LOCUS       NM_001008376            1250 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus trafficking protein particle complex subunit 3
            (Trappc3), mRNA.
ACCESSION   NM_001008376 XM_342917
VERSION     NM_001008376.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1250)
  AUTHORS   Scrivens,P.J., Noueihed,B., Shahrzad,N., Hul,S., Brunet,S. and
            Sacher,M.
  TITLE     C4orf41 and TTC-15 are mammalian TRAPP components with a role at an
            early stage in ER-to-Golgi trafficking
  JOURNAL   Mol Biol Cell 22 (12), 2083-2093 (2011)
   PUBMED   21525244
REFERENCE   2  (bases 1 to 1250)
  AUTHORS   Menon,S., Cai,H., Lu,H., Dong,G., Cai,Y., Reinisch,K. and
            Ferro-Novick,S.
  TITLE     mBET3 is required for the organization of the TRAPP complexes
  JOURNAL   Biochem Biophys Res Commun 350 (3), 669-677 (2006)
   PUBMED   17027922
REFERENCE   3  (bases 1 to 1250)
  AUTHORS   Loh,E., Peter,F., Subramaniam,V.N. and Hong,W.
  TITLE     Mammalian Bet3 functions as a cytosolic factor participating in
            transport from the ER to the Golgi apparatus
  JOURNAL   J Cell Sci 118 (Pt 6), 1209-1222 (2005)
   PUBMED   15728249
  REMARK    GeneRIF: Bet3 functions as a cytosolic factor participating in
            transport from the ER to the Golgi apparatus
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC086377.1.
            
            On Dec 16, 2004 this sequence version replaced XM_342917.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC086377.1, EV779073.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1250
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..1250
                     /gene="Trappc3"
                     /note="trafficking protein particle complex subunit 3"
                     /db_xref="GeneID:362599"
                     /db_xref="RGD:1309135"
     exon            1..110
                     /gene="Trappc3"
                     /inference="alignment:Splign:2.1.0"
     CDS             69..611
                     /gene="Trappc3"
                     /note="BET3 homolog; trafficking protein particle complex
                     3"
                     /codon_start=1
                     /product="trafficking protein particle complex subunit 3"
                     /protein_id="NP_001008377.1"
                     /db_xref="GeneID:362599"
                     /db_xref="RGD:1309135"
                     /translation="MSRQANRGTESKKMSSELFTLTYGALVTQLCKDYENDEDVNKQL
                     DRMGYNIGVRLIEDFLARSNVGRCHDFRETADVIAKVAFKMYLGITPSITNWSPAGDE
                     FSLILENNPLVDFVELPDNHSALIYSNLLCGVLRGALEMVQMAVEAKFVQDTLKGDGV
                     TEIRMRFIRRIEDNLPAGEE"
     exon            111..208
                     /gene="Trappc3"
                     /inference="alignment:Splign:2.1.0"
     exon            209..308
                     /gene="Trappc3"
                     /inference="alignment:Splign:2.1.0"
     exon            309..491
                     /gene="Trappc3"
                     /inference="alignment:Splign:2.1.0"
     exon            492..1224
                     /gene="Trappc3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcttctcccg gggtctggga tctgggttgt gaggaggtga ggtgaggcag cactgagcgg
       61 tgggcaccat gtcgaggcag gcgaaccgtg gcaccgagag caagaaaatg agttcagagc
      121 tgttcacgct gacctatggg gcacttgtca cccagctgtg taaggactat gaaaatgacg
      181 aggacgtgaa taagcagctg gacagaatgg gctataacat tggagtccga ctgattgaag
      241 attttttggc aaggtcaaat gttggaagat gtcatgactt tcgggaaact gctgatgtca
      301 ttgctaaggt ggcgttcaag atgtacctgg gcatcactcc aagcatcacc aactggagcc
      361 cagctggaga tgagttctcc ctcatcttgg aaaataaccc cttggtggac tttgtggagc
      421 tccccgataa ccactcagcc ctcatttact ccaatctcct gtgtggggtg ttgcggggag
      481 ccctggagat ggtccagatg gctgtggagg ccaagtttgt ccaggacact ctgaagggag
      541 atggcgtgac agaaatcagg atgaggttca tcaggcggat tgaagacaat ctcccagctg
      601 gagaagagta agcatctcta ggacttgggc agccaagagg agcgcctgca gggatgagaa
      661 cagcaggcgc tcgcctcctc tgcccctgga gctcagtgac ttttaaactg gtgttatata
      721 ttcttctaac cgtatttcca tcctccacgc taataaagag caggctgaca gtctgtttgc
      781 cccacaagta tgtacctcag aaggggggtt ctttgttccg tttcccttca gaagggcagg
      841 attacttgcc cttggttgga ctaaaagagc tcaaatcatt ttacattcct gtgaattttc
      901 caaagccaac ccactttgac cccattaagg gacaagcctg atacatctgc gccttcatga
      961 cgccattggc aaatggctgt agggaatctt gggttgtgga ggggagggag agcgctggga
     1021 aggggtggat aagaattgtt ggctgtagtg acacactgta gtcttgccag gccacggaag
     1081 ccagtcatgc cggaaacacc ggcttctggg aagccgccca ggtctcattc ctccctgctg
     1141 tttggaggca gcatctcctc tttttatgga gggcccgtcc ttttttctta caaattcttc
     1201 aataaagaca cattcttgag tgaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//
