Biophys Res Commun 350 (3), 669-677 (2006)
   PUBMED   17027922
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC158788.1.
            
            On Jan 27, 2008 this sequence version replaced NM_001108850.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC158788.1, FQ227574.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12p12"
     gene            1..1227
                     /gene="Trappc5"
                     /gene_synonym="RGD1563971"
                     /note="trafficking protein particle complex subunit 5"
                     /db_xref="GeneID:363858"
                     /db_xref="RGD:1563971"
     exon            1..64
                     /gene="Trappc5"
                     /gene_synonym="RGD1563971"
                     /inference="alignment:Splign:2.1.0"
     exon            65..1219
                     /gene="Trappc5"
                     /gene_synonym="RGD1563971"
                     /inference="alignment:Splign:2.1.0"
     CDS             74..640
                     /gene="Trappc5"
                     /gene_synonym="RGD1563971"
                     /note="trafficking protein particle complex 5"
                     /codon_start=1
                     /product="trafficking protein particle complex subunit 5"
                     /protein_id="NP_001102320.1"
                     /db_xref="GeneID:363858"
                     /db_xref="RGD:1563971"
                     /translation="MEARFTRGKSALLERALVRPRTEVSLSAFALLFSELVQHCQSRV
                     FSVAELQARLAALGRQVGARVLDALVAREKGARRETKVLGALLFVKGAVWKALFGKEA
                     DKLEQANDDARTFYIIEREPLINTYISVPKENSTLNCASFTAGIVEAVLTHSGFPAKV
                     TAHWHKGTTLMIKFEEAVIARDRALEGR"
ORIGIN      
        1 acctttccgg gccggcgcgc acgggcctcg tcttttttct gtgtgtcccg agcagcgttc
       61 ccgggactgc atcatggagg cgcgtttcac acgcgggaag tcggcgctcc tagagcgcgc
      121 actggtgcgg ccccgcactg aggtgagcct gagcgccttc gcccttctct tctccgagct
      181 ggtgcagcac tgtcagagcc gcgttttctc tgtggcagag ctccaggcac gcttggctgc
      241 cctgggccgc caggtgggcg cccgagtcct agatgccctg gtggcccgtg aaaagggtgc
      301 tcggcgtgag accaaggtgc tgggtgcgct gctgttcgtc aagggtgcgg tgtggaaggc
      361 actgttcggc aaggaggcgg acaagctgga gcaggccaac gacgacgccc gcactttcta
      421 catcattgag agggagcctc tcattaacac ctacatctcc gtgcccaagg agaacagcac
      481 gctgaactgt gccagcttca cagcgggcat cgtggaggct gtgctcacgc acagcggctt
      541 ccccgccaaa gttacagcgc actggcacaa ggggaccaca ctcatgatca agtttgaaga
      601 ggctgttatt gcccgagatc gggccctgga gggacgctga ccccacggga cataaaggtt
      661 gagcagatcc cgtttccaag tttgtgttgt gtgttgtgta ggggcgtcag atctgcccat
      721 atcctgatcc tggtccccag tcccagactg agggagtcgg aaggcaaagt tgtcaggcat
      781 aggcggagag taaggaaccg gacattgggc tcacttggcc tgtggctttc agataaggtt
      841 ggaggcttga atgtactggg gaaattggac acctatggaa ttgtcagtgg agcctgcagt
      901 ctggaggggc agggatatga ggctaagagg aaccagggcc tggcaaaatg ccagcgccat
      961 agcctagttt gtagggtgcc ctgggtttga ttccttacgc cacataaaat gggcatagtg
     1021 gtgcagattg tctcatccca gcactaggaa ggtagaggga gaaagatcct aagttcaagg
     1081 ccatcctctg ctaagcaagt ttgagatcag tggtgggagc agaggattct ttcttaaaca
     1141 agtgggaggc aggggtaccc ttccctcaaa gctcagtttt cctcaaatct ccatttgttc
     1201 ttaaaaaaaa aaaaaaaaaa aaaaaaa
//
