LOCUS       NM_001014132            1888 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus TRAF3 interacting protein 3 (Traf3ip3), mRNA.
ACCESSION   NM_001014132 XM_341175
VERSION     NM_001014132.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1888)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC089843.1.
            
            [WARNING] On Apr 29, 2024 this sequence was replaced by
            NM_001014132.2.
            
            On Apr 20, 2005 this sequence version replaced XM_341175.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC089843.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132291,
                                           SAMD00132293 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1888
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q27"
     gene            1..1888
                     /gene="Traf3ip3"
                     /gene_synonym="RGD1304848"
                     /note="TRAF3 interacting protein 3"
                     /db_xref="GeneID:360900"
                     /db_xref="RGD:1304848"
     exon            1..40
                     /gene="Traf3ip3"
                     /gene_synonym="RGD1304848"
                     /inference="alignment:Splign:2.1.0"
     exon            41..440
                     /gene="Traf3ip3"
                     /gene_synonym="RGD1304848"
                     /inference="alignment:Splign:2.1.0"
     CDS             99..1640
                     /gene="Traf3ip3"
                     /gene_synonym="RGD1304848"
                     /codon_start=1
                     /product="TRAF3-interacting JNK-activating modulator"
                     /protein_id="NP_001014154.1"
                     /db_xref="GeneID:360900"
                     /db_xref="RGD:1304848"
                     /translation="MIGSNSRSFPSLARWAESYEAKCERRQEARESLRRRRNETTCRQ
                     PGKVLRTQHKEHLQRARQLQFLRRRNLEEEKKGQSREQRPSSKTDGGTGQVSILKKSG
                     PGANRTSFPGQQETGICSEVFPALCHPPSGIQRDLDDHHVSHGRAFPPQDSDTMKPHR
                     HHQGTQTKAEEAWPTRKNDASQQTNCGVAVLDKDIIQLSEYLKEALQRELILKQKMVI
                     LQDLLPALIRASDSSWKGQLNEDKLKGKLRSLENQLYTCLQKHSPWGMKKVLLDMENQ
                     RSSYEQKAKASLQKVLEEKMCAEQQLQRAQLSLAVAEQKCQEWKSQYEALKEDWRTLG
                     DQHRELESQLHVLQSKLQGADSRDSQMSQALRLLENEHQELQTKLESLQGDREQQSSE
                     TQDLQDQLKKSEEERQALMSRVQQLQSLLQNQSLQLREQEKLLKKDQGLPVWNPKLSF
                     DEVKPEGTGKEKVEELRDQLQKETYQLQAKEKERQCSQWLPALVVVIATALAVFLANK
                     GNLVI"
     exon            441..588
                     /gene="Traf3ip3"
                     /gene_synonym="RGD1304848"
                     /inference="alignment:Splign:2.1.0"
     exon            589..652
                     /gene="Traf3ip3"
                     /gene_synonym="RGD1304848"
                     /inference="alignment:Splign:2.1.0"
     exon            653..677
                     /gene="Traf3ip3"
                     /gene_synonym="RGD1304848"
                     /inference="alignment:Splign:2.1.0"
     exon            678..707
                     /gene="Traf3ip3"
                     /gene_synonym="RGD1304848"
                     /inference="alignment:Splign:2.1.0"
     exon            708..803
                     /gene="Traf3ip3"
                     /gene_synonym="RGD1304848"
                     /inference="alignment:Splign:2.1.0"
     exon            804..875
                     /gene="Traf3ip3"
                     /gene_synonym="RGD1304848"
                     /inference="alignment:Splign:2.1.0"
     exon            876..1016
                     /gene="Traf3ip3"
                     /gene_synonym="RGD1304848"
                     /inference="alignment:Splign:2.1.0"
     exon            1017..1154
                     /gene="Traf3ip3"
                     /gene_synonym="RGD1304848"
                     /inference="alignment:Splign:2.1.0"
     exon            1155..1290
                     /gene="Traf3ip3"
                     /gene_synonym="RGD1304848"
                     /inference="alignment:Splign:2.1.0"
     exon            1291..1353
                     /gene="Traf3ip3"
                     /gene_synonym="RGD1304848"
                     /inference="alignment:Splign:2.1.0"
     exon            1354..1410
                     /gene="Traf3ip3"
                     /gene_synonym="RGD1304848"
                     /inference="alignment:Splign:2.1.0"
     exon            1411..1547
                     /gene="Traf3ip3"
                     /gene_synonym="RGD1304848"
                     /inference="alignment:Splign:2.1.0"
     exon            1548..1855
                     /gene="Traf3ip3"
                     /gene_synonym="RGD1304848"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggctctcccg agacacttga gacagagcct gggacctgag atccaagcag ctgtctaagg
       61 aaagtaagcc aagcacaaca ggtgctcggg aggccaccat gatcggctca aactccaggt
      121 ccttccctag cttggctcgg tgggccgaga gctatgaggc caagtgtgag cggcgtcagg
      181 aggcccgaga aagcctccgc cgccgccgca atgagaccac ctgccgccag ccagggaagg
      241 tgctgcggac tcaacacaag gaacaccttc agcgagctcg gcagctacag ttcctcagaa
      301 ggagaaacct ggaagaagag aagaaaggtc aatccaggga gcaaaggccc tccagcaaga
      361 cagatggagg aacaggccaa gtgtctatcc tcaagaagtc cgggcctgga gccaacagga
      421 cctctttccc tggacagcag gaaacaggga tatgctccga ggttttccca gccttgtgtc
      481 atcccccctc aggcatccag agagatctgg atgaccacca tgtttcccat ggaagagcct
      541 ttccaccaca ggactctgac accatgaagc cacacagaca ccaccagggt actcagacaa
      601 aggcagaaga ggcatggcca acaagaaaga atgatgccag tcagcaaacc aactgtggag
      661 ttgccgtcct agacaaggac atcattcaac tctctgaata cctcaaagaa gccttacaaa
      721 gggagctgat cctaaaacaa aaaatggtga ttctccagga cctcctgcct gccctgatcc
      781 gggcctctga cagctcttgg aagggacagc ttaatgaaga caaactgaag ggcaaactaa
      841 gatccctaga aaaccagctc tacacctgcc tgcagaaaca ctccccctgg gggatgaaaa
      901 aggtactgct ggacatggag aaccagagga gcagttacga gcagaaggct aaggcatcac
      961 tgcagaaagt gctggaggag aaaatgtgtg ccgagcagca actgcagagg gcgcagctgt
     1021 ccctggctgt ggcagagcag aagtgtcagg agtggaagag tcagtacgag gctcttaagg
     1081 aggactggag gaccctaggg gaccagcaca gggagctgga gagccaactg catgtgcttc
     1141 agtctaaact acagggagca gacagcagag actcacagat gagccaggcc ctacgacttt
     1201 tagaaaatga acaccaggag ctgcagacca aactcgagag cctgcaggga gaccgagagc
     1261 agcagagctc tgaaacccag gacctacaag atcaactaaa gaagtccgag gaggagagac
     1321 aagccctgat gagcagagtt caacagctac agagtctgct tcagaatcaa tccttacaac
     1381 ttcgagaaca ggagaagctc ttaaagaaag atcagggttt gcctgtgtgg aatccaaagc
     1441 tctcctttga tgaagtgaag cctgagggta caggaaagga gaaagtcgag gagctcagag
     1501 accaactaca aaaggagaca tatcagctcc aggccaagga aaaggagcgg cagtgtagcc
     1561 aatggctccc agcgctggtg gtggtgattg ctacagcact ggccgtgttc ctggcaaaca
     1621 aaggcaacct ggtcatctga agaactcccg gcatctatct gaagtaaaat tcagaagcaa
     1681 acaactccat gaaaaaactt gaggtttggt actttatagc ttaggttttc cctccaaatg
     1741 aatctggacc cctagcttta tttttcccac catgctgtaa ataaactttg cctcacaaga
     1801 ctgctcttta gagctgtgta ttcctgagaa gtaaaccaca agtgtggccc ttaaaaaaaa
     1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//
