LOCUS       NM_001024965            1474 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus trafficking protein particle complex subunit 2
            (Trappc2), mRNA.
ACCESSION   NM_001024965 XM_576952
VERSION     NM_001024965.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1474)
  AUTHORS   Milev,M.P., Hasaj,B., Saint-Dic,D., Snounou,S., Zhao,Q. and
            Sacher,M.
  TITLE     TRAMM/TrappC12 plays a role in chromosome congression, kinetochore
            stability, and CENP-E recruitment
  JOURNAL   J Cell Biol 209 (2), 221-234 (2015)
   PUBMED   25918224
REFERENCE   2  (bases 1 to 1474)
  AUTHORS   Scrivens,P.J., Noueihed,B., Shahrzad,N., Hul,S., Brunet,S. and
            Sacher,M.
  TITLE     C4orf41 and TTC-15 are mammalian TRAPP components with a role at an
            early stage in ER-to-Golgi trafficking
  JOURNAL   Mol Biol Cell 22 (12), 2083-2093 (2011)
   PUBMED   21525244
REFERENCE   3  (bases 1 to 1474)
  AUTHORS   Menon,S., Cai,H., Lu,H., Dong,G., Cai,Y., Reinisch,K. and
            Ferro-Novick,S.
  TITLE     mBET3 is required for the organization of the TRAPP complexes
  JOURNAL   Biochem Biophys Res Commun 350 (3), 669-677 (2006)
   PUBMED   17027922
REFERENCE   4  (bases 1 to 1474)
  AUTHORS   Fan,L., Yu,W. and Zhu,X.
  TITLE     Interaction of Sedlin with chloride intracellular channel proteins
  JOURNAL   FEBS Lett 540 (1-3), 77-80 (2003)
   PUBMED   12681486
REFERENCE   5  (bases 1 to 1474)
  AUTHORS   Ghosh,A.K., Majumder,M., Steele,R., White,R.A. and Ray,R.B.
  TITLE     A novel 16-kilodalton cellular protein physically interacts with
            and antagonizes the functional activity of c-myc promoter-binding
            protein 1
  JOURNAL   Mol Cell Biol 21 (2), 655-662 (2001)
   PUBMED   11134351
REFERENCE   6  (bases 1 to 1474)
  AUTHORS   Gedeon,A.K., Colley,A., Jamieson,R., Thompson,E.M., Rogers,J.,
            Sillence,D., Tiller,G.E., Mulley,J.C. and Gecz,J.
  TITLE     Identification of the gene (SEDL) causing X-linked
            spondyloepiphyseal dysplasia tarda
  JOURNAL   Nat Genet 22 (4), 400-404 (1999)
   PUBMED   10431248
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC091429.1.
            
            On or before Apr 26, 2006 this sequence version replaced
            XM_576952.1, XM_213295.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FN802820.1, CV110307.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760434, SAMN12840110
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1474
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq13"
     gene            1..1474
                     /gene="Trappc2"
                     /gene_synonym="RGD1306925"
                     /note="trafficking protein particle complex subunit 2"
                     /db_xref="GeneID:501550"
                     /db_xref="RGD:1306925"
     exon            1..14
                     /gene="Trappc2"
                     /gene_synonym="RGD1306925"
                     /inference="alignment:Splign:2.1.0"
     exon            15..85
                     /gene="Trappc2"
                     /gene_synonym="RGD1306925"
                     /inference="alignment:Splign:2.1.0"
     exon            86..197
                     /gene="Trappc2"
                     /gene_synonym="RGD1306925"
                     /inference="alignment:Splign:2.1.0"
     CDS             105..527
                     /gene="Trappc2"
                     /gene_synonym="RGD1306925"
                     /note="sedlin; trafficking protein particle complex
                     protein 2; trafficking protein particle complex 2"
                     /codon_start=1
                     /product="trafficking protein particle complex subunit 2"
                     /protein_id="NP_001020136.1"
                     /db_xref="GeneID:501550"
                     /db_xref="RGD:1306925"
                     /translation="MSGSFYFVIVGHHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHA
                     ALDLVDENMWLSNNMYLKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDV
                     YDLYIKFAMNPFYEPNSPIRSSAFDRKVQFLGKKHLLS"
     exon            198..342
                     /gene="Trappc2"
                     /gene_synonym="RGD1306925"
                     /inference="alignment:Splign:2.1.0"
     exon            343..428
                     /gene="Trappc2"
                     /gene_synonym="RGD1306925"
                     /inference="alignment:Splign:2.1.0"
     exon            429..1450
                     /gene="Trappc2"
                     /gene_synonym="RGD1306925"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgcaggttcg cgaggaaaca cattccagat ttctttggat gtcattgatt ttcctgtgaa
       61 tcagcagaag acctagaggg gcttggagct acatattgaa gacaatgtct ggaagcttct
      121 actttgtaat tgttggccac catgataatc cagtttttga aatggaattt ttgccacctg
      181 ggaaagcaga atccaaagat gatcaccgtc atctgaacca gtttatagct catgctgctc
      241 ttgaccttgt ggatgaaaat atgtggcttt ctaacaacat gtacttaaaa actgtggaca
      301 aatttaatga gtggtttgtg tcagcatttg tcactgcagg gcatatgaga tttattatgc
      361 ttcatgatgt gaggcaagaa gatggaataa agaacttctt tactgatgtc tatgatttgt
      421 atataaagtt tgcaatgaat ccattttatg aacccaattc tcctattcga tcaagtgcat
      481 ttgacagaaa agttcagttt cttgggaaga aacacctttt aagctaaatg gagaaactct
      541 gcaataagct gtatcatcgt ggggtgtgct caggagtgtg tgttctgtaa gtaatttgaa
      601 attgcctgga aaacgttccc ttaaaattgt acattgtttt catattgact gtcattagca
      661 ttgatatttg cttgtggaca atgttattta caaacagttc tgtaccagta attttgaaca
      721 cttttattta tttaaaagct tgagaagact cttgcctttc ctaagataat ttgatattaa
      781 tttattaatt caaaagcata ttatgtcata gttaatattt gttagaatga tttaagactg
      841 aaaagttctg gagatgaatg aaattgagtt atttacacat ttagagatgt tcttttaaaa
      901 tgcatagtac actgcagtac caagaagctg aagcagaaag cccatgccag tgctacccgc
      961 ttgcctccct ccaccagagg ctgtgaataa tcacccggct gtaactctaa acccctagac
     1021 ctatatatgc tggaccagtt ccaggccatg gcaaagtatg ttgcctctgt caccttatat
     1081 tctagtgttt cctttctctt agtaaactaa aggtttactt tatttaaact tgttaatatc
     1141 tgtatttgaa aaaatgttat aatactgatt gggtattgct aataaaagct tgggttatac
     1201 tgacacttgc acttaactaa cctttttgct atctatatac aggatgcgag gtggcagatg
     1261 tggcctcttg tcttagatat ggtggtgtta cagtagtaga tatgcatgaa aaagcaaacc
     1321 agattttcat gtgtacactg gaaaaatttc attctaacat ttgagtaagc acttctaaac
     1381 tttcttgtat tctttggtga cattgttact atcacttttt tttatttctt aaataaagat
     1441 ttatatccaa aaaaaaaaaa aaaaaaaaaa aaaa
//
